RNA–Protein interactions for RNA: ENST00000216211.8

UPK3A-201, Transcript of uroplakin 3A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene UPK3A, Length 1,051 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3A-201ENST00000216211 FAM184BQ9ULE4 1060 aa17.77■□□□□ 0.44
UPK3A-201ENST00000216211 LRRC37A2A6NM11 1700 aa17.77■□□□□ 0.44
UPK3A-201ENST00000216211 A0A0D9SFI3 127 aa17.76■□□□□ 0.43
UPK3A-201ENST00000216211 TRIM43BA6NCK2 446 aa17.76■□□□□ 0.43
UPK3A-201ENST00000216211 RANBP6O60518 1105 aaKnown RBP17.76■□□□□ 0.43
UPK3A-201ENST00000216211 FDX1P10109 184 aa17.76■□□□□ 0.43
UPK3A-201ENST00000216211 TLE2Q04725 743 aa17.76■□□□□ 0.43
UPK3A-201ENST00000216211 PPP4R3BQ5MIZ7 849 aa17.76■□□□□ 0.43
UPK3A-201ENST00000216211 ZNF467Q7Z7K2 595 aaPredicted RBP17.76■□□□□ 0.43
UPK3A-201ENST00000216211 BADQ92934 168 aa17.76■□□□□ 0.43
UPK3A-201ENST00000216211 TRIM43Q96BQ3 446 aaPredicted RBP17.76■□□□□ 0.43
UPK3A-201ENST00000216211 AGBL1Q96MI9 1066 aa17.76■□□□□ 0.43
UPK3A-201ENST00000216211 LNPKQ9C0E8 428 aa17.76■□□□□ 0.43
UPK3A-201ENST00000216211 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.76■□□□□ 0.43
UPK3A-201ENST00000216211 ANAPC4Q9UJX5 808 aa17.76■□□□□ 0.43
UPK3A-201ENST00000216211 MTMR7Q9Y216 660 aa17.76■□□□□ 0.43
UPK3A-201ENST00000216211 ZNF536O15090 1300 aa17.75■□□□□ 0.43
UPK3A-201ENST00000216211 SNAP25P60880 206 aa17.75■□□□□ 0.43
UPK3A-201ENST00000216211 CNTN2Q02246 1040 aa17.75■□□□□ 0.43
UPK3A-201ENST00000216211 ACVR2BQ13705 512 aa17.75■□□□□ 0.43
UPK3A-201ENST00000216211 ALX1Q15699 326 aa17.75■□□□□ 0.43
UPK3A-201ENST00000216211 MCMDC2Q4G0Z9 681 aa17.75■□□□□ 0.43
UPK3A-201ENST00000216211 CCDC174Q6PII3 467 aa17.75■□□□□ 0.43
UPK3A-201ENST00000216211 ACAD9Q9H845 621 aa17.75■□□□□ 0.43
UPK3A-201ENST00000216211 MYADML2A6NDP7 307 aa17.74■□□□□ 0.43
UPK3A-201ENST00000216211 TRIM6-TRIM34B2RNG4 842 aa17.74■□□□□ 0.43
UPK3A-201ENST00000216211 ADCY6O43306 1168 aa17.74■□□□□ 0.43
UPK3A-201ENST00000216211 FGAP02671 866 aa17.74■□□□□ 0.43
UPK3A-201ENST00000216211 IRX5P78411 483 aaPredicted RBP17.74■□□□□ 0.43
UPK3A-201ENST00000216211 RCSD1Q6JBY9 416 aa17.74■□□□□ 0.43
UPK3A-201ENST00000216211 ARMCX2Q7L311 632 aa17.74■□□□□ 0.43
UPK3A-201ENST00000216211 TSEN34Q9BSV6 310 aaKnown RBP17.74■□□□□ 0.43
UPK3A-201ENST00000216211 TOMM22Q9NS69 142 aa17.74■□□□□ 0.43
UPK3A-201ENST00000216211 RNF146Q9NTX7 359 aa17.74■□□□□ 0.43
UPK3A-201ENST00000216211 MTMR10Q9NXD2 777 aa17.74■□□□□ 0.43
UPK3A-201ENST00000216211 LAMA4Q16363 1823 aa17.73■□□□□ 0.43
UPK3A-201ENST00000216211 ORC4O43929 436 aa17.73■□□□□ 0.43
UPK3A-201ENST00000216211 PLA2G6O60733 806 aa17.73■□□□□ 0.43
UPK3A-201ENST00000216211 PQBP1O60828 265 aaKnown RBP17.73■□□□□ 0.43
UPK3A-201ENST00000216211 DUSP11O75319 330 aaKnown RBP17.73■□□□□ 0.43
UPK3A-201ENST00000216211 CLTBP09497 229 aa17.73■□□□□ 0.43
UPK3A-201ENST00000216211 ALAS1P13196 640 aa17.73■□□□□ 0.43
UPK3A-201ENST00000216211 ACLYP53396 1101 aa17.73■□□□□ 0.43
UPK3A-201ENST00000216211 NMIQ13287 307 aaPredicted RBP17.73■□□□□ 0.43
UPK3A-201ENST00000216211 SHHQ15465 462 aa17.73■□□□□ 0.43
UPK3A-201ENST00000216211 KCNA10Q16322 511 aa17.73■□□□□ 0.43
UPK3A-201ENST00000216211 CCDC144BQ3MJ40 725 aa17.73■□□□□ 0.43
UPK3A-201ENST00000216211 RRP12Q5JTH9 1297 aaKnown RBP17.73■□□□□ 0.43
UPK3A-201ENST00000216211 C9orf50Q5SZB4 431 aa17.73■□□□□ 0.43
UPK3A-201ENST00000216211 B4GALNT3Q6L9W6 998 aa17.73■□□□□ 0.43
UPK3A-201ENST00000216211 ZNF589Q86UQ0 364 aaPredicted RBP17.73■□□□□ 0.43
UPK3A-201ENST00000216211 CCDC144CPQ8IYA2 1237 aa17.73■□□□□ 0.43
UPK3A-201ENST00000216211 SLC17A8Q8NDX2 589 aa17.73■□□□□ 0.43
UPK3A-201ENST00000216211 KLHDC9Q8NEP7 349 aa17.73■□□□□ 0.43
UPK3A-201ENST00000216211 RILPL2Q969X0 211 aa17.73■□□□□ 0.43
UPK3A-201ENST00000216211 TRERF1Q96PN7 1200 aa17.73■□□□□ 0.43
UPK3A-201ENST00000216211 ABHD16BQ9H3Z7 469 aa17.73■□□□□ 0.43
UPK3A-201ENST00000216211 A1CFQ9NQ94 594 aaKnown RBP17.73■□□□□ 0.43
UPK3A-201ENST00000216211 STARD7Q9NQZ5 370 aa17.73■□□□□ 0.43
UPK3A-201ENST00000216211 PRR12Q9ULL5 1215 aa17.73■□□□□ 0.43
UPK3A-201ENST00000216211 POTEB2H3BUK9 544 aa17.72■□□□□ 0.43
UPK3A-201ENST00000216211 FGRP09769 529 aa17.72■□□□□ 0.43
UPK3A-201ENST00000216211 HSPD1P10809 573 aaKnown RBP17.72■□□□□ 0.43
UPK3A-201ENST00000216211 ITGB8P26012 769 aa17.72■□□□□ 0.43
UPK3A-201ENST00000216211 NOVP48745 357 aa17.72■□□□□ 0.43
UPK3A-201ENST00000216211 CCDC96Q2M329 555 aa17.72■□□□□ 0.43
UPK3A-201ENST00000216211 TKFCQ3LXA3 575 aa17.72■□□□□ 0.43
UPK3A-201ENST00000216211 CCSAPQ6IQ19 270 aaPredicted RBP17.72■□□□□ 0.43
UPK3A-201ENST00000216211 FAM133AQ8N9E0 248 aa17.72■□□□□ 0.43
UPK3A-201ENST00000216211 NUP133Q8WUM0 1156 aa17.72■□□□□ 0.43
UPK3A-201ENST00000216211 KATNBL1Q9H079 304 aa17.72■□□□□ 0.43
UPK3A-201ENST00000216211 SOWAHBA6NEL2 793 aa17.71■□□□□ 0.43
UPK3A-201ENST00000216211 MOXD2PA6NHM9 499 aa17.71■□□□□ 0.43
UPK3A-201ENST00000216211 C6orf222P0C671 652 aaPredicted RBP17.71■□□□□ 0.43
UPK3A-201ENST00000216211 HAND2P61296 217 aa17.71■□□□□ 0.43
UPK3A-201ENST00000216211 MUM1L1Q5H9M0 696 aa17.71■□□□□ 0.43
UPK3A-201ENST00000216211 RWDD1Q9H446 243 aaPredicted RBP17.71■□□□□ 0.43
UPK3A-201ENST00000216211 CCDC171Q6TFL3 1326 aa17.71■□□□□ 0.42
UPK3A-201ENST00000216211 C11orf97A0A1B0GVM6 126 aaPredicted RBP17.7■□□□□ 0.42
UPK3A-201ENST00000216211 ASGR1P07306 291 aa17.7■□□□□ 0.42
UPK3A-201ENST00000216211 CST5P28325 142 aaPredicted RBP17.7■□□□□ 0.42
UPK3A-201ENST00000216211 GJA9P57773 515 aa17.7■□□□□ 0.42
UPK3A-201ENST00000216211 IRX6P78412 446 aaPredicted RBP17.7■□□□□ 0.42
UPK3A-201ENST00000216211 AAMPQ13685 434 aa17.7■□□□□ 0.42
UPK3A-201ENST00000216211 TTBK2Q6IQ55 1244 aa17.7■□□□□ 0.42
UPK3A-201ENST00000216211 SMC5Q8IY18 1101 aa17.7■□□□□ 0.42
UPK3A-201ENST00000216211 DCAF4Q8WV16 495 aa17.7■□□□□ 0.42
UPK3A-201ENST00000216211 FAM161BQ96MY7 647 aa17.7■□□□□ 0.42
UPK3A-201ENST00000216211 TMEM47Q9BQJ4 181 aa17.7■□□□□ 0.42
UPK3A-201ENST00000216211 UPF3AQ9H1J1 476 aaKnown RBP17.7■□□□□ 0.42
UPK3A-201ENST00000216211 SPC25Q9HBM1 224 aa17.7■□□□□ 0.42
UPK3A-201ENST00000216211 CCPG1Q9ULG6 757 aa17.7■□□□□ 0.42
UPK3A-201ENST00000216211 DDX49Q9Y6V7 483 aaKnown RBP17.7■□□□□ 0.42
UPK3A-201ENST00000216211 ZMYM6O95789 1325 aa17.7■□□□□ 0.42
UPK3A-201ENST00000216211 KIAA0355O15063 1070 aa17.69■□□□□ 0.42
UPK3A-201ENST00000216211 IGHDP01880 384 aa17.69■□□□□ 0.42
UPK3A-201ENST00000216211 RAG1P15918 1043 aa17.69■□□□□ 0.42
UPK3A-201ENST00000216211 SLC16A2P36021 539 aa17.69■□□□□ 0.42
UPK3A-201ENST00000216211 FAAP100Q0VG06 881 aa17.69■□□□□ 0.42
UPK3A-201ENST00000216211 ANKRD33Q7Z3H0 272 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms