RNA–Protein interactions for RNA: ENST00000215829.7

SNRPD3-201, Transcript of small nuclear ribonucleoprotein D3 polypeptide, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRPD3, Length 1,763 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPD3-201ENST00000215829 NBR1Q14596 966 aa18.31■□□□□ 0.52
SNRPD3-201ENST00000215829 CSPP1Q1MSJ5 1256 aa18.31■□□□□ 0.52
SNRPD3-201ENST00000215829 PRPF38AQ8NAV1 312 aaKnown RBP18.31■□□□□ 0.52
SNRPD3-201ENST00000215829 CNKSR2Q8WXI2 1034 aa18.31■□□□□ 0.52
SNRPD3-201ENST00000215829 AMNQ9BXJ7 453 aa18.31■□□□□ 0.52
SNRPD3-201ENST00000215829 RANBP17Q9H2T7 1088 aaKnown RBP18.31■□□□□ 0.52
SNRPD3-201ENST00000215829 RPAP3Q9H6T3 665 aaPredicted RBP18.31■□□□□ 0.52
SNRPD3-201ENST00000215829 LMBRD1Q9NUN5 540 aa18.31■□□□□ 0.52
SNRPD3-201ENST00000215829 FBXO28Q9NVF7 368 aa18.31■□□□□ 0.52
SNRPD3-201ENST00000215829 TMOD4Q9NZQ9 345 aa18.31■□□□□ 0.52
SNRPD3-201ENST00000215829 M0R2N6 131 aa18.3■□□□□ 0.52
SNRPD3-201ENST00000215829 CHADLQ6NUI6 762 aa18.3■□□□□ 0.52
SNRPD3-201ENST00000215829 FBXO11Q86XK2 927 aa18.3■□□□□ 0.52
SNRPD3-201ENST00000215829 USP28Q96RU2 1077 aa18.3■□□□□ 0.52
SNRPD3-201ENST00000215829 SLF1Q9BQI6 1058 aa18.3■□□□□ 0.52
SNRPD3-201ENST00000215829 TANGO6Q9C0B7 1094 aa18.3■□□□□ 0.52
SNRPD3-201ENST00000215829 PCDHA1Q9Y5I3 950 aa18.3■□□□□ 0.52
SNRPD3-201ENST00000215829 ADAMTS3O15072 1205 aa18.3■□□□□ 0.52
SNRPD3-201ENST00000215829 OTUD5Q96G74 571 aa18.3■□□□□ 0.52
SNRPD3-201ENST00000215829 RTEL1Q9NZ71 1219 aa18.3■□□□□ 0.52
SNRPD3-201ENST00000215829 CXCL11O14625 94 aa18.29■□□□□ 0.52
SNRPD3-201ENST00000215829 IRF6O14896 467 aa18.29■□□□□ 0.52
SNRPD3-201ENST00000215829 ITGBL1O95965 494 aaPredicted RBP18.29■□□□□ 0.52
SNRPD3-201ENST00000215829 TRAF1Q13077 416 aa18.29■□□□□ 0.52
SNRPD3-201ENST00000215829 RILPL1Q5EBL4 403 aa18.29■□□□□ 0.52
SNRPD3-201ENST00000215829 BICD2Q8TD16 824 aa18.29■□□□□ 0.52
SNRPD3-201ENST00000215829 LEO1Q8WVC0 666 aaPredicted RBP18.29■□□□□ 0.52
SNRPD3-201ENST00000215829 SPATA32Q96LK8 384 aa18.29■□□□□ 0.52
SNRPD3-201ENST00000215829 GBA2Q9HCG7 927 aaPredicted RBP18.29■□□□□ 0.52
SNRPD3-201ENST00000215829 PCDHA6Q9UN73 950 aa18.29■□□□□ 0.52
SNRPD3-201ENST00000215829 PCDHA8Q9Y5H6 950 aa18.29■□□□□ 0.52
SNRPD3-201ENST00000215829 ELP1O95163 1332 aa18.28■□□□□ 0.52
SNRPD3-201ENST00000215829 FLOT1O75955 427 aa18.28■□□□□ 0.52
SNRPD3-201ENST00000215829 CELF2O95319 508 aaKnown RBP18.28■□□□□ 0.52
SNRPD3-201ENST00000215829 ADCY7P51828 1080 aa18.28■□□□□ 0.52
SNRPD3-201ENST00000215829 CEBPZQ03701 1054 aaKnown RBP18.28■□□□□ 0.52
SNRPD3-201ENST00000215829 PPIL2Q13356 520 aa18.28■□□□□ 0.52
SNRPD3-201ENST00000215829 EARS2Q5JPH6 523 aaKnown RBP18.28■□□□□ 0.52
SNRPD3-201ENST00000215829 OPTNQ96CV9 577 aa18.28■□□□□ 0.52
SNRPD3-201ENST00000215829 SLC10A4Q96EP9 437 aa18.28■□□□□ 0.52
SNRPD3-201ENST00000215829 FTOQ9C0B1 505 aaKnown RBP eCLIP18.28■□□□□ 0.52
SNRPD3-201ENST00000215829 RIC8AQ9NPQ8 531 aa18.28■□□□□ 0.52
SNRPD3-201ENST00000215829 POLR3EQ9NVU0 708 aa18.28■□□□□ 0.52
SNRPD3-201ENST00000215829 RCOR1Q9UKL0 485 aa18.28■□□□□ 0.52
SNRPD3-201ENST00000215829 PPP1R9AQ9ULJ8 1098 aa18.28■□□□□ 0.52
SNRPD3-201ENST00000215829 PTPRFP10586 1907 aa18.27■□□□□ 0.52
SNRPD3-201ENST00000215829 TOB1P50616 345 aaPredicted RBP18.27■□□□□ 0.52
SNRPD3-201ENST00000215829 SAMD1Q6SPF0 538 aaPredicted RBP18.27■□□□□ 0.52
SNRPD3-201ENST00000215829 CATSPERGQ6ZRH7 1159 aa18.27■□□□□ 0.52
SNRPD3-201ENST00000215829 C2orf69Q8N8R5 385 aa18.27■□□□□ 0.52
SNRPD3-201ENST00000215829 GLT8D2Q9H1C3 349 aa18.27■□□□□ 0.52
SNRPD3-201ENST00000215829 KCNH4Q9UQ05 1017 aa18.27■□□□□ 0.52
SNRPD3-201ENST00000215829 CLIC4Q9Y696 253 aa18.27■□□□□ 0.52
SNRPD3-201ENST00000215829 A0A0G2JLL6 359 aaPredicted RBP18.27■□□□□ 0.51
SNRPD3-201ENST00000215829 NASPP49321 788 aaPredicted RBP18.27■□□□□ 0.51
SNRPD3-201ENST00000215829 MRPL12P52815 198 aaKnown RBP18.27■□□□□ 0.51
SNRPD3-201ENST00000215829 NOM1Q5C9Z4 860 aaKnown RBP18.27■□□□□ 0.51
SNRPD3-201ENST00000215829 ANO1Q5XXA6 986 aa18.27■□□□□ 0.51
SNRPD3-201ENST00000215829 PIK3AP1Q6ZUJ8 805 aa18.27■□□□□ 0.51
SNRPD3-201ENST00000215829 PRRT2Q7Z6L0 340 aaPredicted RBP18.27■□□□□ 0.51
SNRPD3-201ENST00000215829 PSTPIP2Q9H939 334 aa18.27■□□□□ 0.51
SNRPD3-201ENST00000215829 FAM205CA6NFA0 338 aa18.26■□□□□ 0.51
SNRPD3-201ENST00000215829 USP17L15C9J2P7 530 aa18.26■□□□□ 0.51
SNRPD3-201ENST00000215829 USP17L13C9JLJ4 530 aa18.26■□□□□ 0.51
SNRPD3-201ENST00000215829 USP17L11C9JVI0 530 aa18.26■□□□□ 0.51
SNRPD3-201ENST00000215829 USP17L18D6R9N7 530 aa18.26■□□□□ 0.51
SNRPD3-201ENST00000215829 USP17L22D6RA61 530 aa18.26■□□□□ 0.51
SNRPD3-201ENST00000215829 USP17L17D6RBQ6 530 aa18.26■□□□□ 0.51
SNRPD3-201ENST00000215829 USP17L19D6RCP7 530 aa18.26■□□□□ 0.51
SNRPD3-201ENST00000215829 USP17L20D6RJB6 530 aa18.26■□□□□ 0.51
SNRPD3-201ENST00000215829 YEATS4O95619 227 aa18.26■□□□□ 0.51
SNRPD3-201ENST00000215829 FDX1P10109 184 aa18.26■□□□□ 0.51
SNRPD3-201ENST00000215829 USP17L24Q0WX57 530 aa18.26■□□□□ 0.51
SNRPD3-201ENST00000215829 USH1GQ495M9 461 aa18.26■□□□□ 0.51
SNRPD3-201ENST00000215829 CCDC174Q6PII3 467 aa18.26■□□□□ 0.51
SNRPD3-201ENST00000215829 REXO1Q8N1G1 1221 aaKnown RBP18.26■□□□□ 0.51
SNRPD3-201ENST00000215829 LINC00301Q8NCQ3 95 aa18.26■□□□□ 0.51
SNRPD3-201ENST00000215829 RASGRP4Q8TDF6 673 aa18.26■□□□□ 0.51
SNRPD3-201ENST00000215829 CUL5Q93034 780 aa18.26■□□□□ 0.51
SNRPD3-201ENST00000215829 SLC38A10Q9HBR0 1119 aa18.26■□□□□ 0.51
SNRPD3-201ENST00000215829 GPBP1L1Q9HC44 474 aaPredicted RBP18.26■□□□□ 0.51
SNRPD3-201ENST00000215829 NOL7Q9UMY1 257 aaKnown RBP18.26■□□□□ 0.51
SNRPD3-201ENST00000215829 CCDC194A0A1B0GVG4 234 aa18.25■□□□□ 0.51
SNRPD3-201ENST00000215829 COG2Q14746 738 aa18.25■□□□□ 0.51
SNRPD3-201ENST00000215829 CST9Q5W186 159 aa18.25■□□□□ 0.51
SNRPD3-201ENST00000215829 PROCA1Q8NCQ7 364 aaPredicted RBP18.25■□□□□ 0.51
SNRPD3-201ENST00000215829 PARP14Q460N5 1801 aa18.25■□□□□ 0.51
SNRPD3-201ENST00000215829 ICAM1P05362 532 aa18.25■□□□□ 0.51
SNRPD3-201ENST00000215829 DSG3P32926 999 aa18.25■□□□□ 0.51
SNRPD3-201ENST00000215829 TRAPPC10P48553 1259 aa18.25■□□□□ 0.51
SNRPD3-201ENST00000215829 SF3A1Q15459 793 aaKnown RBP18.25■□□□□ 0.51
SNRPD3-201ENST00000215829 KRT25Q7Z3Z0 450 aa18.25■□□□□ 0.51
SNRPD3-201ENST00000215829 BIN2Q9UBW5 565 aaPredicted RBP18.25■□□□□ 0.51
SNRPD3-201ENST00000215829 ADAMTS5Q9UNA0 930 aa18.25■□□□□ 0.51
SNRPD3-201ENST00000215829 ZNF536O15090 1300 aa18.24■□□□□ 0.51
SNRPD3-201ENST00000215829 RLFQ13129 1914 aa18.24■□□□□ 0.51
SNRPD3-201ENST00000215829 VWA5AO00534 786 aa18.24■□□□□ 0.51
SNRPD3-201ENST00000215829 TRAK2O60296 914 aa18.24■□□□□ 0.51
SNRPD3-201ENST00000215829 ZBED4O75132 1171 aa18.24■□□□□ 0.51
SNRPD3-201ENST00000215829 GADD45BO75293 160 aaPredicted RBP18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms