RNA–Protein interactions for RNA: ENST00000222402.7

UBE2D4-201, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE2D4, Length 3,974 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-201ENST00000222402 KIF20AO95235 890 aa16.73■□□□□ 0.27
UBE2D4-201ENST00000222402 PLCG1P19174 1290 aa16.73■□□□□ 0.27
UBE2D4-201ENST00000222402 CDK8P49336 464 aa16.73■□□□□ 0.27
UBE2D4-201ENST00000222402 ADCY7P51828 1080 aa16.73■□□□□ 0.27
UBE2D4-201ENST00000222402 MDM2Q00987 491 aaPredicted RBP16.73■□□□□ 0.27
UBE2D4-201ENST00000222402 NOC3LQ8WTT2 800 aaKnown RBP16.73■□□□□ 0.27
UBE2D4-201ENST00000222402 CRACR2AQ9BSW2 395 aa16.73■□□□□ 0.27
UBE2D4-201ENST00000222402 CDC23Q9UJX2 597 aa16.73■□□□□ 0.27
UBE2D4-201ENST00000222402 SIPA1L3O60292 1781 aaPredicted RBP16.73■□□□□ 0.27
UBE2D4-201ENST00000222402 LRRN4CLQ8ND94 238 aa16.73■□□□□ 0.27
UBE2D4-201ENST00000222402 TBCKQ8TEA7 893 aa16.73■□□□□ 0.27
UBE2D4-201ENST00000222402 L2HGDHQ9H9P8 463 aa16.73■□□□□ 0.27
UBE2D4-201ENST00000222402 TUBGCP2Q9BSJ2 902 aa16.73■□□□□ 0.27
UBE2D4-201ENST00000222402 MRPL44Q9H9J2 332 aaKnown RBP16.73■□□□□ 0.27
UBE2D4-201ENST00000222402 FAM207AQ9NSI2 230 aaPredicted RBP16.73■□□□□ 0.27
UBE2D4-201ENST00000222402 SPATA31A5Q5VU36 1347 aa16.73■□□□□ 0.27
UBE2D4-201ENST00000222402 SPATA31A7Q8IWB4 1347 aa16.73■□□□□ 0.27
UBE2D4-201ENST00000222402 PNMA6AP0CW24 399 aaPredicted RBP16.72■□□□□ 0.27
UBE2D4-201ENST00000222402 DNM2P50570 870 aa16.72■□□□□ 0.27
UBE2D4-201ENST00000222402 RABGGTAQ92696 567 aa16.72■□□□□ 0.27
UBE2D4-201ENST00000222402 JAKMIP2Q96AA8 810 aa16.72■□□□□ 0.27
UBE2D4-201ENST00000222402 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.72■□□□□ 0.27
UBE2D4-201ENST00000222402 FXR1P51114 621 aaKnown RBP eCLIP16.72■□□□□ 0.27
UBE2D4-201ENST00000222402 NFIXQ14938 502 aa16.72■□□□□ 0.27
UBE2D4-201ENST00000222402 MAP9Q49MG5 647 aa16.72■□□□□ 0.27
UBE2D4-201ENST00000222402 ZNF622Q969S3 477 aaKnown RBP eCLIP16.72■□□□□ 0.27
UBE2D4-201ENST00000222402 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.72■□□□□ 0.27
UBE2D4-201ENST00000222402 VEGFAP15692 232 aaPredicted RBP16.72■□□□□ 0.27
UBE2D4-201ENST00000222402 ZNF18P17022 549 aa16.72■□□□□ 0.27
UBE2D4-201ENST00000222402 SARSP49591 514 aaKnown RBP16.72■□□□□ 0.27
UBE2D4-201ENST00000222402 ARID5AQ03989 594 aa16.72■□□□□ 0.27
UBE2D4-201ENST00000222402 SRGAP1Q7Z6B7 1085 aa16.72■□□□□ 0.27
UBE2D4-201ENST00000222402 CERS3Q8IU89 383 aa16.72■□□□□ 0.27
UBE2D4-201ENST00000222402 COA7Q96BR5 231 aa16.72■□□□□ 0.27
UBE2D4-201ENST00000222402 PARD6BQ9BYG5 372 aa16.72■□□□□ 0.27
UBE2D4-201ENST00000222402 INTS13Q9NVM9 706 aa16.72■□□□□ 0.27
UBE2D4-201ENST00000222402 SPEF2Q9C093 1822 aa16.71■□□□□ 0.27
UBE2D4-201ENST00000222402 ENC1O14682 589 aa16.71■□□□□ 0.27
UBE2D4-201ENST00000222402 ATP2B4P23634 1241 aa16.71■□□□□ 0.27
UBE2D4-201ENST00000222402 OAS2P29728 719 aaKnown RBP16.71■□□□□ 0.27
UBE2D4-201ENST00000222402 SBK1Q52WX2 424 aa16.71■□□□□ 0.27
UBE2D4-201ENST00000222402 DPP8Q6V1X1 898 aaPredicted RBP16.71■□□□□ 0.27
UBE2D4-201ENST00000222402 RAD9BQ6WBX8 426 aa16.71■□□□□ 0.27
UBE2D4-201ENST00000222402 LRRC27Q9C0I9 530 aa16.71■□□□□ 0.27
UBE2D4-201ENST00000222402 PARP3Q9Y6F1 533 aa16.71■□□□□ 0.27
UBE2D4-201ENST00000222402 TRAF5O00463 557 aa16.71■□□□□ 0.27
UBE2D4-201ENST00000222402 TADA3O75528 432 aa16.71■□□□□ 0.27
UBE2D4-201ENST00000222402 ZSCAN20P17040 1043 aaPredicted RBP16.71■□□□□ 0.27
UBE2D4-201ENST00000222402 RAD51AP2Q09MP3 1159 aa16.71■□□□□ 0.27
UBE2D4-201ENST00000222402 GRM4Q14833 912 aa16.71■□□□□ 0.27
UBE2D4-201ENST00000222402 TBC1D22AQ8WUA7 517 aa16.71■□□□□ 0.27
UBE2D4-201ENST00000222402 MORC2Q9Y6X9 1032 aaPredicted RBP16.71■□□□□ 0.27
UBE2D4-201ENST00000222402 PPP1R3GB7ZBB8 358 aa16.71■□□□□ 0.27
UBE2D4-201ENST00000222402 SMC1AQ14683 1233 aaKnown RBP16.71■□□□□ 0.27
UBE2D4-201ENST00000222402 TBC1D7Q9P0N9 293 aa16.71■□□□□ 0.27
UBE2D4-201ENST00000222402 SCNN1DP51172 638 aa16.7■□□□□ 0.26
UBE2D4-201ENST00000222402 MRPL12P52815 198 aaKnown RBP16.7■□□□□ 0.26
UBE2D4-201ENST00000222402 TXLNBQ8N3L3 684 aa16.7■□□□□ 0.26
UBE2D4-201ENST00000222402 CNOT6LQ96LI5 555 aaKnown RBP16.7■□□□□ 0.26
UBE2D4-201ENST00000222402 ALS2CR12Q96Q35 445 aa16.7■□□□□ 0.26
UBE2D4-201ENST00000222402 SH3GLB2Q9NR46 395 aa16.7■□□□□ 0.26
UBE2D4-201ENST00000222402 ABHD10Q9NUJ1 306 aa16.7■□□□□ 0.26
UBE2D4-201ENST00000222402 WNT7AO00755 349 aa16.7■□□□□ 0.26
UBE2D4-201ENST00000222402 TACC1O75410 805 aa16.7■□□□□ 0.26
UBE2D4-201ENST00000222402 PAFAH1B1P43034 410 aa16.7■□□□□ 0.26
UBE2D4-201ENST00000222402 TCERG1LQ5VWI1 586 aa16.7■□□□□ 0.26
UBE2D4-201ENST00000222402 TMEM60Q9H2L4 133 aa16.7■□□□□ 0.26
UBE2D4-201ENST00000222402 ST7Q9NRC1 585 aa16.7■□□□□ 0.26
UBE2D4-201ENST00000222402 EEF1GP26641 437 aaKnown RBP16.7■□□□□ 0.26
UBE2D4-201ENST00000222402 CKAP4Q07065 602 aaKnown RBP16.7■□□□□ 0.26
UBE2D4-201ENST00000222402 CD209Q9NNX6 404 aa16.7■□□□□ 0.26
UBE2D4-201ENST00000222402 CWC15Q9P013 229 aaKnown RBP16.7■□□□□ 0.26
UBE2D4-201ENST00000222402 VPS18Q9P253 973 aa16.7■□□□□ 0.26
UBE2D4-201ENST00000222402 LAD1O00515 517 aa16.7■□□□□ 0.26
UBE2D4-201ENST00000222402 PPP1R2P41236 205 aa16.7■□□□□ 0.26
UBE2D4-201ENST00000222402 TUBB2AQ13885 445 aa16.7■□□□□ 0.26
UBE2D4-201ENST00000222402 NT5DC1Q5TFE4 455 aa16.7■□□□□ 0.26
UBE2D4-201ENST00000222402 NEK11Q8NG66 645 aa16.7■□□□□ 0.26
UBE2D4-201ENST00000222402 TUBB2BQ9BVA1 445 aa16.7■□□□□ 0.26
UBE2D4-201ENST00000222402 NUP58Q9BVL2 599 aa16.7■□□□□ 0.26
UBE2D4-201ENST00000222402 BARHL2Q9NY43 387 aa16.7■□□□□ 0.26
UBE2D4-201ENST00000222402 TXNRD1Q16881 649 aa16.69■□□□□ 0.26
UBE2D4-201ENST00000222402 UTP14CQ5TAP6 766 aaKnown RBP16.69■□□□□ 0.26
UBE2D4-201ENST00000222402 HDXQ7Z353 690 aa16.69■□□□□ 0.26
UBE2D4-201ENST00000222402 P2RX5Q93086 422 aa16.69■□□□□ 0.26
UBE2D4-201ENST00000222402 HSD3B7Q9H2F3 369 aa16.69■□□□□ 0.26
UBE2D4-201ENST00000222402 MYO6Q9UM54 1294 aa16.69■□□□□ 0.26
UBE2D4-201ENST00000222402 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.69■□□□□ 0.26
UBE2D4-201ENST00000222402 SERPINB2P05120 415 aa16.69■□□□□ 0.26
UBE2D4-201ENST00000222402 TCP10Q12799 353 aa16.69■□□□□ 0.26
UBE2D4-201ENST00000222402 TYW1BQ6NUM6 668 aa16.69■□□□□ 0.26
UBE2D4-201ENST00000222402 CALCOCO1Q9P1Z2 691 aa16.69■□□□□ 0.26
UBE2D4-201ENST00000222402 PCDHA6Q9UN73 950 aa16.69■□□□□ 0.26
UBE2D4-201ENST00000222402 PCDHA8Q9Y5H6 950 aa16.69■□□□□ 0.26
UBE2D4-201ENST00000222402 MCM3P25205 808 aa16.69■□□□□ 0.26
UBE2D4-201ENST00000222402 C2CD5Q86YS7 1000 aa16.69■□□□□ 0.26
UBE2D4-201ENST00000222402 CEP95Q96GE4 821 aa16.69■□□□□ 0.26
UBE2D4-201ENST00000222402 PSMB7Q99436 277 aa16.69■□□□□ 0.26
UBE2D4-201ENST00000222402 USP40Q9NVE5 1235 aa16.69■□□□□ 0.26
UBE2D4-201ENST00000222402 MRFAP1Q9Y605 127 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms