RNA–Protein interactions for RNA: ENST00000220888.9

TRPS1-201, Transcript of transcriptional repressor GATA binding 1, humanhuman

TSL 1 (best) BASIC

Gene TRPS1, Length 5,480 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPS1-201ENST00000220888 KRT33BQ14525 404 aa11.59□□□□□ -0.55
TRPS1-201ENST00000220888 NEK8Q86SG6 692 aa11.59□□□□□ -0.55
TRPS1-201ENST00000220888 MAP7D3Q8IWC1 876 aa11.59□□□□□ -0.55
TRPS1-201ENST00000220888 CACTINQ8WUQ7 758 aaKnown RBP11.59□□□□□ -0.55
TRPS1-201ENST00000220888 TMEM106CQ9BVX2 250 aa11.59□□□□□ -0.55
TRPS1-201ENST00000220888 PIM2Q9P1W9 311 aa11.59□□□□□ -0.55
TRPS1-201ENST00000220888 WDR64B1ANS9 1081 aa11.58□□□□□ -0.56
TRPS1-201ENST00000220888 ZNF131P52739 623 aa11.58□□□□□ -0.56
TRPS1-201ENST00000220888 SEPT6Q14141 434 aa11.58□□□□□ -0.56
TRPS1-201ENST00000220888 POSTNQ15063 836 aa11.58□□□□□ -0.56
TRPS1-201ENST00000220888 RINT1Q6NUQ1 792 aa11.58□□□□□ -0.56
TRPS1-201ENST00000220888 FASTKD5Q7L8L6 764 aaKnown RBP11.58□□□□□ -0.56
TRPS1-201ENST00000220888 ELMOD1Q8N336 334 aa11.58□□□□□ -0.56
TRPS1-201ENST00000220888 TBRG4Q969Z0 631 aaKnown RBP eCLIP11.58□□□□□ -0.56
TRPS1-201ENST00000220888 COA7Q96BR5 231 aa11.58□□□□□ -0.56
TRPS1-201ENST00000220888 KRT12Q99456 494 aa11.58□□□□□ -0.56
TRPS1-201ENST00000220888 UBN1Q9NPG3 1134 aa11.58□□□□□ -0.56
TRPS1-201ENST00000220888 USP19O94966 1318 aa11.58□□□□□ -0.56
TRPS1-201ENST00000220888 ATP10BO94823 1461 aa11.58□□□□□ -0.56
TRPS1-201ENST00000220888 F8W8V4 182 aa11.58□□□□□ -0.56
TRPS1-201ENST00000220888 HNRNPDLO14979 420 aaKnown RBP11.58□□□□□ -0.56
TRPS1-201ENST00000220888 GOLGA8HP0CJ92 632 aa11.58□□□□□ -0.56
TRPS1-201ENST00000220888 CAPN2P17655 700 aa11.58□□□□□ -0.56
TRPS1-201ENST00000220888 CCND2P30279 289 aa11.58□□□□□ -0.56
TRPS1-201ENST00000220888 TECP42680 631 aa11.58□□□□□ -0.56
TRPS1-201ENST00000220888 MAPK8IP2Q13387 824 aaPredicted RBP11.58□□□□□ -0.56
TRPS1-201ENST00000220888 MCUR1Q96AQ8 359 aa11.58□□□□□ -0.56
TRPS1-201ENST00000220888 IQCDQ96DY2 449 aa11.58□□□□□ -0.56
TRPS1-201ENST00000220888 NEURL1BA8MQ27 555 aa11.58□□□□□ -0.56
TRPS1-201ENST00000220888 PCCAP05165 728 aaPredicted RBP11.58□□□□□ -0.56
TRPS1-201ENST00000220888 SRGAP2BP0DMP2 458 aa11.58□□□□□ -0.56
TRPS1-201ENST00000220888 GALNT17Q6IS24 598 aa11.58□□□□□ -0.56
TRPS1-201ENST00000220888 LSM14BQ9BX40 385 aaKnown RBP11.58□□□□□ -0.56
TRPS1-201ENST00000220888 IFT122Q9HBG6 1241 aa11.58□□□□□ -0.56
TRPS1-201ENST00000220888 TSKSQ9UJT2 592 aa11.58□□□□□ -0.56
TRPS1-201ENST00000220888 AOX1Q06278 1338 aa11.58□□□□□ -0.56
TRPS1-201ENST00000220888 KRT3P12035 628 aa11.58□□□□□ -0.56
TRPS1-201ENST00000220888 GPATCH4Q5T3I0 446 aaKnown RBP11.58□□□□□ -0.56
TRPS1-201ENST00000220888 KLHL7Q8IXQ5 586 aa11.58□□□□□ -0.56
TRPS1-201ENST00000220888 SNX21Q969T3 373 aa11.58□□□□□ -0.56
TRPS1-201ENST00000220888 NLRC4Q9NPP4 1024 aa11.58□□□□□ -0.56
TRPS1-201ENST00000220888 PRDM10Q9NQV6 1147 aa11.58□□□□□ -0.56
TRPS1-201ENST00000220888 ARMCX3Q9UH62 379 aaPredicted RBP11.58□□□□□ -0.56
TRPS1-201ENST00000220888 NDUFB9Q9Y6M9 179 aa11.58□□□□□ -0.56
TRPS1-201ENST00000220888 GBP6Q6ZN66 633 aa11.57□□□□□ -0.56
TRPS1-201ENST00000220888 NBPF11Q86T75 865 aa11.57□□□□□ -0.56
TRPS1-201ENST00000220888 GPIHBP1Q8IV16 184 aa11.57□□□□□ -0.56
TRPS1-201ENST00000220888 PPM1KQ8N3J5 372 aa11.57□□□□□ -0.56
TRPS1-201ENST00000220888 SDR42E1Q8WUS8 393 aa11.57□□□□□ -0.56
TRPS1-201ENST00000220888 DSCC1Q9BVC3 393 aa11.57□□□□□ -0.56
TRPS1-201ENST00000220888 AMFRQ9UKV5 643 aa11.57□□□□□ -0.56
TRPS1-201ENST00000220888 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.57□□□□□ -0.56
TRPS1-201ENST00000220888 RRAGAQ7L523 313 aa11.57□□□□□ -0.56
TRPS1-201ENST00000220888 SEPT12Q8IYM1 358 aa11.57□□□□□ -0.56
TRPS1-201ENST00000220888 IFNL3Q8IZI9 196 aa11.57□□□□□ -0.56
TRPS1-201ENST00000220888 ARHGAP24Q8N264 748 aa11.57□□□□□ -0.56
TRPS1-201ENST00000220888 GDAP1Q8TB36 358 aa11.57□□□□□ -0.56
TRPS1-201ENST00000220888 BLZF1Q9H2G9 400 aa11.57□□□□□ -0.56
TRPS1-201ENST00000220888 FAM207AQ9NSI2 230 aaPredicted RBP11.57□□□□□ -0.56
TRPS1-201ENST00000220888 MAP3K15Q6ZN16 1313 aa11.57□□□□□ -0.56
TRPS1-201ENST00000220888 MYL3P08590 195 aa11.57□□□□□ -0.56
TRPS1-201ENST00000220888 PHBP35232 272 aa11.57□□□□□ -0.56
TRPS1-201ENST00000220888 LRCH2Q5VUJ6 765 aa11.57□□□□□ -0.56
TRPS1-201ENST00000220888 PANK4Q9NVE7 773 aa11.57□□□□□ -0.56
TRPS1-201ENST00000220888 VPS18Q9P253 973 aa11.57□□□□□ -0.56
TRPS1-201ENST00000220888 IL13P35225 146 aa11.57□□□□□ -0.56
TRPS1-201ENST00000220888 EIF4A1P60842 406 aaKnown RBP11.57□□□□□ -0.56
TRPS1-201ENST00000220888 FAM182BQ5T319 152 aa11.57□□□□□ -0.56
TRPS1-201ENST00000220888 EEPD1Q7L9B9 569 aa11.57□□□□□ -0.56
TRPS1-201ENST00000220888 EFCAB13Q8IY85 973 aa11.57□□□□□ -0.56
TRPS1-201ENST00000220888 PSPC1Q8WXF1 523 aaKnown RBP11.57□□□□□ -0.56
TRPS1-201ENST00000220888 RILPQ96NA2 401 aa11.57□□□□□ -0.56
TRPS1-201ENST00000220888 OR52Z1P0C646 297 aa11.56□□□□□ -0.56
TRPS1-201ENST00000220888 PDE6AP16499 860 aa11.56□□□□□ -0.56
TRPS1-201ENST00000220888 PPFIA1Q13136 1202 aa11.56□□□□□ -0.56
TRPS1-201ENST00000220888 MYLK4Q86YV6 388 aaPredicted RBP11.56□□□□□ -0.56
TRPS1-201ENST00000220888 TMTC1Q8IUR5 882 aa11.56□□□□□ -0.56
TRPS1-201ENST00000220888 CACNA2D3Q8IZS8 1091 aa11.56□□□□□ -0.56
TRPS1-201ENST00000220888 HDAC11Q96DB2 347 aa11.56□□□□□ -0.56
TRPS1-201ENST00000220888 RABGAP1Q9Y3P9 1069 aa11.56□□□□□ -0.56
TRPS1-201ENST00000220888 RIPOR2Q9Y4F9 1068 aa11.56□□□□□ -0.56
TRPS1-201ENST00000220888 PSDA5PKW4 1024 aaPredicted RBP11.56□□□□□ -0.56
TRPS1-201ENST00000220888 ABCB4P21439 1286 aa11.56□□□□□ -0.56
TRPS1-201ENST00000220888 GRK7Q8WTQ7 553 aa11.56□□□□□ -0.56
TRPS1-201ENST00000220888 RNF139Q8WU17 664 aa11.56□□□□□ -0.56
TRPS1-201ENST00000220888 STAMQ92783 540 aa11.56□□□□□ -0.56
TRPS1-201ENST00000220888 ZNF577Q9BSK1 485 aa11.56□□□□□ -0.56
TRPS1-201ENST00000220888 ZBTB40Q9NUA8 1239 aa11.56□□□□□ -0.56
TRPS1-201ENST00000220888 BCAP29Q9UHQ4 241 aa11.56□□□□□ -0.56
TRPS1-201ENST00000220888 SAT1P21673 171 aa11.56□□□□□ -0.56
TRPS1-201ENST00000220888 TUBB2AQ13885 445 aa11.56□□□□□ -0.56
TRPS1-201ENST00000220888 LONRF2Q1L5Z9 754 aa11.56□□□□□ -0.56
TRPS1-201ENST00000220888 RNF219Q5W0B1 726 aaPredicted RBP11.56□□□□□ -0.56
TRPS1-201ENST00000220888 CEP57Q86XR8 500 aa11.56□□□□□ -0.56
TRPS1-201ENST00000220888 TUBB2BQ9BVA1 445 aa11.56□□□□□ -0.56
TRPS1-201ENST00000220888 KANSL2Q9H9L4 492 aa11.56□□□□□ -0.56
TRPS1-201ENST00000220888 EPHB1P54762 984 aa11.56□□□□□ -0.56
TRPS1-201ENST00000220888 BPIFB4P59827 614 aa11.56□□□□□ -0.56
TRPS1-201ENST00000220888 NXNQ6DKJ4 435 aa11.56□□□□□ -0.56
TRPS1-201ENST00000220888 RUFY4Q6ZNE9 571 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms