RNA–Protein interactions for RNA: ENST00000216774.10

SRP54-201, Transcript of signal recognition particle 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRP54, Length 2,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-201ENST00000216774 DHTKD1Q96HY7 919 aaPredicted RBP14.94□□□□□ -0.02
SRP54-201ENST00000216774 CHP1Q99653 195 aa14.94□□□□□ -0.02
SRP54-201ENST00000216774 NYXQ9GZU5 481 aa14.94□□□□□ -0.02
SRP54-201ENST00000216774 MAGEC2Q9UBF1 373 aaPredicted RBP14.94□□□□□ -0.02
SRP54-201ENST00000216774 MKRN1Q9UHC7 482 aaKnown RBP14.94□□□□□ -0.02
SRP54-201ENST00000216774 PCDHA6Q9UN73 950 aa14.94□□□□□ -0.02
SRP54-201ENST00000216774 PCDHA8Q9Y5H6 950 aa14.94□□□□□ -0.02
SRP54-201ENST00000216774 CCDC88AQ3V6T2 1871 aa14.94□□□□□ -0.02
SRP54-201ENST00000216774 TRIM49BA6NDI0 452 aa14.94□□□□□ -0.02
SRP54-201ENST00000216774 H3BQF6 201 aa14.94□□□□□ -0.02
SRP54-201ENST00000216774 DNM2P50570 870 aa14.94□□□□□ -0.02
SRP54-201ENST00000216774 MEA1Q16626 185 aa14.94□□□□□ -0.02
SRP54-201ENST00000216774 MUM1L1Q5H9M0 696 aa14.94□□□□□ -0.02
SRP54-201ENST00000216774 WDR93Q6P2C0 686 aa14.94□□□□□ -0.02
SRP54-201ENST00000216774 RETREG2Q8NC44 543 aa14.94□□□□□ -0.02
SRP54-201ENST00000216774 EHBP1Q8NDI1 1231 aa14.94□□□□□ -0.02
SRP54-201ENST00000216774 TRIM47Q96LD4 638 aa14.94□□□□□ -0.02
SRP54-201ENST00000216774 AK8Q96MA6 479 aa14.94□□□□□ -0.02
SRP54-201ENST00000216774 TCP11L1Q9NUJ3 509 aa14.94□□□□□ -0.02
SRP54-201ENST00000216774 BARHL2Q9NY43 387 aa14.94□□□□□ -0.02
SRP54-201ENST00000216774 MAD2L2Q9UI95 211 aa14.94□□□□□ -0.02
SRP54-201ENST00000216774 NRAPQ86VF7 1730 aa14.93□□□□□ -0.02
SRP54-201ENST00000216774 AHDC1Q5TGY3 1603 aaPredicted RBP14.93□□□□□ -0.02
SRP54-201ENST00000216774 USP17L8P0C7I0 530 aa14.93□□□□□ -0.02
SRP54-201ENST00000216774 SRGNP10124 158 aa14.93□□□□□ -0.02
SRP54-201ENST00000216774 PMS1P54277 932 aaKnown RBP14.93□□□□□ -0.02
SRP54-201ENST00000216774 HNRNPH2P55795 449 aaKnown RBP14.93□□□□□ -0.02
SRP54-201ENST00000216774 KRT83P78385 493 aa14.93□□□□□ -0.02
SRP54-201ENST00000216774 TYW1BQ6NUM6 668 aa14.93□□□□□ -0.02
SRP54-201ENST00000216774 TTI2Q6NXR4 508 aa14.93□□□□□ -0.02
SRP54-201ENST00000216774 TRAPPC11Q7Z392 1133 aa14.93□□□□□ -0.02
SRP54-201ENST00000216774 DZIP1Q86YF9 867 aaKnown RBP14.93□□□□□ -0.02
SRP54-201ENST00000216774 LZTS2Q9BRK4 669 aa14.93□□□□□ -0.02
SRP54-201ENST00000216774 NUP58Q9BVL2 599 aa14.93□□□□□ -0.02
SRP54-201ENST00000216774 ABCB6Q9NP58 842 aa14.93□□□□□ -0.02
SRP54-201ENST00000216774 TFCP2L1Q9NZI6 479 aa14.93□□□□□ -0.02
SRP54-201ENST00000216774 ADAM21Q9UKJ8 722 aa14.93□□□□□ -0.02
SRP54-201ENST00000216774 PPP1R2P41236 205 aa14.92□□□□□ -0.02
SRP54-201ENST00000216774 STAG2Q8N3U4 1231 aa14.92□□□□□ -0.02
SRP54-201ENST00000216774 NEK11Q8NG66 645 aa14.92□□□□□ -0.02
SRP54-201ENST00000216774 RASGRP4Q8TDF6 673 aa14.92□□□□□ -0.02
SRP54-201ENST00000216774 NLRP3Q96P20 1036 aa14.92□□□□□ -0.02
SRP54-201ENST00000216774 TMEM60Q9H2L4 133 aa14.92□□□□□ -0.02
SRP54-201ENST00000216774 BAZ2BQ9UIF8 2168 aaKnown RBP14.92□□□□□ -0.02
SRP54-201ENST00000216774 BICDL2A1A5D9 508 aa14.92□□□□□ -0.02
SRP54-201ENST00000216774 STXBP3O00186 592 aa14.92□□□□□ -0.02
SRP54-201ENST00000216774 RHOXF2BP0C7M4 288 aa14.92□□□□□ -0.02
SRP54-201ENST00000216774 VSNL1P62760 191 aa14.92□□□□□ -0.02
SRP54-201ENST00000216774 MCM6Q14566 821 aa14.92□□□□□ -0.02
SRP54-201ENST00000216774 WDR59Q6PJI9 974 aa14.92□□□□□ -0.02
SRP54-201ENST00000216774 LINC00116Q8NCU8 138 aa14.92□□□□□ -0.02
SRP54-201ENST00000216774 CCDC47Q96A33 483 aaKnown RBP14.92□□□□□ -0.02
SRP54-201ENST00000216774 RHOXF2Q9BQY4 288 aa14.92□□□□□ -0.02
SRP54-201ENST00000216774 PDE11AQ9HCR9 933 aa14.92□□□□□ -0.02
SRP54-201ENST00000216774 GUCA1BQ9UMX6 200 aa14.92□□□□□ -0.02
SRP54-201ENST00000216774 PP2D1A8MPX8 630 aa14.91□□□□□ -0.02
SRP54-201ENST00000216774 INF2Q27J81 1249 aa14.91□□□□□ -0.02
SRP54-201ENST00000216774 TBC1D9BQ66K14 1250 aa14.91□□□□□ -0.02
SRP54-201ENST00000216774 HEATR3Q7Z4Q2 680 aa14.91□□□□□ -0.02
SRP54-201ENST00000216774 AMOTL1Q8IY63 956 aa14.91□□□□□ -0.02
SRP54-201ENST00000216774 EXOC1Q9NV70 894 aa14.91□□□□□ -0.02
SRP54-201ENST00000216774 CNTNAP4Q9C0A0 1308 aa14.91□□□□□ -0.02
SRP54-201ENST00000216774 TFRCP02786 760 aaKnown RBP14.91□□□□□ -0.02
SRP54-201ENST00000216774 MCM3P25205 808 aa14.91□□□□□ -0.02
SRP54-201ENST00000216774 HERVK_113P62684 666 aa14.91□□□□□ -0.02
SRP54-201ENST00000216774 PAPD7Q5XG87 772 aaKnown RBP14.91□□□□□ -0.02
SRP54-201ENST00000216774 FAM114A1Q8IWE2 563 aa14.91□□□□□ -0.02
SRP54-201ENST00000216774 CCDC170Q8IYT3 715 aa14.91□□□□□ -0.02
SRP54-201ENST00000216774 CSGALNACT2Q8N6G5 542 aa14.91□□□□□ -0.02
SRP54-201ENST00000216774 NOA1Q8NC60 698 aaKnown RBP14.91□□□□□ -0.02
SRP54-201ENST00000216774 RPGRIP1Q96KN7 1286 aa14.91□□□□□ -0.02
SRP54-201ENST00000216774 TUBGCP2Q9BSJ2 902 aa14.91□□□□□ -0.02
SRP54-201ENST00000216774 TTYH3Q9C0H2 523 aa14.91□□□□□ -0.02
SRP54-201ENST00000216774 MKNK2Q9HBH9 465 aa14.91□□□□□ -0.02
SRP54-201ENST00000216774 IRS2Q9Y4H2 1338 aa14.91□□□□□ -0.02
SRP54-201ENST00000216774 PALM3A6NDB9 673 aaPredicted RBP14.9□□□□□ -0.02
SRP54-201ENST00000216774 PES1O00541 588 aaKnown RBP14.9□□□□□ -0.02
SRP54-201ENST00000216774 TSPY3P0CV98 308 aa14.9□□□□□ -0.02
SRP54-201ENST00000216774 TSPY8P0CW00 308 aa14.9□□□□□ -0.02
SRP54-201ENST00000216774 CYLC1P35663 651 aaPredicted RBP14.9□□□□□ -0.02
SRP54-201ENST00000216774 CCDC122Q5T0U0 273 aa14.9□□□□□ -0.02
SRP54-201ENST00000216774 NCAPH2Q6IBW4 605 aa14.9□□□□□ -0.02
SRP54-201ENST00000216774 BICDL1Q6ZP65 573 aa14.9□□□□□ -0.02
SRP54-201ENST00000216774 DUSP9Q99956 384 aaKnown RBP14.9□□□□□ -0.02
SRP54-201ENST00000216774 ACBD3Q9H3P7 528 aa14.9□□□□□ -0.02
SRP54-201ENST00000216774 ZNHIT6Q9NWK9 470 aaKnown RBP14.9□□□□□ -0.02
SRP54-201ENST00000216774 FLT1P17948 1338 aa14.9□□□□□ -0.02
SRP54-201ENST00000216774 CYTH3O43739 400 aa14.9□□□□□ -0.02
SRP54-201ENST00000216774 KRT86O43790 486 aa14.9□□□□□ -0.02
SRP54-201ENST00000216774 CCNE1P24864 410 aa14.9□□□□□ -0.02
SRP54-201ENST00000216774 ZBED6P86452 979 aa14.9□□□□□ -0.02
SRP54-201ENST00000216774 CASP8Q14790 479 aa14.9□□□□□ -0.02
SRP54-201ENST00000216774 SLC35G1Q2M3R5 365 aa14.9□□□□□ -0.02
SRP54-201ENST00000216774 COBLL1Q53SF7 1204 aa14.9□□□□□ -0.02
SRP54-201ENST00000216774 FIGNQ5HY92 759 aa14.9□□□□□ -0.02
SRP54-201ENST00000216774 BARGINQ6ZT62 677 aa14.9□□□□□ -0.02
SRP54-201ENST00000216774 KRT25Q7Z3Z0 450 aa14.9□□□□□ -0.02
SRP54-201ENST00000216774 WDR66Q8TBY9 1149 aa14.9□□□□□ -0.02
SRP54-201ENST00000216774 P2RX5Q93086 422 aa14.9□□□□□ -0.02
SRP54-201ENST00000216774 IQCDQ96DY2 449 aa14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms