RNA–Protein interactions for RNA: ENST00000231061.8

SPARC-201, Transcript of secreted protein acidic and cysteine rich, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPARC, Length 3,701 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-201ENST00000231061 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.31□□□□□ -0.92
SPARC-201ENST00000231061 ZNF75CPQ92670 426 aaPredicted RBP9.31□□□□□ -0.92
SPARC-201ENST00000231061 C8orf37Q96NL8 207 aa9.31□□□□□ -0.92
SPARC-201ENST00000231061 EPB41L4AQ9HCS5 686 aaPredicted RBP9.31□□□□□ -0.92
SPARC-201ENST00000231061 TRIM17Q9Y577 477 aa9.31□□□□□ -0.92
SPARC-201ENST00000231061 NDUFB9Q9Y6M9 179 aa9.31□□□□□ -0.92
SPARC-201ENST00000231061 PAHP00439 452 aa9.31□□□□□ -0.92
SPARC-201ENST00000231061 CCDC192P0DO97 292 aa9.31□□□□□ -0.92
SPARC-201ENST00000231061 TRAPPC10P48553 1259 aa9.31□□□□□ -0.92
SPARC-201ENST00000231061 ST3GAL1Q11201 340 aa9.31□□□□□ -0.92
SPARC-201ENST00000231061 BRD3Q15059 726 aa9.31□□□□□ -0.92
SPARC-201ENST00000231061 LTN1O94822 1766 aa9.3□□□□□ -0.92
SPARC-201ENST00000231061 ARPC4-TTLL3A0A0A6YYG9 625 aa9.3□□□□□ -0.92
SPARC-201ENST00000231061 LRRC72A6NJI9 287 aa9.3□□□□□ -0.92
SPARC-201ENST00000231061 TBKBP1A7MCY6 615 aa9.3□□□□□ -0.92
SPARC-201ENST00000231061 PDCP20941 246 aa9.3□□□□□ -0.92
SPARC-201ENST00000231061 ENDOUP21128 410 aaKnown RBP9.3□□□□□ -0.92
SPARC-201ENST00000231061 COL9A3Q14050 684 aaPredicted RBP9.3□□□□□ -0.92
SPARC-201ENST00000231061 COPS6Q7L5N1 327 aa9.3□□□□□ -0.92
SPARC-201ENST00000231061 ARL6IP6Q8N6S5 226 aa9.3□□□□□ -0.92
SPARC-201ENST00000231061 MAP4K1Q92918 833 aa9.3□□□□□ -0.92
SPARC-201ENST00000231061 KAZALD1Q96I82 304 aa9.3□□□□□ -0.92
SPARC-201ENST00000231061 PAWRQ96IZ0 340 aaKnown RBP9.3□□□□□ -0.92
SPARC-201ENST00000231061 GPR101Q96P66 508 aaPredicted RBP9.3□□□□□ -0.92
SPARC-201ENST00000231061 ZCWPW1Q9H0M4 648 aa9.3□□□□□ -0.92
SPARC-201ENST00000231061 NUP62CLQ9H1M0 184 aa9.3□□□□□ -0.92
SPARC-201ENST00000231061 RGL1Q9NZL6 768 aa9.3□□□□□ -0.92
SPARC-201ENST00000231061 ATG7O95352 703 aa9.3□□□□□ -0.92
SPARC-201ENST00000231061 SKIV2L2P42285 1042 aaKnown RBP9.3□□□□□ -0.92
SPARC-201ENST00000231061 ZBTB17Q13105 803 aa9.3□□□□□ -0.92
SPARC-201ENST00000231061 ANKRD1Q15327 319 aa9.3□□□□□ -0.92
SPARC-201ENST00000231061 MUM1Q2TAK8 710 aa9.3□□□□□ -0.92
SPARC-201ENST00000231061 APPBP2Q92624 585 aa9.3□□□□□ -0.92
SPARC-201ENST00000231061 TAF6LQ9Y6J9 622 aa9.3□□□□□ -0.92
SPARC-201ENST00000231061 IGKV5-2P06315 115 aa9.3□□□□□ -0.92
SPARC-201ENST00000231061 GYS1P13807 737 aa9.3□□□□□ -0.92
SPARC-201ENST00000231061 SLC16A2P36021 539 aa9.3□□□□□ -0.92
SPARC-201ENST00000231061 PDE4DQ08499 809 aa9.3□□□□□ -0.92
SPARC-201ENST00000231061 ZRSR1Q15695 479 aaKnown RBP9.3□□□□□ -0.92
SPARC-201ENST00000231061 ARHGAP22Q7Z5H3 698 aa9.3□□□□□ -0.92
SPARC-201ENST00000231061 TTC6Q86TZ1 520 aa9.3□□□□□ -0.92
SPARC-201ENST00000231061 ZNF589Q86UQ0 364 aaPredicted RBP9.3□□□□□ -0.92
SPARC-201ENST00000231061 OSTM1Q86WC4 334 aa9.3□□□□□ -0.92
SPARC-201ENST00000231061 LRRC43Q8N309 656 aa9.3□□□□□ -0.92
SPARC-201ENST00000231061 EXOC4Q96A65 974 aa9.3□□□□□ -0.92
SPARC-201ENST00000231061 RNPC3Q96LT9 517 aaKnown RBP9.3□□□□□ -0.92
SPARC-201ENST00000231061 NEK1Q96PY6 1258 aa9.3□□□□□ -0.92
SPARC-201ENST00000231061 AXIN2Q9Y2T1 843 aa9.3□□□□□ -0.92
SPARC-201ENST00000231061 TCHHQ07283 1943 aa9.29□□□□□ -0.92
SPARC-201ENST00000231061 A0A1B0GUA9 196 aa9.29□□□□□ -0.92
SPARC-201ENST00000231061 FGAP02671 866 aa9.29□□□□□ -0.92
SPARC-201ENST00000231061 ARPC4P59998 168 aa9.29□□□□□ -0.92
SPARC-201ENST00000231061 NAA25Q14CX7 972 aa9.29□□□□□ -0.92
SPARC-201ENST00000231061 MAP3K11Q16584 847 aa9.29□□□□□ -0.92
SPARC-201ENST00000231061 GTF3C6Q969F1 213 aa9.29□□□□□ -0.92
SPARC-201ENST00000231061 TACO1Q9BSH4 297 aaKnown RBP9.29□□□□□ -0.92
SPARC-201ENST00000231061 SNX5Q9Y5X3 404 aa9.29□□□□□ -0.92
SPARC-201ENST00000231061 NFAT5O94916 1531 aa9.29□□□□□ -0.92
SPARC-201ENST00000231061 H3BQV1 296 aa9.29□□□□□ -0.92
SPARC-201ENST00000231061 RPS6KB1P23443 525 aa9.29□□□□□ -0.92
SPARC-201ENST00000231061 IFFO2Q5TF58 517 aa9.29□□□□□ -0.92
SPARC-201ENST00000231061 TTC5Q8N0Z6 440 aa9.29□□□□□ -0.92
SPARC-201ENST00000231061 HVCN1Q96D96 273 aa9.29□□□□□ -0.92
SPARC-201ENST00000231061 SPDL1Q96EA4 605 aa9.29□□□□□ -0.92
SPARC-201ENST00000231061 ZMAT2Q96NC0 199 aaKnown RBP9.29□□□□□ -0.92
SPARC-201ENST00000231061 PFDN2Q9UHV9 154 aa9.29□□□□□ -0.92
SPARC-201ENST00000231061 USTQ9Y2C2 406 aa9.29□□□□□ -0.92
SPARC-201ENST00000231061 MARF1Q9Y4F3 1742 aaKnown RBP9.29□□□□□ -0.92
SPARC-201ENST00000231061 NEURL1BA8MQ27 555 aa9.29□□□□□ -0.92
SPARC-201ENST00000231061 KRT10P13645 584 aa9.29□□□□□ -0.92
SPARC-201ENST00000231061 EPHA10Q5JZY3 1008 aa9.29□□□□□ -0.92
SPARC-201ENST00000231061 ZNF790Q6PG37 636 aa9.29□□□□□ -0.92
SPARC-201ENST00000231061 CCDC129Q6ZRS4 1044 aa9.29□□□□□ -0.92
SPARC-201ENST00000231061 UBE3BQ7Z3V4 1068 aa9.29□□□□□ -0.92
SPARC-201ENST00000231061 MILR1Q7Z6M3 343 aa9.29□□□□□ -0.92
SPARC-201ENST00000231061 SIX5Q8N196 739 aa9.29□□□□□ -0.92
SPARC-201ENST00000231061 DDX11Q96FC9 970 aa9.29□□□□□ -0.92
SPARC-201ENST00000231061 MAELQ96JY0 434 aaKnown RBP9.29□□□□□ -0.92
SPARC-201ENST00000231061 DNAJC25Q9H1X3 360 aa9.29□□□□□ -0.92
SPARC-201ENST00000231061 MED1Q15648 1581 aaPredicted RBP9.29□□□□□ -0.92
SPARC-201ENST00000231061 N4BP2Q86UW6 1770 aaPredicted RBP9.28□□□□□ -0.92
SPARC-201ENST00000231061 ATP5J2-PTCD1G3V325 749 aa9.28□□□□□ -0.92
SPARC-201ENST00000231061 PTCD1O75127 700 aaKnown RBP9.28□□□□□ -0.92
SPARC-201ENST00000231061 RPN1P04843 607 aaKnown RBP9.28□□□□□ -0.92
SPARC-201ENST00000231061 FAM47EQ6ZV65 393 aa9.28□□□□□ -0.92
SPARC-201ENST00000231061 KRT28Q7Z3Y7 464 aa9.28□□□□□ -0.92
SPARC-201ENST00000231061 LINC00469Q8N7U9 141 aa9.28□□□□□ -0.92
SPARC-201ENST00000231061 SPAG5Q96R06 1193 aa9.28□□□□□ -0.92
SPARC-201ENST00000231061 NCAPD2Q15021 1401 aa9.28□□□□□ -0.92
SPARC-201ENST00000231061 ADGRL3Q9HAR2 1447 aa9.28□□□□□ -0.92
SPARC-201ENST00000231061 HSPA8P11142 646 aaKnown RBP9.28□□□□□ -0.92
SPARC-201ENST00000231061 PRLRP16471 622 aa9.28□□□□□ -0.92
SPARC-201ENST00000231061 DESP17661 470 aa9.28□□□□□ -0.92
SPARC-201ENST00000231061 TATP17735 454 aaPredicted RBP9.28□□□□□ -0.92
SPARC-201ENST00000231061 ATP2B2Q01814 1243 aa9.28□□□□□ -0.92
SPARC-201ENST00000231061 TFCP2Q12800 502 aa9.28□□□□□ -0.92
SPARC-201ENST00000231061 GCKRQ14397 625 aa9.28□□□□□ -0.92
SPARC-201ENST00000231061 KRI1Q8N9T8 703 aaKnown RBP9.28□□□□□ -0.92
SPARC-201ENST00000231061 ZNF496Q96IT1 587 aaPredicted RBP9.28□□□□□ -0.92
SPARC-201ENST00000231061 FERD3LQ96RJ6 166 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms