RNA–Protein interactions for RNA: ENST00000238616.9

NEK9-201, Transcript of NIMA related kinase 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEK9, Length 8,310 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-201ENST00000238616 PDZD4Q76G19 769 aaPredicted RBP14.45□□□□□ -0.1
NEK9-201ENST00000238616 CABP7Q86V35 215 aa14.45□□□□□ -0.1
NEK9-201ENST00000238616 ZBED2Q9BTP6 218 aa14.45□□□□□ -0.1
NEK9-201ENST00000238616 TTC41PQ6P2S7 1318 aa14.45□□□□□ -0.1
NEK9-201ENST00000238616 POC1B-GALNT4F8VUJ3 575 aa14.45□□□□□ -0.1
NEK9-201ENST00000238616 PPFIA4O75335 1185 aa14.45□□□□□ -0.1
NEK9-201ENST00000238616 STAT1P42224 750 aa14.45□□□□□ -0.1
NEK9-201ENST00000238616 RASSF4Q9H2L5 321 aa14.45□□□□□ -0.1
NEK9-201ENST00000238616 RAD50Q92878 1312 aa14.45□□□□□ -0.1
NEK9-201ENST00000238616 BLVRAP53004 296 aa14.45□□□□□ -0.1
NEK9-201ENST00000238616 ATP8B2P98198 1209 aa14.45□□□□□ -0.1
NEK9-201ENST00000238616 H3BRJ5 948 aa14.45□□□□□ -0.1
NEK9-201ENST00000238616 RPS6KB1P23443 525 aa14.45□□□□□ -0.1
NEK9-201ENST00000238616 TRIM59Q8IWR1 403 aa14.45□□□□□ -0.1
NEK9-201ENST00000238616 PPM1KQ8N3J5 372 aa14.45□□□□□ -0.1
NEK9-201ENST00000238616 MMTAG2Q9BU76 263 aaKnown RBP14.45□□□□□ -0.1
NEK9-201ENST00000238616 DDX25Q9UHL0 483 aaKnown RBP14.45□□□□□ -0.1
NEK9-201ENST00000238616 PMLP29590 882 aa14.44□□□□□ -0.1
NEK9-201ENST00000238616 ANO4Q32M45 955 aa14.44□□□□□ -0.1
NEK9-201ENST00000238616 MAP3K21Q5TCX8 1036 aa14.44□□□□□ -0.1
NEK9-201ENST00000238616 KLHDC4Q8TBB5 520 aa14.44□□□□□ -0.1
NEK9-201ENST00000238616 SLF1Q9BQI6 1058 aa14.44□□□□□ -0.1
NEK9-201ENST00000238616 KRT82Q9NSB4 513 aa14.44□□□□□ -0.1
NEK9-201ENST00000238616 MAGI1Q96QZ7 1491 aaPredicted RBP14.44□□□□□ -0.1
NEK9-201ENST00000238616 MAP3K5Q99683 1374 aa14.44□□□□□ -0.1
NEK9-201ENST00000238616 CTNNA1P35221 906 aaKnown RBP14.44□□□□□ -0.1
NEK9-201ENST00000238616 POLA2Q14181 598 aa14.44□□□□□ -0.1
NEK9-201ENST00000238616 SUPT20HQ8NEM7 779 aa14.44□□□□□ -0.1
NEK9-201ENST00000238616 NLRP7Q8WX94 980 aa14.44□□□□□ -0.1
NEK9-201ENST00000238616 EEF1GP26641 437 aaKnown RBP14.44□□□□□ -0.1
NEK9-201ENST00000238616 RSBN1LQ6PCB5 846 aaPredicted RBP14.44□□□□□ -0.1
NEK9-201ENST00000238616 TTC1Q99614 292 aa14.44□□□□□ -0.1
NEK9-201ENST00000238616 PCDHA12Q9UN75 941 aa14.44□□□□□ -0.1
NEK9-201ENST00000238616 CCNYQ8ND76 341 aa14.44□□□□□ -0.1
NEK9-201ENST00000238616 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.44□□□□□ -0.1
NEK9-201ENST00000238616 HMGB1P1B2RPK0 211 aaPredicted RBP14.44□□□□□ -0.1
NEK9-201ENST00000238616 ATP1A2P50993 1020 aa14.44□□□□□ -0.1
NEK9-201ENST00000238616 DNAAF3Q8N9W5 541 aa14.44□□□□□ -0.1
NEK9-201ENST00000238616 IFT122Q9HBG6 1241 aa14.44□□□□□ -0.1
NEK9-201ENST00000238616 SMCO2A6NFE2 343 aa14.44□□□□□ -0.1
NEK9-201ENST00000238616 GARSP41250 739 aaKnown RBP14.44□□□□□ -0.1
NEK9-201ENST00000238616 UHMK1Q8TAS1 419 aaKnown RBP14.44□□□□□ -0.1
NEK9-201ENST00000238616 KIAA0825Q8IV33 1275 aa14.43□□□□□ -0.1
NEK9-201ENST00000238616 C7orf31Q8N865 590 aa14.43□□□□□ -0.1
NEK9-201ENST00000238616 PRPF38AQ8NAV1 312 aaKnown RBP14.43□□□□□ -0.1
NEK9-201ENST00000238616 SYNDIG1Q9H7V2 258 aa14.43□□□□□ -0.1
NEK9-201ENST00000238616 MYO18AQ92614 2054 aaKnown RBP14.43□□□□□ -0.1
NEK9-201ENST00000238616 SPICE1Q8N0Z3 855 aa14.43□□□□□ -0.1
NEK9-201ENST00000238616 PNOCQ13519 176 aa14.43□□□□□ -0.1
NEK9-201ENST00000238616 CSRNP1Q96S65 589 aa14.43□□□□□ -0.1
NEK9-201ENST00000238616 COG4Q9H9E3 785 aa14.43□□□□□ -0.1
NEK9-201ENST00000238616 SLC8A2Q9UPR5 921 aa14.43□□□□□ -0.1
NEK9-201ENST00000238616 NPATQ14207 1427 aa14.43□□□□□ -0.1
NEK9-201ENST00000238616 PI4K2BQ8TCG2 481 aa14.43□□□□□ -0.1
NEK9-201ENST00000238616 EEF2KMTQ96G04 330 aa14.43□□□□□ -0.1
NEK9-201ENST00000238616 AP5M1Q9H0R1 490 aa14.43□□□□□ -0.1
NEK9-201ENST00000238616 SNX25Q9H3E2 840 aa14.43□□□□□ -0.1
NEK9-201ENST00000238616 SLC38A10Q9HBR0 1119 aa14.43□□□□□ -0.1
NEK9-201ENST00000238616 TEKT2Q9UIF3 430 aa14.43□□□□□ -0.1
NEK9-201ENST00000238616 POLR2BP30876 1174 aaKnown RBP14.43□□□□□ -0.1
NEK9-201ENST00000238616 ADKP55263 362 aaKnown RBP14.43□□□□□ -0.1
NEK9-201ENST00000238616 TRMT10CQ7L0Y3 403 aaKnown RBP14.43□□□□□ -0.1
NEK9-201ENST00000238616 TRMT44Q8IYL2 757 aaKnown RBP14.43□□□□□ -0.1
NEK9-201ENST00000238616 PSTPIP2Q9H939 334 aa14.43□□□□□ -0.1
NEK9-201ENST00000238616 USP21Q9UK80 565 aa14.43□□□□□ -0.1
NEK9-201ENST00000238616 TTC19Q6DKK2 380 aaPredicted RBP14.43□□□□□ -0.1
NEK9-201ENST00000238616 FAM178BQ8IXR5 827 aa14.43□□□□□ -0.1
NEK9-201ENST00000238616 CARD6Q9BX69 1037 aa14.43□□□□□ -0.1
NEK9-201ENST00000238616 FRMD3A2A2Y4 597 aa14.43□□□□□ -0.1
NEK9-201ENST00000238616 HSPA2P54652 639 aa14.43□□□□□ -0.1
NEK9-201ENST00000238616 PAK2Q13177 524 aa14.43□□□□□ -0.1
NEK9-201ENST00000238616 KDM3AQ9Y4C1 1321 aa14.42□□□□□ -0.1
NEK9-201ENST00000238616 PDE8AO60658 829 aa14.42□□□□□ -0.1
NEK9-201ENST00000238616 ZNF18P17022 549 aa14.42□□□□□ -0.1
NEK9-201ENST00000238616 MARK3P27448 753 aa14.42□□□□□ -0.1
NEK9-201ENST00000238616 ZNF654Q8IZM8 581 aa14.42□□□□□ -0.1
NEK9-201ENST00000238616 PYGLP06737 847 aa14.42□□□□□ -0.1
NEK9-201ENST00000238616 SOX5P35711 763 aa14.42□□□□□ -0.1
NEK9-201ENST00000238616 TNFAIP1Q13829 316 aa14.42□□□□□ -0.1
NEK9-201ENST00000238616 METTL23Q86XA0 190 aa14.42□□□□□ -0.1
NEK9-201ENST00000238616 IBTKQ9P2D0 1353 aaPredicted RBP14.42□□□□□ -0.1
NEK9-201ENST00000238616 ZSCAN20P17040 1043 aaPredicted RBP14.42□□□□□ -0.1
NEK9-201ENST00000238616 TRAPPC10P48553 1259 aa14.42□□□□□ -0.1
NEK9-201ENST00000238616 SLC12A6Q9UHW9 1150 aa14.42□□□□□ -0.1
NEK9-201ENST00000238616 FANCAO15360 1455 aa14.42□□□□□ -0.1
NEK9-201ENST00000238616 PDE6BP35913 854 aa14.42□□□□□ -0.1
NEK9-201ENST00000238616 FANCCQ00597 558 aa14.42□□□□□ -0.1
NEK9-201ENST00000238616 LLGL1Q15334 1064 aa14.42□□□□□ -0.1
NEK9-201ENST00000238616 CERKLQ49MI3 558 aaPredicted RBP14.42□□□□□ -0.1
NEK9-201ENST00000238616 FAM8A1Q9UBU6 413 aa14.42□□□□□ -0.1
NEK9-201ENST00000238616 ZNF532Q9HCE3 1301 aa14.42□□□□□ -0.1
NEK9-201ENST00000238616 SRGAP2BP0DMP2 458 aa14.42□□□□□ -0.1
NEK9-201ENST00000238616 HS1BP3Q53T59 392 aa14.42□□□□□ -0.1
NEK9-201ENST00000238616 NEUROG2Q9H2A3 272 aa14.42□□□□□ -0.1
NEK9-201ENST00000238616 Q9H521 79 aa14.42□□□□□ -0.1
NEK9-201ENST00000238616 ARAP1Q96P48 1450 aa14.42□□□□□ -0.1
NEK9-201ENST00000238616 INHBAP08476 426 aa14.41□□□□□ -0.1
NEK9-201ENST00000238616 CLTAP09496 248 aa14.41□□□□□ -0.1
NEK9-201ENST00000238616 OTUD7BQ6GQQ9 843 aa14.41□□□□□ -0.1
NEK9-201ENST00000238616 SPATA5Q8NB90 893 aa14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms