RNA–Protein interactions for RNA: ENST00000216877.10

PTPRA-201, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRA, Length 3,725 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-201ENST00000216877 KCNQ3O43525 872 aa16.25■□□□□ 0.19
PTPRA-201ENST00000216877 RAB27AP51159 221 aa16.25■□□□□ 0.19
PTPRA-201ENST00000216877 KIF2BQ8N4N8 673 aa16.25■□□□□ 0.19
PTPRA-201ENST00000216877 AGAP11Q8TF27 550 aa16.25■□□□□ 0.19
PTPRA-201ENST00000216877 HPSEQ9Y251 543 aa16.25■□□□□ 0.19
PTPRA-201ENST00000216877 CD2APQ9Y5K6 639 aa16.25■□□□□ 0.19
PTPRA-201ENST00000216877 BUB1O43683 1085 aa16.24■□□□□ 0.19
PTPRA-201ENST00000216877 AKR1B10O60218 316 aa16.24■□□□□ 0.19
PTPRA-201ENST00000216877 PDCD2Q16342 344 aaPredicted RBP16.24■□□□□ 0.19
PTPRA-201ENST00000216877 TRIM4Q9C037 500 aa16.24■□□□□ 0.19
PTPRA-201ENST00000216877 USP42Q9H9J4 1324 aaKnown RBP16.24■□□□□ 0.19
PTPRA-201ENST00000216877 LRRD1A4D1F6 860 aa16.24■□□□□ 0.19
PTPRA-201ENST00000216877 CTNNA1P35221 906 aaKnown RBP16.24■□□□□ 0.19
PTPRA-201ENST00000216877 MAP3K12Q12852 859 aa16.24■□□□□ 0.19
PTPRA-201ENST00000216877 MORC3Q14149 939 aa16.24■□□□□ 0.19
PTPRA-201ENST00000216877 MIS18BP1Q6P0N0 1132 aa16.24■□□□□ 0.19
PTPRA-201ENST00000216877 KRT12Q99456 494 aa16.24■□□□□ 0.19
PTPRA-201ENST00000216877 REXO2Q9Y3B8 237 aaKnown RBP16.24■□□□□ 0.19
PTPRA-201ENST00000216877 PPP6R2O75170 966 aa16.24■□□□□ 0.19
PTPRA-201ENST00000216877 HSPD1P10809 573 aaKnown RBP16.24■□□□□ 0.19
PTPRA-201ENST00000216877 DRP2Q13474 957 aa16.24■□□□□ 0.19
PTPRA-201ENST00000216877 LRRC23Q53EV4 343 aaPredicted RBP16.24■□□□□ 0.19
PTPRA-201ENST00000216877 USPL1Q5W0Q7 1092 aa16.24■□□□□ 0.19
PTPRA-201ENST00000216877 MDM1Q8TC05 714 aa16.24■□□□□ 0.19
PTPRA-201ENST00000216877 ORAI2Q96SN7 254 aa16.24■□□□□ 0.19
PTPRA-201ENST00000216877 PANK4Q9NVE7 773 aa16.24■□□□□ 0.19
PTPRA-201ENST00000216877 MAGEC2Q9UBF1 373 aaPredicted RBP16.24■□□□□ 0.19
PTPRA-201ENST00000216877 SETD1BQ9UPS6 1966 aaKnown RBP16.24■□□□□ 0.19
PTPRA-201ENST00000216877 LTN1O94822 1766 aa16.23■□□□□ 0.19
PTPRA-201ENST00000216877 IFNAR2P48551 515 aa16.23■□□□□ 0.19
PTPRA-201ENST00000216877 MPRIPQ6WCQ1 1025 aa16.23■□□□□ 0.19
PTPRA-201ENST00000216877 IL17REQ8NFR9 667 aa16.23■□□□□ 0.19
PTPRA-201ENST00000216877 BORCS6Q96GS4 357 aa16.23■□□□□ 0.19
PTPRA-201ENST00000216877 TSGA10Q9BZW7 698 aa16.23■□□□□ 0.19
PTPRA-201ENST00000216877 GOPCQ9HD26 462 aa16.23■□□□□ 0.19
PTPRA-201ENST00000216877 ROBO2Q9HCK4 1378 aa16.23■□□□□ 0.19
PTPRA-201ENST00000216877 TTC36A6NLP5 189 aa16.23■□□□□ 0.19
PTPRA-201ENST00000216877 KCNJ18B7U540 433 aa16.23■□□□□ 0.19
PTPRA-201ENST00000216877 CTNND1O60716 968 aaKnown RBP16.23■□□□□ 0.19
PTPRA-201ENST00000216877 KCNJ12Q14500 433 aa16.23■□□□□ 0.19
PTPRA-201ENST00000216877 KRT71Q3SY84 523 aa16.23■□□□□ 0.19
PTPRA-201ENST00000216877 VPS54Q9P1Q0 977 aa16.23■□□□□ 0.19
PTPRA-201ENST00000216877 GRM8O00222 908 aa16.23■□□□□ 0.19
PTPRA-201ENST00000216877 ERCC5P28715 1186 aaPredicted RBP16.23■□□□□ 0.19
PTPRA-201ENST00000216877 EXOSC10Q01780 885 aaKnown RBP16.23■□□□□ 0.19
PTPRA-201ENST00000216877 ICA1Q05084 483 aa16.23■□□□□ 0.19
PTPRA-201ENST00000216877 OSBPL9Q96SU4 736 aa16.23■□□□□ 0.19
PTPRA-201ENST00000216877 RBM12Q9NTZ6 932 aaKnown RBP16.23■□□□□ 0.19
PTPRA-201ENST00000216877 COL15A1P39059 1388 aa16.22■□□□□ 0.19
PTPRA-201ENST00000216877 RCCD1A6NED2 376 aa16.22■□□□□ 0.19
PTPRA-201ENST00000216877 MYL6BP14649 208 aa16.22■□□□□ 0.19
PTPRA-201ENST00000216877 PRPHP41219 470 aa16.22■□□□□ 0.19
PTPRA-201ENST00000216877 HERVK_113P62684 666 aa16.22■□□□□ 0.19
PTPRA-201ENST00000216877 CCDC178Q5BJE1 867 aa16.22■□□□□ 0.19
PTPRA-201ENST00000216877 SPICE1Q8N0Z3 855 aa16.22■□□□□ 0.19
PTPRA-201ENST00000216877 CMTR1Q8N1G2 835 aaKnown RBP16.22■□□□□ 0.19
PTPRA-201ENST00000216877 CCDC197Q8NCU1 140 aa16.22■□□□□ 0.19
PTPRA-201ENST00000216877 LRRC59Q96AG4 307 aaKnown RBP16.22■□□□□ 0.19
PTPRA-201ENST00000216877 EPSTI1Q96J88 318 aa16.22■□□□□ 0.19
PTPRA-201ENST00000216877 ELAC2Q9BQ52 826 aaKnown RBP16.22■□□□□ 0.19
PTPRA-201ENST00000216877 ABCF2Q9UG63 623 aa16.22■□□□□ 0.19
PTPRA-201ENST00000216877 ADAMTS7Q9UKP4 1686 aa16.22■□□□□ 0.19
PTPRA-201ENST00000216877 HHATQ5VTY9 493 aa16.22■□□□□ 0.19
PTPRA-201ENST00000216877 TYW1BQ6NUM6 668 aa16.22■□□□□ 0.19
PTPRA-201ENST00000216877 EZH1Q92800 747 aaPredicted RBP16.22■□□□□ 0.19
PTPRA-201ENST00000216877 ALS2CR12Q96Q35 445 aa16.22■□□□□ 0.19
PTPRA-201ENST00000216877 EYA1Q99502 592 aa16.22■□□□□ 0.19
PTPRA-201ENST00000216877 NUTM2BA6NNL0 878 aaPredicted RBP16.22■□□□□ 0.19
PTPRA-201ENST00000216877 NUTM2EB1AL46 878 aaPredicted RBP16.22■□□□□ 0.19
PTPRA-201ENST00000216877 TIMM10P62072 90 aa16.22■□□□□ 0.19
PTPRA-201ENST00000216877 TRADDQ15628 312 aa16.22■□□□□ 0.19
PTPRA-201ENST00000216877 RRP12Q5JTH9 1297 aaKnown RBP16.22■□□□□ 0.19
PTPRA-201ENST00000216877 PAPD7Q5XG87 772 aaKnown RBP16.22■□□□□ 0.19
PTPRA-201ENST00000216877 GLI1P08151 1106 aa16.21■□□□□ 0.19
PTPRA-201ENST00000216877 CSRNP2Q9H175 543 aa16.21■□□□□ 0.19
PTPRA-201ENST00000216877 KANK3Q6NY19 840 aa16.21■□□□□ 0.19
PTPRA-201ENST00000216877 LONP2Q86WA8 852 aa16.21■□□□□ 0.19
PTPRA-201ENST00000216877 TEKT4Q8WW24 435 aa16.21■□□□□ 0.19
PTPRA-201ENST00000216877 LBHD1Q9BQE6 289 aaPredicted RBP16.21■□□□□ 0.19
PTPRA-201ENST00000216877 CABP5Q9NP86 173 aa16.21■□□□□ 0.19
PTPRA-201ENST00000216877 CRB1P82279 1406 aa16.21■□□□□ 0.19
PTPRA-201ENST00000216877 HMGB1P1B2RPK0 211 aaPredicted RBP16.21■□□□□ 0.19
PTPRA-201ENST00000216877 TRIM37O94972 964 aa16.21■□□□□ 0.19
PTPRA-201ENST00000216877 MAGOHP61326 146 aaKnown RBP16.21■□□□□ 0.19
PTPRA-201ENST00000216877 MAGOHBQ96A72 148 aaKnown RBP16.21■□□□□ 0.19
PTPRA-201ENST00000216877 FAM210AQ96ND0 272 aa16.21■□□□□ 0.19
PTPRA-201ENST00000216877 CHCHD3Q9NX63 227 aaKnown RBP16.21■□□□□ 0.19
PTPRA-201ENST00000216877 CEP131Q9UPN4 1083 aa16.21■□□□□ 0.19
PTPRA-201ENST00000216877 GOLGA8AA7E2F4 631 aa16.2■□□□□ 0.18
PTPRA-201ENST00000216877 ECEL1O95672 775 aa16.2■□□□□ 0.18
PTPRA-201ENST00000216877 PTPAQ15257 358 aa16.2■□□□□ 0.18
PTPRA-201ENST00000216877 DIS3L2Q8IYB7 885 aaKnown RBP16.2■□□□□ 0.18
PTPRA-201ENST00000216877 MAB21L3Q8N8X9 362 aa16.2■□□□□ 0.18
PTPRA-201ENST00000216877 KLHL23Q8NBE8 558 aa16.2■□□□□ 0.18
PTPRA-201ENST00000216877 IFIH1Q9BYX4 1025 aaKnown RBP16.2■□□□□ 0.18
PTPRA-201ENST00000216877 TRIM31Q9BZY9 425 aa16.2■□□□□ 0.18
PTPRA-201ENST00000216877 TMX4Q9H1E5 349 aaPredicted RBP16.2■□□□□ 0.18
PTPRA-201ENST00000216877 SAMD15Q9P1V8 674 aa16.2■□□□□ 0.18
PTPRA-201ENST00000216877 A0A1B0GVG6 124 aa16.2■□□□□ 0.18
PTPRA-201ENST00000216877 RAPGEF5Q92565 580 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms