RNA–Protein interactions for RNA: ENST00000212355.8

TGFBR3-201, Transcript of transforming growth factor beta receptor 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TGFBR3, Length 6,465 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-201ENST00000212355 CLTAP09496 248 aa14.97□□□□□ -0.01
TGFBR3-201ENST00000212355 BTDP43251 543 aa14.97□□□□□ -0.01
TGFBR3-201ENST00000212355 CACNA2D3Q8IZS8 1091 aa14.97□□□□□ -0.01
TGFBR3-201ENST00000212355 FANCBQ8NB91 859 aa14.97□□□□□ -0.01
TGFBR3-201ENST00000212355 PNMA1Q8ND90 353 aa14.97□□□□□ -0.01
TGFBR3-201ENST00000212355 SCYL1Q96KG9 808 aa14.97□□□□□ -0.01
TGFBR3-201ENST00000212355 DNAJC17Q9NVM6 304 aaKnown RBP14.97□□□□□ -0.01
TGFBR3-201ENST00000212355 KLRF2D3W0D1 207 aa14.97□□□□□ -0.01
TGFBR3-201ENST00000212355 CCT5P48643 541 aa14.97□□□□□ -0.01
TGFBR3-201ENST00000212355 CHRNDQ07001 517 aa14.97□□□□□ -0.01
TGFBR3-201ENST00000212355 ZSWIM6Q9HCJ5 1215 aa14.97□□□□□ -0.01
TGFBR3-201ENST00000212355 PPP1R12AO14974 1030 aaPredicted RBP14.97□□□□□ -0.01
TGFBR3-201ENST00000212355 ARID5BQ14865 1188 aa14.97□□□□□ -0.01
TGFBR3-201ENST00000212355 FIS1Q9Y3D6 152 aa14.97□□□□□ -0.01
TGFBR3-201ENST00000212355 ANKRD65E5RJM6 399 aa14.97□□□□□ -0.01
TGFBR3-201ENST00000212355 SEC31BQ9NQW1 1179 aa14.97□□□□□ -0.01
TGFBR3-201ENST00000212355 IBTKQ9P2D0 1353 aaPredicted RBP14.97□□□□□ -0.01
TGFBR3-201ENST00000212355 MYCP01106 439 aaPredicted RBP14.96□□□□□ -0.01
TGFBR3-201ENST00000212355 TMOD1P28289 359 aa14.96□□□□□ -0.01
TGFBR3-201ENST00000212355 MESDQ14696 234 aa14.96□□□□□ -0.01
TGFBR3-201ENST00000212355 GADL1Q6ZQY3 521 aa14.96□□□□□ -0.01
TGFBR3-201ENST00000212355 LSG1Q9H089 658 aaKnown RBP14.96□□□□□ -0.01
TGFBR3-201ENST00000212355 MOCS3O95396 460 aa14.96□□□□□ -0.01
TGFBR3-201ENST00000212355 PEX19P40855 299 aa14.96□□□□□ -0.01
TGFBR3-201ENST00000212355 STK10O94804 968 aaKnown RBP14.96□□□□□ -0.01
TGFBR3-201ENST00000212355 DYNLT1P63172 113 aa14.96□□□□□ -0.01
TGFBR3-201ENST00000212355 THOC1Q96FV9 657 aaKnown RBP14.96□□□□□ -0.01
TGFBR3-201ENST00000212355 SLCO1A2P46721 670 aa14.96□□□□□ -0.02
TGFBR3-201ENST00000212355 SH2D4AQ9H788 454 aa14.96□□□□□ -0.02
TGFBR3-201ENST00000212355 KIAA1024Q9UPX6 916 aa14.96□□□□□ -0.02
TGFBR3-201ENST00000212355 SPDYE16A6NNV3 312 aaPredicted RBP14.96□□□□□ -0.02
TGFBR3-201ENST00000212355 GIGYF1O75420 1035 aaPredicted RBP14.96□□□□□ -0.02
TGFBR3-201ENST00000212355 NR5A1Q13285 461 aa14.96□□□□□ -0.02
TGFBR3-201ENST00000212355 ZKSCAN8Q15776 578 aaPredicted RBP14.96□□□□□ -0.02
TGFBR3-201ENST00000212355 SPDYE2Q495Y8 402 aa14.96□□□□□ -0.02
TGFBR3-201ENST00000212355 EP400NLQ6ZTU2 488 aa14.96□□□□□ -0.02
TGFBR3-201ENST00000212355 NOP9Q86U38 636 aaKnown RBP14.96□□□□□ -0.02
TGFBR3-201ENST00000212355 DEPTORQ8TB45 409 aa14.96□□□□□ -0.02
TGFBR3-201ENST00000212355 POLD4Q9HCU8 107 aa14.96□□□□□ -0.02
TGFBR3-201ENST00000212355 PARP10Q53GL7 1025 aa14.95□□□□□ -0.02
TGFBR3-201ENST00000212355 OR8K1Q8NGG5 319 aa14.95□□□□□ -0.02
TGFBR3-201ENST00000212355 NAP1L4Q99733 375 aaKnown RBP14.95□□□□□ -0.02
TGFBR3-201ENST00000212355 TBK1Q9UHD2 729 aa14.95□□□□□ -0.02
TGFBR3-201ENST00000212355 TPX2Q9ULW0 747 aaKnown RBP14.95□□□□□ -0.02
TGFBR3-201ENST00000212355 ZNF518AQ6AHZ1 1483 aa14.95□□□□□ -0.02
TGFBR3-201ENST00000212355 LIG4P49917 911 aa14.95□□□□□ -0.02
TGFBR3-201ENST00000212355 TSTA3Q13630 321 aaPredicted RBP14.95□□□□□ -0.02
TGFBR3-201ENST00000212355 CCDC117Q8IWD4 279 aaPredicted RBP14.95□□□□□ -0.02
TGFBR3-201ENST00000212355 LMNTD2Q8IXW0 634 aa14.95□□□□□ -0.02
TGFBR3-201ENST00000212355 CNOT6LQ96LI5 555 aaKnown RBP14.95□□□□□ -0.02
TGFBR3-201ENST00000212355 MKRN1Q9UHC7 482 aaKnown RBP14.95□□□□□ -0.02
TGFBR3-201ENST00000212355 EDC4Q6P2E9 1401 aaKnown RBP14.95□□□□□ -0.02
TGFBR3-201ENST00000212355 AOX1Q06278 1338 aa14.95□□□□□ -0.02
TGFBR3-201ENST00000212355 THAP12O43422 761 aa14.95□□□□□ -0.02
TGFBR3-201ENST00000212355 FTCDO95954 541 aa14.95□□□□□ -0.02
TGFBR3-201ENST00000212355 STAT1P42224 750 aa14.95□□□□□ -0.02
TGFBR3-201ENST00000212355 IL1RL1Q01638 556 aa14.95□□□□□ -0.02
TGFBR3-201ENST00000212355 PABPC4Q13310 644 aaKnown RBP eCLIP14.95□□□□□ -0.021e-6■■■■□ 21.6
TGFBR3-201ENST00000212355 ADAM9Q13443 819 aa14.95□□□□□ -0.02
TGFBR3-201ENST00000212355 GDF11O95390 407 aa14.95□□□□□ -0.02
TGFBR3-201ENST00000212355 APBA3O96018 575 aa14.95□□□□□ -0.02
TGFBR3-201ENST00000212355 MUM1Q2TAK8 710 aa14.95□□□□□ -0.02
TGFBR3-201ENST00000212355 RUFY4Q6ZNE9 571 aa14.95□□□□□ -0.02
TGFBR3-201ENST00000212355 SYCE1Q8N0S2 351 aa14.95□□□□□ -0.02
TGFBR3-201ENST00000212355 CAPS2Q9BXY5 557 aa14.95□□□□□ -0.02
TGFBR3-201ENST00000212355 MAD1L1Q9Y6D9 718 aa14.95□□□□□ -0.02
TGFBR3-201ENST00000212355 USH1CQ9Y6N9 552 aa14.95□□□□□ -0.02
TGFBR3-201ENST00000212355 EIF4G3O43432 1585 aaKnown RBP14.95□□□□□ -0.02
TGFBR3-201ENST00000212355 PFKFB2O60825 505 aa14.95□□□□□ -0.02
TGFBR3-201ENST00000212355 CASP2P42575 452 aa14.95□□□□□ -0.02
TGFBR3-201ENST00000212355 MKRN3Q13064 507 aaKnown RBP14.95□□□□□ -0.02
TGFBR3-201ENST00000212355 NME8Q8N427 588 aa14.95□□□□□ -0.02
TGFBR3-201ENST00000212355 FNDC3AQ9Y2H6 1198 aaKnown RBP14.95□□□□□ -0.02
TGFBR3-201ENST00000212355 STAM2O75886 525 aa14.94□□□□□ -0.02
TGFBR3-201ENST00000212355 CNGA1P29973 690 aa14.94□□□□□ -0.02
TGFBR3-201ENST00000212355 IVNS1ABPQ9Y6Y0 642 aa14.94□□□□□ -0.02
TGFBR3-201ENST00000212355 SEC23IPQ9Y6Y8 1000 aaKnown RBP14.94□□□□□ -0.02
TGFBR3-201ENST00000212355 CASP1P29466 404 aa14.94□□□□□ -0.02
TGFBR3-201ENST00000212355 BCAS4Q8TDM0 211 aa14.94□□□□□ -0.02
TGFBR3-201ENST00000212355 MLXIPQ9HAP2 919 aa14.94□□□□□ -0.02
TGFBR3-201ENST00000212355 ABCC4O15439 1325 aa14.94□□□□□ -0.02
TGFBR3-201ENST00000212355 RFC1P35251 1148 aaPredicted RBP14.94□□□□□ -0.02
TGFBR3-201ENST00000212355 TCIRG1Q13488 830 aa14.94□□□□□ -0.02
TGFBR3-201ENST00000212355 NUF2Q9BZD4 464 aa14.94□□□□□ -0.02
TGFBR3-201ENST00000212355 RAB20Q9NX57 234 aa14.94□□□□□ -0.02
TGFBR3-201ENST00000212355 DLGAP5Q15398 846 aa14.94□□□□□ -0.02
TGFBR3-201ENST00000212355 OTUD6AQ7L8S5 288 aa14.94□□□□□ -0.02
TGFBR3-201ENST00000212355 NLRX1Q86UT6 975 aa14.94□□□□□ -0.02
TGFBR3-201ENST00000212355 RNF10Q8N5U6 811 aaKnown RBP14.94□□□□□ -0.02
TGFBR3-201ENST00000212355 GDAP1Q8TB36 358 aa14.94□□□□□ -0.02
TGFBR3-201ENST00000212355 SPTLC3Q9NUV7 552 aa14.94□□□□□ -0.02
TGFBR3-201ENST00000212355 ASAP1Q9ULH1 1129 aa14.94□□□□□ -0.02
TGFBR3-201ENST00000212355 LRRIQ4A6NIV6 560 aa14.94□□□□□ -0.02
TGFBR3-201ENST00000212355 OPHN1O60890 802 aa14.94□□□□□ -0.02
TGFBR3-201ENST00000212355 PIK3CAP42336 1068 aa14.94□□□□□ -0.02
TGFBR3-201ENST00000212355 SEPT6Q14141 434 aa14.94□□□□□ -0.02
TGFBR3-201ENST00000212355 RCN2Q14257 317 aa14.94□□□□□ -0.02
TGFBR3-201ENST00000212355 SMCR8Q8TEV9 937 aaPredicted RBP14.94□□□□□ -0.02
TGFBR3-201ENST00000212355 COA7Q96BR5 231 aa14.94□□□□□ -0.02
TGFBR3-201ENST00000212355 DDX27Q96GQ7 796 aaKnown RBP14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms