RNA–Protein interactions for RNA: ENST00000240185.7

TARDBP-201, Transcript of TAR DNA binding protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TARDBP, Length 5,367 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-201ENST00000240185 MSH6P52701 1360 aa15.12■□□□□ 0.01
TARDBP-201ENST00000240185 OCA2Q04671 838 aa15.12■□□□□ 0.01
TARDBP-201ENST00000240185 CCDC92Q53HC0 331 aaPredicted RBP15.12■□□□□ 0.01
TARDBP-201ENST00000240185 NME8Q8N427 588 aa15.12■□□□□ 0.01
TARDBP-201ENST00000240185 FBXO18Q8NFZ0 1043 aa15.12■□□□□ 0.01
TARDBP-201ENST00000240185 FGD4Q96M96 766 aa15.12■□□□□ 0.01
TARDBP-201ENST00000240185 SAP30BPQ9UHR5 308 aaKnown RBP15.12■□□□□ 0.01
TARDBP-201ENST00000240185 ZFXP17010 805 aaPredicted RBP15.11■□□□□ 0.01
TARDBP-201ENST00000240185 CYP2J2P51589 502 aa15.11■□□□□ 0.01
TARDBP-201ENST00000240185 ME3Q16798 604 aa15.11■□□□□ 0.01
TARDBP-201ENST00000240185 HP1BP3Q5SSJ5 553 aaPredicted RBP15.11■□□□□ 0.01
TARDBP-201ENST00000240185 KAZNQ674X7 775 aa15.11■□□□□ 0.01
TARDBP-201ENST00000240185 CDAN1Q8IWY9 1227 aa15.11■□□□□ 0.01
TARDBP-201ENST00000240185 CARD10Q9BWT7 1032 aa15.11■□□□□ 0.01
TARDBP-201ENST00000240185 NOVA2Q9UNW9 492 aaKnown RBP15.11■□□□□ 0.01
TARDBP-201ENST00000240185 IRS4O14654 1257 aaPredicted RBP15.11■□□□□ 0.01
TARDBP-201ENST00000240185 DHX9Q08211 1270 aaKnown RBP15.11■□□□□ 0.01
TARDBP-201ENST00000240185 CASP8Q14790 479 aa15.11■□□□□ 0.01
TARDBP-201ENST00000240185 KIF22Q14807 665 aa15.11■□□□□ 0.01
TARDBP-201ENST00000240185 NT5C3AQ9H0P0 336 aa15.11■□□□□ 0.01
TARDBP-201ENST00000240185 VPS54Q9P1Q0 977 aa15.11■□□□□ 0.01
TARDBP-201ENST00000240185 AOX1Q06278 1338 aa15.11■□□□□ 0.01
TARDBP-201ENST00000240185 EIF6P56537 245 aaKnown RBP15.11■□□□□ 0.01
TARDBP-201ENST00000240185 TMED2Q15363 201 aa15.11■□□□□ 0.01
TARDBP-201ENST00000240185 GRIN2BQ13224 1484 aa15.11■□□□□ 0.01
TARDBP-201ENST00000240185 PRPF6O94906 941 aaKnown RBP15.11■□□□□ 0.01
TARDBP-201ENST00000240185 MSH2P43246 934 aa15.11■□□□□ 0.01
TARDBP-201ENST00000240185 SLCO1A2P46721 670 aa15.11■□□□□ 0.01
TARDBP-201ENST00000240185 CYP4F22Q6NT55 531 aa15.11■□□□□ 0.01
TARDBP-201ENST00000240185 ZC3H12CQ9C0D7 883 aaKnown RBP15.11■□□□□ 0.01
TARDBP-201ENST00000240185 hCG_1642624A0A1W2PR95 340 aa15.1■□□□□ 0.01
TARDBP-201ENST00000240185 STAM2O75886 525 aa15.1■□□□□ 0.01
TARDBP-201ENST00000240185 GNPTABQ3T906 1256 aa15.1■□□□□ 0.01
TARDBP-201ENST00000240185 DBNDD2Q9BQY9 259 aa15.1■□□□□ 0.01
TARDBP-201ENST00000240185 CMA1P23946 247 aa15.1■□□□□ 0.01
TARDBP-201ENST00000240185 DEUP1Q05D60 604 aa15.1■□□□□ 0.01
TARDBP-201ENST00000240185 PALMDQ9NP74 551 aa15.1■□□□□ 0.01
TARDBP-201ENST00000240185 TRPC5Q9UL62 973 aaPredicted RBP15.1■□□□□ 0.01
TARDBP-201ENST00000240185 NSFL1CQ9UNZ2 370 aaKnown RBP15.1■□□□□ 0.01
TARDBP-201ENST00000240185 PNMA6AP0CW24 399 aaPredicted RBP15.1■□□□□ 0.01
TARDBP-201ENST00000240185 RAP1GDS1P52306 607 aa15.1■□□□□ 0.01
TARDBP-201ENST00000240185 YWHAEP62258 255 aaKnown RBP15.1■□□□□ 0.01
TARDBP-201ENST00000240185 TNNI3KQ59H18 835 aa15.1■□□□□ 0.01
TARDBP-201ENST00000240185 USP6NLQ92738 828 aa15.1■□□□□ 0.01
TARDBP-201ENST00000240185 FPGT-TNNI3KV9GXZ4 949 aa15.1■□□□□ 0.01
TARDBP-201ENST00000240185 SPDYE16A6NNV3 312 aaPredicted RBP15.1■□□□□ 0.01
TARDBP-201ENST00000240185 H0Y3Z8 333 aa15.1■□□□□ 0.01
TARDBP-201ENST00000240185 CDC25BP30305 580 aa15.1■□□□□ 0.01
TARDBP-201ENST00000240185 SPDYE2Q495Y8 402 aa15.1■□□□□ 0.01
TARDBP-201ENST00000240185 EIF3CLB5ME19 914 aaKnown RBP15.09■□□□□ 0.01
TARDBP-201ENST00000240185 CFLARO15519 480 aa15.09■□□□□ 0.01
TARDBP-201ENST00000240185 TRIM37O94972 964 aa15.09■□□□□ 0.01
TARDBP-201ENST00000240185 FNBP4Q8N3X1 1017 aaPredicted RBP15.09■□□□□ 0.01
TARDBP-201ENST00000240185 CACTINQ8WUQ7 758 aaKnown RBP15.09■□□□□ 0.01
TARDBP-201ENST00000240185 EIF3CQ99613 913 aaKnown RBP15.09■□□□□ 0.01
TARDBP-201ENST00000240185 IRAK4Q9NWZ3 460 aa15.09■□□□□ 0.01
TARDBP-201ENST00000240185 ADAMTS2O95450 1211 aa15.09■□□□□ 0.01
TARDBP-201ENST00000240185 PDE6CP51160 858 aa15.09■□□□□ 0.01
TARDBP-201ENST00000240185 FBXO38Q6PIJ6 1188 aa15.09■□□□□ 0.01
TARDBP-201ENST00000240185 RAPH1Q70E73 1250 aa15.09■□□□□ 0.01
TARDBP-201ENST00000240185 TDRD7Q8NHU6 1098 aaKnown RBP15.09■□□□□ 0.01
TARDBP-201ENST00000240185 GADD45GIP1Q8TAE8 222 aaPredicted RBP15.09■□□□□ 0.01
TARDBP-201ENST00000240185 TM6SF1Q9BZW5 370 aa15.09■□□□□ 0.01
TARDBP-201ENST00000240185 C2orf54Q08AI8 447 aa15.09■□□□□ 0.01
TARDBP-201ENST00000240185 SEPT2Q15019 361 aa15.09■□□□□ 0.01
TARDBP-201ENST00000240185 NBPF9Q3BBW0 867 aa15.09■□□□□ 0.01
TARDBP-201ENST00000240185 ALS2CLQ60I27 953 aa15.09■□□□□ 0.01
TARDBP-201ENST00000240185 GDAP1Q8TB36 358 aa15.09■□□□□ 0.01
TARDBP-201ENST00000240185 SATB2Q9UPW6 733 aa15.09■□□□□ 0.01
TARDBP-201ENST00000240185 URB2Q14146 1524 aaKnown RBP15.09■□□□□ 0.01
TARDBP-201ENST00000240185 HNRNPCP07910 306 aaKnown RBP eCLIP15.09■□□□□ 0.01
TARDBP-201ENST00000240185 ART3Q13508 389 aa15.09■□□□□ 0.01
TARDBP-201ENST00000240185 AKAP4Q5JQC9 854 aa15.09■□□□□ 0.01
TARDBP-201ENST00000240185 SERPINI1Q99574 410 aa15.09■□□□□ 0.01
TARDBP-201ENST00000240185 SH2D4AQ9H788 454 aa15.09■□□□□ 0.01
TARDBP-201ENST00000240185 SPC25Q9HBM1 224 aa15.09■□□□□ 0.01
TARDBP-201ENST00000240185 TBK1Q9UHD2 729 aa15.09■□□□□ 0.01
TARDBP-201ENST00000240185 ARHGEF9O43307 516 aa15.08■□□□□ 0.01
TARDBP-201ENST00000240185 SPAG7O75391 227 aa15.08■□□□□ 0.01
TARDBP-201ENST00000240185 PDHA1P08559 390 aa15.08■□□□□ 0.01
TARDBP-201ENST00000240185 COPB1P53618 953 aaKnown RBP15.08■□□□□ 0.01
TARDBP-201ENST00000240185 ARMC2Q8NEN0 867 aa15.08■□□□□ 0.01
TARDBP-201ENST00000240185 MTMR6Q9Y217 621 aa15.08■□□□□ 0.01
TARDBP-201ENST00000240185 ZNF711Q9Y462 761 aa15.08■□□□□ 0.01
TARDBP-201ENST00000240185 BZW2Q9Y6E2 419 aaKnown RBP15.08■□□□□ 0.01
TARDBP-201ENST00000240185 H7C0C1 242 aa15.08■□□□□ 0
TARDBP-201ENST00000240185 RAPGEF3O95398 923 aa15.08■□□□□ 0
TARDBP-201ENST00000240185 ATP5OP48047 213 aa15.08■□□□□ 0
TARDBP-201ENST00000240185 WARS2Q9UGM6 360 aaKnown RBP15.08■□□□□ 0
TARDBP-201ENST00000240185 hCG_2014768A0A024R1R8 64 aa15.08■□□□□ 0
TARDBP-201ENST00000240185 LMNAP02545 664 aaKnown RBP15.08■□□□□ 0
TARDBP-201ENST00000240185 MAP3K7CLP57077 242 aa15.08■□□□□ 0
TARDBP-201ENST00000240185 SKOR1P84550 965 aa15.08■□□□□ 0
TARDBP-201ENST00000240185 MESDQ14696 234 aa15.08■□□□□ 0
TARDBP-201ENST00000240185 DENND2AQ9ULE3 1009 aa15.08■□□□□ 0
TARDBP-201ENST00000240185 MYCLP12524 364 aaPredicted RBP15.08■□□□□ 0
TARDBP-201ENST00000240185 GOLGA8FQ08AF8 430 aa15.08■□□□□ 0
TARDBP-201ENST00000240185 GOLGA8DPQ0D2H9 430 aa15.08■□□□□ 0
TARDBP-201ENST00000240185 GPBP1Q86WP2 473 aa15.08■□□□□ 0
TARDBP-201ENST00000240185 HIPK4Q8NE63 616 aa15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms