RNA–Protein interactions for RNA: ENST00000228918.8

LTBR-201, Transcript of lymphotoxin beta receptor, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LTBR, Length 2,260 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-201ENST00000228918 SH3RF3Q8TEJ3 882 aaPredicted RBP18.3■□□□□ 0.52
LTBR-201ENST00000228918 THAP9Q9H5L6 903 aa18.3■□□□□ 0.52
LTBR-201ENST00000228918 TCP11L1Q9NUJ3 509 aa18.3■□□□□ 0.52
LTBR-201ENST00000228918 KBTBD4Q9NVX7 518 aa18.3■□□□□ 0.52
LTBR-201ENST00000228918 BARHL2Q9NY43 387 aa18.3■□□□□ 0.52
LTBR-201ENST00000228918 RAB21Q9UL25 225 aa18.3■□□□□ 0.52
LTBR-201ENST00000228918 A0A1W2PQC6 194 aa18.29■□□□□ 0.52
LTBR-201ENST00000228918 LAD1O00515 517 aa18.29■□□□□ 0.52
LTBR-201ENST00000228918 POLR3GO15318 223 aaPredicted RBP18.29■□□□□ 0.52
LTBR-201ENST00000228918 RHOBTB3O94955 611 aa18.29■□□□□ 0.52
LTBR-201ENST00000228918 TM4SF1P30408 202 aa18.29■□□□□ 0.52
LTBR-201ENST00000228918 UBA7P41226 1012 aa18.29■□□□□ 0.52
LTBR-201ENST00000228918 TUBB4BP68371 445 aa18.29■□□□□ 0.52
LTBR-201ENST00000228918 HEATR3Q7Z4Q2 680 aa18.29■□□□□ 0.52
LTBR-201ENST00000228918 CCDC24Q8N4L8 307 aa18.29■□□□□ 0.52
LTBR-201ENST00000228918 HNRNPLLQ8WVV9 542 aaKnown RBP18.29■□□□□ 0.52
LTBR-201ENST00000228918 CHP1Q99653 195 aa18.29■□□□□ 0.52
LTBR-201ENST00000228918 MKNK2Q9HBH9 465 aa18.29■□□□□ 0.52
LTBR-201ENST00000228918 ZKSCAN7Q9P0L1 754 aaPredicted RBP18.29■□□□□ 0.52
LTBR-201ENST00000228918 TTC26A0AVF1 554 aa18.29■□□□□ 0.52
LTBR-201ENST00000228918 LDHBP07195 334 aaKnown RBP18.29■□□□□ 0.52
LTBR-201ENST00000228918 PRPHP41219 470 aa18.29■□□□□ 0.52
LTBR-201ENST00000228918 SEMA3FQ13275 785 aa18.29■□□□□ 0.52
LTBR-201ENST00000228918 WHAMMP3Q1A5X7 153 aa18.29■□□□□ 0.52
LTBR-201ENST00000228918 GIMAP8Q8ND71 665 aaPredicted RBP18.29■□□□□ 0.52
LTBR-201ENST00000228918 ZNF507Q8TCN5 953 aa18.29■□□□□ 0.52
LTBR-201ENST00000228918 LRRC15Q8TF66 581 aa18.29■□□□□ 0.52
LTBR-201ENST00000228918 REXO2Q9Y3B8 237 aaKnown RBP18.29■□□□□ 0.52
LTBR-201ENST00000228918 ERICH4A6NGS2 130 aa18.28■□□□□ 0.52
LTBR-201ENST00000228918 MAP2K7O14733 419 aa18.28■□□□□ 0.52
LTBR-201ENST00000228918 NDUFA10O95299 355 aa18.28■□□□□ 0.52
LTBR-201ENST00000228918 TSPY3P0CV98 308 aa18.28■□□□□ 0.52
LTBR-201ENST00000228918 TSPY8P0CW00 308 aa18.28■□□□□ 0.52
LTBR-201ENST00000228918 SLC20A2Q08357 652 aa18.28■□□□□ 0.52
LTBR-201ENST00000228918 STIM1Q13586 685 aa18.28■□□□□ 0.52
LTBR-201ENST00000228918 PNKPQ96T60 521 aa18.28■□□□□ 0.52
LTBR-201ENST00000228918 DNAJC7Q99615 494 aa18.28■□□□□ 0.52
LTBR-201ENST00000228918 EPN1Q9Y6I3 576 aaPredicted RBP18.28■□□□□ 0.52
LTBR-201ENST00000228918 CDK5RAP2Q96SN8 1893 aa18.28■□□□□ 0.52
LTBR-201ENST00000228918 FLT1P17948 1338 aa18.28■□□□□ 0.52
LTBR-201ENST00000228918 PALM3A6NDB9 673 aaPredicted RBP18.28■□□□□ 0.52
LTBR-201ENST00000228918 PSMA7O14818 248 aa18.28■□□□□ 0.52
LTBR-201ENST00000228918 TFRCP02786 760 aaKnown RBP18.28■□□□□ 0.52
LTBR-201ENST00000228918 AMPD2Q01433 879 aa18.28■□□□□ 0.52
LTBR-201ENST00000228918 TPTE2Q6XPS3 522 aa18.28■□□□□ 0.52
LTBR-201ENST00000228918 OR8K1Q8NGG5 319 aa18.28■□□□□ 0.52
LTBR-201ENST00000228918 WDR66Q8TBY9 1149 aa18.28■□□□□ 0.52
LTBR-201ENST00000228918 TRIM47Q96LD4 638 aa18.28■□□□□ 0.52
LTBR-201ENST00000228918 RPS6KA4O75676 772 aa18.27■□□□□ 0.52
LTBR-201ENST00000228918 TTI2Q6NXR4 508 aa18.27■□□□□ 0.52
LTBR-201ENST00000228918 AMOTL1Q8IY63 956 aa18.27■□□□□ 0.52
LTBR-201ENST00000228918 SLC44A5Q8NCS7 719 aa18.27■□□□□ 0.52
LTBR-201ENST00000228918 TMEM47Q9BQJ4 181 aa18.27■□□□□ 0.52
LTBR-201ENST00000228918 DIXDC1Q155Q3 683 aa18.26■□□□□ 0.51
LTBR-201ENST00000228918 BEND6Q5SZJ8 279 aaPredicted RBP18.26■□□□□ 0.51
LTBR-201ENST00000228918 RC3H1Q5TC82 1133 aaKnown RBP18.26■□□□□ 0.51
LTBR-201ENST00000228918 PLIN2Q99541 437 aa18.26■□□□□ 0.51
LTBR-201ENST00000228918 CUEDC2Q9H467 287 aa18.26■□□□□ 0.51
LTBR-201ENST00000228918 MAGEF1Q9HAY2 307 aa18.26■□□□□ 0.51
LTBR-201ENST00000228918 CAPN11Q9UMQ6 739 aa18.26■□□□□ 0.51
LTBR-201ENST00000228918 LUC7L2Q9Y383 392 aaKnown RBP18.26■□□□□ 0.51
LTBR-201ENST00000228918 CTAGE15A4D2H0 777 aa18.26■□□□□ 0.51
LTBR-201ENST00000228918 CTAGE8P0CG41 777 aa18.26■□□□□ 0.51
LTBR-201ENST00000228918 PPP4CP60510 307 aa18.26■□□□□ 0.51
LTBR-201ENST00000228918 PIP4K2BP78356 416 aa18.26■□□□□ 0.51
LTBR-201ENST00000228918 CTAGE6Q86UF2 777 aa18.26■□□□□ 0.51
LTBR-201ENST00000228918 CTAGE4Q8IX94 777 aa18.26■□□□□ 0.51
LTBR-201ENST00000228918 ZNF444Q8N0Y2 327 aaPredicted RBP18.26■□□□□ 0.51
LTBR-201ENST00000228918 NOC3LQ8WTT2 800 aaKnown RBP18.26■□□□□ 0.51
LTBR-201ENST00000228918 CALCOCO1Q9P1Z2 691 aa18.26■□□□□ 0.51
LTBR-201ENST00000228918 STX8Q9UNK0 236 aa18.26■□□□□ 0.51
LTBR-201ENST00000228918 SNED1Q8TER0 1413 aa18.26■□□□□ 0.51
LTBR-201ENST00000228918 DDX60LQ5H9U9 1706 aaKnown RBP18.26■□□□□ 0.51
LTBR-201ENST00000228918 TULP2O00295 520 aa18.25■□□□□ 0.51
LTBR-201ENST00000228918 ZPR1O75312 459 aa18.25■□□□□ 0.51
LTBR-201ENST00000228918 BAG3O95817 575 aa18.25■□□□□ 0.51
LTBR-201ENST00000228918 RASA1P20936 1047 aa18.25■□□□□ 0.51
LTBR-201ENST00000228918 GSTO1P78417 241 aa18.25■□□□□ 0.51
LTBR-201ENST00000228918 GRIK5Q16478 980 aa18.25■□□□□ 0.51
LTBR-201ENST00000228918 WDR59Q6PJI9 974 aa18.25■□□□□ 0.51
LTBR-201ENST00000228918 AK8Q96MA6 479 aa18.25■□□□□ 0.51
LTBR-201ENST00000228918 LZTS2Q9BRK4 669 aa18.25■□□□□ 0.51
LTBR-201ENST00000228918 ZMYND12Q9H0C1 365 aa18.25■□□□□ 0.51
LTBR-201ENST00000228918 ZCCHC17Q9NP64 241 aaKnown RBP18.25■□□□□ 0.51
LTBR-201ENST00000228918 MAGEC2Q9UBF1 373 aaPredicted RBP18.25■□□□□ 0.51
LTBR-201ENST00000228918 PLCG1P19174 1290 aa18.25■□□□□ 0.51
LTBR-201ENST00000228918 DNM2P50570 870 aa18.25■□□□□ 0.51
LTBR-201ENST00000228918 SLC51AQ86UW1 340 aa18.25■□□□□ 0.51
LTBR-201ENST00000228918 TGFBRAP1Q8WUH2 860 aa18.25■□□□□ 0.51
LTBR-201ENST00000228918 DHTKD1Q96HY7 919 aaPredicted RBP18.25■□□□□ 0.51
LTBR-201ENST00000228918 DUSP9Q99956 384 aaKnown RBP18.25■□□□□ 0.51
LTBR-201ENST00000228918 SPZ1Q9BXG8 430 aa18.25■□□□□ 0.51
LTBR-201ENST00000228918 TRIM10Q9UDY6 481 aa18.25■□□□□ 0.51
LTBR-201ENST00000228918 MYO6Q9UM54 1294 aa18.25■□□□□ 0.51
LTBR-201ENST00000228918 MTMR7Q9Y216 660 aa18.25■□□□□ 0.51
LTBR-201ENST00000228918 OR52Z1P0C646 297 aa18.24■□□□□ 0.51
LTBR-201ENST00000228918 SRGNP10124 158 aa18.24■□□□□ 0.51
LTBR-201ENST00000228918 CABP7Q86V35 215 aa18.24■□□□□ 0.51
LTBR-201ENST00000228918 TTYH3Q9C0H2 523 aa18.24■□□□□ 0.51
LTBR-201ENST00000228918 HAUS4Q9H6D7 363 aa18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms