RNA–Protein interactions for RNA: ENST00000238146.8

DDX55-201, Transcript of DEAD-box helicase 55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX55, Length 2,654 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-201ENST00000238146 FAM76AQ8TAV0 307 aa17.36■□□□□ 0.37
DDX55-201ENST00000238146 AENQ8WTP8 325 aaKnown RBP17.36■□□□□ 0.37
DDX55-201ENST00000238146 KAT14Q9H8E8 782 aa17.36■□□□□ 0.37
DDX55-201ENST00000238146 JADE2Q9NQC1 790 aa17.36■□□□□ 0.37
DDX55-201ENST00000238146 MACROD2A1Z1Q3 448 aa17.35■□□□□ 0.37
DDX55-201ENST00000238146 TRIM21P19474 475 aaKnown RBP17.35■□□□□ 0.37
DDX55-201ENST00000238146 EIF5P55010 431 aaKnown RBP17.35■□□□□ 0.37
DDX55-201ENST00000238146 CYP27A1Q02318 531 aa17.35■□□□□ 0.37
DDX55-201ENST00000238146 EFCAB13Q8IY85 973 aa17.35■□□□□ 0.37
DDX55-201ENST00000238146 CCDC170Q8IYT3 715 aa17.35■□□□□ 0.37
DDX55-201ENST00000238146 HINFPQ9BQA5 517 aa17.35■□□□□ 0.37
DDX55-201ENST00000238146 TUBGCP2Q9BSJ2 902 aa17.35■□□□□ 0.37
DDX55-201ENST00000238146 EXOC1Q9NV70 894 aa17.35■□□□□ 0.37
DDX55-201ENST00000238146 MAGEC2Q9UBF1 373 aaPredicted RBP17.35■□□□□ 0.37
DDX55-201ENST00000238146 DCCP43146 1447 aa17.35■□□□□ 0.37
DDX55-201ENST00000238146 SLIT2O94813 1529 aa17.35■□□□□ 0.37
DDX55-201ENST00000238146 GOLGA6CA6NDK9 693 aa17.35■□□□□ 0.37
DDX55-201ENST00000238146 GOLGA6BA6NDN3 693 aa17.35■□□□□ 0.37
DDX55-201ENST00000238146 PSMA7O14818 248 aa17.35■□□□□ 0.37
DDX55-201ENST00000238146 IPO7O95373 1038 aaKnown RBP17.35■□□□□ 0.37
DDX55-201ENST00000238146 GOLGA6DP0CG33 693 aa17.35■□□□□ 0.37
DDX55-201ENST00000238146 DYNLL1P63167 89 aaKnown RBP17.35■□□□□ 0.37
DDX55-201ENST00000238146 PFKFB3Q16875 520 aaPredicted RBP17.35■□□□□ 0.37
DDX55-201ENST00000238146 CADPS2Q86UW7 1296 aa17.35■□□□□ 0.37
DDX55-201ENST00000238146 ZNHIT6Q9NWK9 470 aaKnown RBP17.35■□□□□ 0.37
DDX55-201ENST00000238146 GOLGA6AQ9NYA3 693 aa17.35■□□□□ 0.37
DDX55-201ENST00000238146 FAM184BQ9ULE4 1060 aa17.35■□□□□ 0.37
DDX55-201ENST00000238146 JRKLQ9Y4A0 524 aa17.35■□□□□ 0.37
DDX55-201ENST00000238146 NUP98P52948 1817 aa17.35■□□□□ 0.37
DDX55-201ENST00000238146 NMT2O60551 498 aa17.34■□□□□ 0.37
DDX55-201ENST00000238146 ZBED6P86452 979 aa17.34■□□□□ 0.37
DDX55-201ENST00000238146 SUSD4Q5VX71 490 aa17.34■□□□□ 0.37
DDX55-201ENST00000238146 GIMAP8Q8ND71 665 aaPredicted RBP17.34■□□□□ 0.37
DDX55-201ENST00000238146 EEF2KMTQ96G04 330 aa17.34■□□□□ 0.37
DDX55-201ENST00000238146 NUP58Q9BVL2 599 aa17.34■□□□□ 0.37
DDX55-201ENST00000238146 PP2D1A8MPX8 630 aa17.34■□□□□ 0.37
DDX55-201ENST00000238146 RHOBTB3O94955 611 aa17.34■□□□□ 0.37
DDX55-201ENST00000238146 IRAK1P51617 712 aa17.34■□□□□ 0.37
DDX55-201ENST00000238146 PDE4CQ08493 712 aa17.34■□□□□ 0.37
DDX55-201ENST00000238146 TBC1D8BQ0IIM8 1120 aa17.34■□□□□ 0.37
DDX55-201ENST00000238146 CREG2Q8IUH2 290 aa17.34■□□□□ 0.37
DDX55-201ENST00000238146 DUSP9Q99956 384 aaKnown RBP17.34■□□□□ 0.37
DDX55-201ENST00000238146 CPP00450 1065 aa17.34■□□□□ 0.37
DDX55-201ENST00000238146 RETREG2Q8NC44 543 aa17.34■□□□□ 0.37
DDX55-201ENST00000238146 HDAC7Q8WUI4 952 aa17.34■□□□□ 0.37
DDX55-201ENST00000238146 BRIP1Q9BX63 1249 aa17.34■□□□□ 0.37
DDX55-201ENST00000238146 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.33■□□□□ 0.37
DDX55-201ENST00000238146 FAM205AQ6ZU69 1335 aa17.33■□□□□ 0.37
DDX55-201ENST00000238146 ZNF263O14978 683 aa17.33■□□□□ 0.36
DDX55-201ENST00000238146 VAV2P52735 878 aa17.33■□□□□ 0.36
DDX55-201ENST00000238146 EVX2Q03828 476 aa17.33■□□□□ 0.36
DDX55-201ENST00000238146 KIF5AQ12840 1032 aa17.33■□□□□ 0.36
DDX55-201ENST00000238146 EZH2Q15910 746 aaKnown RBP17.33■□□□□ 0.36
DDX55-201ENST00000238146 IQCEQ6IPM2 695 aa17.33■□□□□ 0.36
DDX55-201ENST00000238146 TADA2BQ86TJ2 420 aa17.33■□□□□ 0.36
DDX55-201ENST00000238146 MMGT1Q8N4V1 131 aa17.33■□□□□ 0.36
DDX55-201ENST00000238146 CSGALNACT2Q8N6G5 542 aa17.33■□□□□ 0.36
DDX55-201ENST00000238146 SECISBP2LQ93073 1101 aaKnown RBP17.33■□□□□ 0.36
DDX55-201ENST00000238146 A0A087WUV0 522 aaPredicted RBP17.33■□□□□ 0.36
DDX55-201ENST00000238146 CHRNDQ07001 517 aa17.33■□□□□ 0.36
DDX55-201ENST00000238146 AMOTL1Q8IY63 956 aa17.33■□□□□ 0.36
DDX55-201ENST00000238146 FNBP4Q8N3X1 1017 aaPredicted RBP17.33■□□□□ 0.36
DDX55-201ENST00000238146 NOC3LQ8WTT2 800 aaKnown RBP17.33■□□□□ 0.36
DDX55-201ENST00000238146 KBTBD4Q9NVX7 518 aa17.33■□□□□ 0.36
DDX55-201ENST00000238146 DMGDHQ9UI17 866 aaKnown RBP17.33■□□□□ 0.36
DDX55-201ENST00000238146 SNX12Q9UMY4 172 aa17.33■□□□□ 0.36
DDX55-201ENST00000238146 EXOC5O00471 708 aa17.32■□□□□ 0.36
DDX55-201ENST00000238146 PCP11498 1178 aaKnown RBP17.32■□□□□ 0.36
DDX55-201ENST00000238146 SND1Q7KZF4 910 aaKnown RBP eCLIP17.32■□□□□ 0.36
DDX55-201ENST00000238146 KRT26Q7Z3Y9 468 aa17.32■□□□□ 0.36
DDX55-201ENST00000238146 BLIDQ8IZY5 108 aa17.32■□□□□ 0.36
DDX55-201ENST00000238146 RASSF8Q8NHQ8 419 aa17.32■□□□□ 0.36
DDX55-201ENST00000238146 SMCR8Q8TEV9 937 aaPredicted RBP17.32■□□□□ 0.36
DDX55-201ENST00000238146 PLIN2Q99541 437 aa17.32■□□□□ 0.36
DDX55-201ENST00000238146 EHD4Q9H223 541 aa17.32■□□□□ 0.36
DDX55-201ENST00000238146 LRWD1Q9UFC0 647 aa17.32■□□□□ 0.36
DDX55-201ENST00000238146 NUTM2BA6NNL0 878 aaPredicted RBP17.32■□□□□ 0.36
DDX55-201ENST00000238146 NUTM2EB1AL46 878 aaPredicted RBP17.32■□□□□ 0.36
DDX55-201ENST00000238146 USP17L12C9JPN9 530 aa17.32■□□□□ 0.36
DDX55-201ENST00000238146 USP17L21D6R901 530 aa17.32■□□□□ 0.36
DDX55-201ENST00000238146 IGHMBP2P38935 993 aaKnown RBP17.32■□□□□ 0.36
DDX55-201ENST00000238146 CCT5P48643 541 aa17.32■□□□□ 0.36
DDX55-201ENST00000238146 GTF2A1P52655 376 aaPredicted RBP17.32■□□□□ 0.36
DDX55-201ENST00000238146 CCDC70Q6NSX1 233 aa17.32■□□□□ 0.36
DDX55-201ENST00000238146 DTHD1Q6ZMT9 781 aa17.32■□□□□ 0.36
DDX55-201ENST00000238146 RASGRP4Q8TDF6 673 aa17.32■□□□□ 0.36
DDX55-201ENST00000238146 LRRC15Q8TF66 581 aa17.32■□□□□ 0.36
DDX55-201ENST00000238146 RRP36Q96EU6 259 aaKnown RBP17.32■□□□□ 0.36
DDX55-201ENST00000238146 LRRC1Q9BTT6 524 aa17.32■□□□□ 0.36
DDX55-201ENST00000238146 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.32■□□□□ 0.36
DDX55-201ENST00000238146 BAZ2AQ9UIF9 1905 aaKnown RBP17.32■□□□□ 0.36
DDX55-201ENST00000238146 MYL1P05976 194 aa17.31■□□□□ 0.36
DDX55-201ENST00000238146 CDK17Q00537 523 aa17.31■□□□□ 0.36
DDX55-201ENST00000238146 PPFIA1Q13136 1202 aa17.31■□□□□ 0.36
DDX55-201ENST00000238146 CERS3Q8IU89 383 aa17.31■□□□□ 0.36
DDX55-201ENST00000238146 DHTKD1Q96HY7 919 aaPredicted RBP17.31■□□□□ 0.36
DDX55-201ENST00000238146 TMEM60Q9H2L4 133 aa17.31■□□□□ 0.36
DDX55-201ENST00000238146 CALML3P27482 149 aa17.31■□□□□ 0.36
DDX55-201ENST00000238146 IL6STP40189 918 aaPredicted RBP17.31■□□□□ 0.36
DDX55-201ENST00000238146 EVA1CP58658 441 aa17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms