RNA–Protein interactions for RNA: ENST00000227507.2

CCND1-201, Transcript of cyclin D1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCND1, Length 4,307 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCND1-201ENST00000227507 SH2D4AQ9H788 454 aa12.85□□□□□ -0.35
CCND1-201ENST00000227507 INCENPQ9NQS7 918 aa12.85□□□□□ -0.35
CCND1-201ENST00000227507 ANGEL1Q9UNK9 670 aaKnown RBP12.85□□□□□ -0.35
CCND1-201ENST00000227507 PRDM1O75626 825 aa12.85□□□□□ -0.35
CCND1-201ENST00000227507 PRR5LQ6MZQ0 368 aa12.85□□□□□ -0.35
CCND1-201ENST00000227507 INTS5Q6P9B9 1019 aaKnown RBP12.85□□□□□ -0.35
CCND1-201ENST00000227507 EHMT1Q9H9B1 1298 aa12.85□□□□□ -0.35
CCND1-201ENST00000227507 TUBE1Q9UJT0 475 aa12.85□□□□□ -0.35
CCND1-201ENST00000227507 SAR1BQ9Y6B6 198 aa12.85□□□□□ -0.35
CCND1-201ENST00000227507 NALCNQ8IZF0 1738 aa12.84□□□□□ -0.35
CCND1-201ENST00000227507 IDEP14735 1019 aa12.84□□□□□ -0.35
CCND1-201ENST00000227507 ZMYM1Q5SVZ6 1142 aa12.84□□□□□ -0.35
CCND1-201ENST00000227507 USP49Q70CQ1 688 aa12.84□□□□□ -0.35
CCND1-201ENST00000227507 DONSONQ9NYP3 566 aa12.84□□□□□ -0.35
CCND1-201ENST00000227507 NR5A1Q13285 461 aa12.84□□□□□ -0.35
CCND1-201ENST00000227507 TMTC1Q8IUR5 882 aa12.84□□□□□ -0.35
CCND1-201ENST00000227507 TMEM87BQ96K49 555 aa12.84□□□□□ -0.35
CCND1-201ENST00000227507 CTAGE1Q96RT6 745 aa12.84□□□□□ -0.35
CCND1-201ENST00000227507 COA1Q9GZY4 146 aa12.84□□□□□ -0.35
CCND1-201ENST00000227507 MAGEC2Q9UBF1 373 aaPredicted RBP12.84□□□□□ -0.35
CCND1-201ENST00000227507 ECM2O94769 699 aaPredicted RBP12.84□□□□□ -0.35
CCND1-201ENST00000227507 ODF2Q5BJF6 829 aa12.84□□□□□ -0.35
CCND1-201ENST00000227507 IFT81Q8WYA0 676 aa12.84□□□□□ -0.35
CCND1-201ENST00000227507 PLA2G12BQ9BX93 195 aa12.84□□□□□ -0.35
CCND1-201ENST00000227507 TRIM21P19474 475 aaKnown RBP12.84□□□□□ -0.35
CCND1-201ENST00000227507 FXR1P51114 621 aaKnown RBP eCLIP12.84□□□□□ -0.35
CCND1-201ENST00000227507 MAP2K1Q02750 393 aaPredicted RBP12.84□□□□□ -0.35
CCND1-201ENST00000227507 CYP26C1Q6V0L0 522 aa12.84□□□□□ -0.35
CCND1-201ENST00000227507 ENOX1Q8TC92 643 aaKnown RBP12.84□□□□□ -0.35
CCND1-201ENST00000227507 PIK3R5Q8WYR1 880 aa12.84□□□□□ -0.35
CCND1-201ENST00000227507 HSD3B7Q9H2F3 369 aa12.84□□□□□ -0.35
CCND1-201ENST00000227507 TAOK3Q9H2K8 898 aa12.84□□□□□ -0.35
CCND1-201ENST00000227507 ARPP21Q9UBL0 812 aaPredicted RBP12.84□□□□□ -0.35
CCND1-201ENST00000227507 FRMD3A2A2Y4 597 aa12.83□□□□□ -0.36
CCND1-201ENST00000227507 RNASE9P60153 205 aaKnown RBP12.83□□□□□ -0.36
CCND1-201ENST00000227507 FOXO4P98177 505 aa12.83□□□□□ -0.36
CCND1-201ENST00000227507 ENOX2Q16206 610 aaKnown RBP12.83□□□□□ -0.36
CCND1-201ENST00000227507 RABL6Q3YEC7 729 aaPredicted RBP12.83□□□□□ -0.36
CCND1-201ENST00000227507 MON2Q7Z3U7 1717 aa12.83□□□□□ -0.36
CCND1-201ENST00000227507 USP17L12C9JPN9 530 aa12.83□□□□□ -0.36
CCND1-201ENST00000227507 USP17L21D6R901 530 aa12.83□□□□□ -0.36
CCND1-201ENST00000227507 ERCC3P19447 782 aa12.83□□□□□ -0.36
CCND1-201ENST00000227507 BTDP43251 543 aa12.83□□□□□ -0.36
CCND1-201ENST00000227507 SLC7A5Q01650 507 aa12.83□□□□□ -0.36
CCND1-201ENST00000227507 SF3B3Q15393 1217 aaKnown RBP12.83□□□□□ -0.36
CCND1-201ENST00000227507 TMEM139Q8IV31 216 aa12.83□□□□□ -0.36
CCND1-201ENST00000227507 SCLT1Q96NL6 688 aa12.83□□□□□ -0.36
CCND1-201ENST00000227507 LUC7L2Q9Y383 392 aaKnown RBP12.83□□□□□ -0.36
CCND1-201ENST00000227507 TUBBP07437 444 aa12.83□□□□□ -0.36
CCND1-201ENST00000227507 BMP6P22004 513 aa12.83□□□□□ -0.36
CCND1-201ENST00000227507 RESP18Q5W5W9 173 aa12.83□□□□□ -0.36
CCND1-201ENST00000227507 PLIN2Q99541 437 aa12.83□□□□□ -0.36
CCND1-201ENST00000227507 PICK1Q9NRD5 415 aa12.83□□□□□ -0.36
CCND1-201ENST00000227507 DLG5Q8TDM6 1919 aa12.82□□□□□ -0.36
CCND1-201ENST00000227507 HPDP32754 393 aaPredicted RBP12.82□□□□□ -0.36
CCND1-201ENST00000227507 KANK3Q6NY19 840 aa12.82□□□□□ -0.36
CCND1-201ENST00000227507 EPN1Q9Y6I3 576 aaPredicted RBP12.82□□□□□ -0.36
CCND1-201ENST00000227507 HSF2BPO75031 334 aa12.82□□□□□ -0.36
CCND1-201ENST00000227507 MFAP3LO75121 409 aa12.82□□□□□ -0.36
CCND1-201ENST00000227507 PLCD1P51178 756 aa12.82□□□□□ -0.36
CCND1-201ENST00000227507 C2orf54Q08AI8 447 aa12.82□□□□□ -0.36
CCND1-201ENST00000227507 PDCLQ13371 301 aa12.82□□□□□ -0.36
CCND1-201ENST00000227507 ZNF174Q15697 407 aa12.82□□□□□ -0.36
CCND1-201ENST00000227507 JAKMIP2Q96AA8 810 aa12.82□□□□□ -0.36
CCND1-201ENST00000227507 CALR3Q96L12 384 aaKnown RBP12.82□□□□□ -0.36
CCND1-201ENST00000227507 PUS7LQ9H0K6 701 aaKnown RBP12.82□□□□□ -0.36
CCND1-201ENST00000227507 PCDHB6Q9Y5E3 794 aa12.82□□□□□ -0.36
CCND1-201ENST00000227507 NWD1Q149M9 1564 aa12.82□□□□□ -0.36
CCND1-201ENST00000227507 PPP6R2O75170 966 aa12.82□□□□□ -0.36
CCND1-201ENST00000227507 CALRP27797 417 aaKnown RBP12.82□□□□□ -0.36
CCND1-201ENST00000227507 SSR1P43307 286 aaKnown RBP12.82□□□□□ -0.36
CCND1-201ENST00000227507 MAATS1Q7Z4T9 603 aa12.82□□□□□ -0.36
CCND1-201ENST00000227507 NOSTRINQ8IVI9 506 aa12.82□□□□□ -0.36
CCND1-201ENST00000227507 ZNF513Q8N8E2 541 aaPredicted RBP12.82□□□□□ -0.36
CCND1-201ENST00000227507 EPSTI1Q96J88 318 aa12.82□□□□□ -0.36
CCND1-201ENST00000227507 PANX2Q96RD6 677 aa12.82□□□□□ -0.36
CCND1-201ENST00000227507 MMS19Q96T76 1030 aa12.82□□□□□ -0.36
CCND1-201ENST00000227507 CHP1Q99653 195 aa12.82□□□□□ -0.36
CCND1-201ENST00000227507 RAB34Q9BZG1 259 aa12.82□□□□□ -0.36
CCND1-201ENST00000227507 CSRNP2Q9H175 543 aa12.82□□□□□ -0.36
CCND1-201ENST00000227507 ZNF408Q9H9D4 720 aa12.82□□□□□ -0.36
CCND1-201ENST00000227507 BMP2KQ9NSY1 1161 aaPredicted RBP12.82□□□□□ -0.36
CCND1-201ENST00000227507 SLIT3O75094 1523 aa12.82□□□□□ -0.36
CCND1-201ENST00000227507 RAD17O75943 681 aa12.81□□□□□ -0.36
CCND1-201ENST00000227507 NTSR2O95665 410 aa12.81□□□□□ -0.36
CCND1-201ENST00000227507 TUBB4BP68371 445 aa12.81□□□□□ -0.36
CCND1-201ENST00000227507 GRM1Q13255 1194 aa12.81□□□□□ -0.36
CCND1-201ENST00000227507 BIRC2Q13490 618 aa12.81□□□□□ -0.36
CCND1-201ENST00000227507 SPA17Q15506 151 aa12.81□□□□□ -0.36
CCND1-201ENST00000227507 SPATA1Q5VX52 437 aa12.81□□□□□ -0.36
CCND1-201ENST00000227507 NAA15Q9BXJ9 866 aaKnown RBP12.81□□□□□ -0.36
CCND1-201ENST00000227507 ARHGEF10LQ9HCE6 1279 aa12.81□□□□□ -0.36
CCND1-201ENST00000227507 SNAP23O00161 211 aa12.81□□□□□ -0.36
CCND1-201ENST00000227507 KRT86O43790 486 aa12.81□□□□□ -0.36
CCND1-201ENST00000227507 CXCR5P32302 372 aa12.81□□□□□ -0.36
CCND1-201ENST00000227507 RASGRF1Q13972 1273 aa12.81□□□□□ -0.36
CCND1-201ENST00000227507 EAPPQ56P03 285 aaPredicted RBP12.81□□□□□ -0.36
CCND1-201ENST00000227507 AKNAD1Q5T1N1 836 aa12.81□□□□□ -0.36
CCND1-201ENST00000227507 IFNL3Q8IZI9 196 aa12.81□□□□□ -0.36
CCND1-201ENST00000227507 HNRNPLLQ8WVV9 542 aaKnown RBP12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 77.8 ms