RNA–Protein interactions for RNA: ENST00000224807.9

SFXN3-201, Transcript of sideroflexin 3, humanhuman

TSL 5 BASIC

Gene SFXN3, Length 3,089 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN3-201ENST00000224807 GIMAP7Q8NHV1 300 aa16■□□□□ 0.15
SFXN3-201ENST00000224807 IFIH1Q9BYX4 1025 aaKnown RBP16■□□□□ 0.15
SFXN3-201ENST00000224807 CPVLQ9H3G5 476 aa16■□□□□ 0.15
SFXN3-201ENST00000224807 GOLPH3Q9H4A6 298 aa16■□□□□ 0.15
SFXN3-201ENST00000224807 TJP1Q07157 1748 aa16■□□□□ 0.15
SFXN3-201ENST00000224807 WDR19Q8NEZ3 1342 aa16■□□□□ 0.15
SFXN3-201ENST00000224807 CCDC196A0A1B0GTZ2 297 aa16■□□□□ 0.15
SFXN3-201ENST00000224807 CIAO1O76071 339 aa16■□□□□ 0.15
SFXN3-201ENST00000224807 RPSAP08865 295 aaKnown RBP16■□□□□ 0.15
SFXN3-201ENST00000224807 FAM153BP0C7A2 387 aa16■□□□□ 0.15
SFXN3-201ENST00000224807 PPFIA1Q13136 1202 aa16■□□□□ 0.15
SFXN3-201ENST00000224807 FAM153CQ494X1 144 aa16■□□□□ 0.15
SFXN3-201ENST00000224807 KIF6Q6ZMV9 814 aa16■□□□□ 0.15
SFXN3-201ENST00000224807 CCDC155Q8N6L0 562 aa16■□□□□ 0.15
SFXN3-201ENST00000224807 TUBGCP2Q9BSJ2 902 aa16■□□□□ 0.15
SFXN3-201ENST00000224807 FAM153AQ9UHL3 310 aa16■□□□□ 0.15
SFXN3-201ENST00000224807 MYH8P13535 1937 aa16■□□□□ 0.15
SFXN3-201ENST00000224807 FTCDO95954 541 aa16■□□□□ 0.15
SFXN3-201ENST00000224807 SPATA5Q8NB90 893 aa16■□□□□ 0.15
SFXN3-201ENST00000224807 NOC4LQ9BVI4 516 aaKnown RBP16■□□□□ 0.15
SFXN3-201ENST00000224807 EPB41L5Q9HCM4 733 aa16■□□□□ 0.15
SFXN3-201ENST00000224807 IRS4O14654 1257 aaPredicted RBP15.99■□□□□ 0.15
SFXN3-201ENST00000224807 UBA7P41226 1012 aa15.99■□□□□ 0.15
SFXN3-201ENST00000224807 CARSP49589 748 aaKnown RBP15.99■□□□□ 0.15
SFXN3-201ENST00000224807 KRT83P78385 493 aa15.99■□□□□ 0.15
SFXN3-201ENST00000224807 RASSF7Q02833 373 aa15.99■□□□□ 0.15
SFXN3-201ENST00000224807 KRT23Q9C075 422 aa15.99■□□□□ 0.15
SFXN3-201ENST00000224807 EIF4E1BA6NMX2 242 aaKnown RBP15.99■□□□□ 0.15
SFXN3-201ENST00000224807 EIF3HO15372 352 aaKnown RBP eCLIP15.99■□□□□ 0.15
SFXN3-201ENST00000224807 TTMPQ5BVD1 217 aa15.99■□□□□ 0.15
SFXN3-201ENST00000224807 CFAP58Q5T655 872 aa15.99■□□□□ 0.15
SFXN3-201ENST00000224807 CCDC51Q96ER9 411 aa15.99■□□□□ 0.15
SFXN3-201ENST00000224807 RNPC3Q96LT9 517 aaKnown RBP15.99■□□□□ 0.15
SFXN3-201ENST00000224807 ZIM3Q96PE6 472 aa15.99■□□□□ 0.15
SFXN3-201ENST00000224807 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP15.99■□□□□ 0.15
SFXN3-201ENST00000224807 AATFQ9NY61 560 aaKnown RBP eCLIP15.99■□□□□ 0.15
SFXN3-201ENST00000224807 FAM184BQ9ULE4 1060 aa15.99■□□□□ 0.15
SFXN3-201ENST00000224807 GLI3P10071 1580 aa15.99■□□□□ 0.15
SFXN3-201ENST00000224807 ECM29Q5VYK3 1845 aa15.99■□□□□ 0.15
SFXN3-201ENST00000224807 KIF1AQ12756 1690 aa15.99■□□□□ 0.15
SFXN3-201ENST00000224807 SMIM23A6NLE4 172 aa15.98■□□□□ 0.15
SFXN3-201ENST00000224807 DYNLL1P63167 89 aaKnown RBP15.98■□□□□ 0.15
SFXN3-201ENST00000224807 RRAGAQ7L523 313 aa15.98■□□□□ 0.15
SFXN3-201ENST00000224807 FCER1AP12319 257 aa15.98■□□□□ 0.15
SFXN3-201ENST00000224807 PAFAH1B1P43034 410 aa15.98■□□□□ 0.15
SFXN3-201ENST00000224807 ASIC1P78348 528 aa15.98■□□□□ 0.15
SFXN3-201ENST00000224807 CATIPQ7Z7H3 387 aa15.98■□□□□ 0.15
SFXN3-201ENST00000224807 SGMS1Q86VZ5 419 aa15.98■□□□□ 0.15
SFXN3-201ENST00000224807 SPATA4Q8NEY3 305 aa15.98■□□□□ 0.15
SFXN3-201ENST00000224807 RBM12Q9NTZ6 932 aaKnown RBP15.98■□□□□ 0.15
SFXN3-201ENST00000224807 GOLGB1Q14789 3259 aaKnown RBP15.98■□□□□ 0.15
SFXN3-201ENST00000224807 SCP2P22307 547 aa15.98■□□□□ 0.15
SFXN3-201ENST00000224807 SPAG1Q07617 926 aa15.98■□□□□ 0.15
SFXN3-201ENST00000224807 DYMQ7RTS9 669 aa15.98■□□□□ 0.15
SFXN3-201ENST00000224807 SLC39A2Q9NP94 309 aa15.98■□□□□ 0.15
SFXN3-201ENST00000224807 GEMIN8Q9NWZ8 242 aaKnown RBP15.98■□□□□ 0.15
SFXN3-201ENST00000224807 TACC1O75410 805 aa15.97■□□□□ 0.15
SFXN3-201ENST00000224807 MCM3P25205 808 aa15.97■□□□□ 0.15
SFXN3-201ENST00000224807 LIFRP42702 1097 aa15.97■□□□□ 0.15
SFXN3-201ENST00000224807 HDLBPQ00341 1268 aaKnown RBP15.97■□□□□ 0.15
SFXN3-201ENST00000224807 CEP85LQ5SZL2 805 aa15.97■□□□□ 0.15
SFXN3-201ENST00000224807 IRF2BP1Q8IU81 584 aa15.97■□□□□ 0.15
SFXN3-201ENST00000224807 BANK1Q8NDB2 785 aa15.97■□□□□ 0.15
SFXN3-201ENST00000224807 TRIM31Q9BZY9 425 aa15.97■□□□□ 0.15
SFXN3-201ENST00000224807 PDE4DQ08499 809 aa15.97■□□□□ 0.15
SFXN3-201ENST00000224807 CCDC114Q96M63 670 aa15.97■□□□□ 0.15
SFXN3-201ENST00000224807 KRT12Q99456 494 aa15.97■□□□□ 0.15
SFXN3-201ENST00000224807 SLC24A3Q9HC58 644 aa15.97■□□□□ 0.15
SFXN3-201ENST00000224807 VAT1LQ9HCJ6 419 aa15.97■□□□□ 0.15
SFXN3-201ENST00000224807 RWDD2AQ9UIY3 292 aa15.97■□□□□ 0.15
SFXN3-201ENST00000224807 PSMA7O14818 248 aa15.96■□□□□ 0.15
SFXN3-201ENST00000224807 EIF4A3P38919 411 aaKnown RBP15.96■□□□□ 0.15
SFXN3-201ENST00000224807 GFPT1Q06210 699 aaPredicted RBP15.96■□□□□ 0.15
SFXN3-201ENST00000224807 IL17AQ16552 155 aa15.96■□□□□ 0.15
SFXN3-201ENST00000224807 CACNA2D4Q7Z3S7 1137 aa15.96■□□□□ 0.15
SFXN3-201ENST00000224807 TBC1D31Q96DN5 1066 aa15.96■□□□□ 0.15
SFXN3-201ENST00000224807 LIMA1Q9UHB6 759 aaKnown RBP15.96■□□□□ 0.15
SFXN3-201ENST00000224807 GOLGA6L7A0A1B0GV03 622 aa15.96■□□□□ 0.15
SFXN3-201ENST00000224807 NUTM2BA6NNL0 878 aaPredicted RBP15.96■□□□□ 0.15
SFXN3-201ENST00000224807 NUTM2EB1AL46 878 aaPredicted RBP15.96■□□□□ 0.15
SFXN3-201ENST00000224807 PSMD14O00487 310 aa15.96■□□□□ 0.15
SFXN3-201ENST00000224807 EPHB6O15197 1021 aa15.96■□□□□ 0.15
SFXN3-201ENST00000224807 RPS6KA5O75582 802 aa15.96■□□□□ 0.15
SFXN3-201ENST00000224807 PDE8BO95263 885 aa15.96■□□□□ 0.15
SFXN3-201ENST00000224807 SF3B2Q13435 895 aaKnown RBP15.96■□□□□ 0.15
SFXN3-201ENST00000224807 TUBB2AQ13885 445 aa15.96■□□□□ 0.15
SFXN3-201ENST00000224807 INF2Q27J81 1249 aa15.96■□□□□ 0.15
SFXN3-201ENST00000224807 ENAHQ8N8S7 591 aaPredicted RBP15.96■□□□□ 0.15
SFXN3-201ENST00000224807 CNOT6LQ96LI5 555 aaKnown RBP15.96■□□□□ 0.15
SFXN3-201ENST00000224807 TUBB2BQ9BVA1 445 aa15.96■□□□□ 0.15
SFXN3-201ENST00000224807 ASAP1Q9ULH1 1129 aa15.96■□□□□ 0.15
SFXN3-201ENST00000224807 ZNF263O14978 683 aa15.96■□□□□ 0.14
SFXN3-201ENST00000224807 OPA1O60313 960 aa15.96■□□□□ 0.14
SFXN3-201ENST00000224807 USO1O60763 962 aaKnown RBP15.96■□□□□ 0.14
SFXN3-201ENST00000224807 HEXIM1O94992 359 aaKnown RBP15.96■□□□□ 0.14
SFXN3-201ENST00000224807 TMOD1P28289 359 aa15.96■□□□□ 0.14
SFXN3-201ENST00000224807 ATP6V1AP38606 617 aa15.96■□□□□ 0.14
SFXN3-201ENST00000224807 CDR1P51861 262 aa15.96■□□□□ 0.14
SFXN3-201ENST00000224807 DDX42Q86XP3 938 aaKnown RBP eCLIP15.96■□□□□ 0.14
SFXN3-201ENST00000224807 KSR1Q8IVT5 923 aa15.96■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms