RNA–Protein interactions for RNA: ENST00000172853.14

NEB-201, Transcript of nebulin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NEB, Length 20,634 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEB-201ENST00000172853 TRIM54Q9BYV2 358 aa3.76□□□□□ -1.81
NEB-201ENST00000172853 BACH2Q9BYV9 841 aa3.76□□□□□ -1.81
NEB-201ENST00000172853 CTAGE15A4D2H0 777 aa3.76□□□□□ -1.81
NEB-201ENST00000172853 SLC1A4P43007 532 aa3.76□□□□□ -1.81
NEB-201ENST00000172853 AFMP43652 599 aa3.76□□□□□ -1.81
NEB-201ENST00000172853 C1orf115Q9H7X2 142 aa3.76□□□□□ -1.81
NEB-201ENST00000172853 LAMC3Q9Y6N6 1575 aa3.76□□□□□ -1.81
NEB-201ENST00000172853 K7ELQ4 463 aaPredicted RBP3.76□□□□□ -1.81
NEB-201ENST00000172853 GUCA1CO95843 209 aa3.76□□□□□ -1.81
NEB-201ENST00000172853 HIBADHP31937 336 aaKnown RBP3.76□□□□□ -1.81
NEB-201ENST00000172853 CCT2P78371 535 aaKnown RBP3.76□□□□□ -1.81
NEB-201ENST00000172853 SLC26A7Q8TE54 656 aa3.76□□□□□ -1.81
NEB-201ENST00000172853 TADA1Q96BN2 335 aa3.76□□□□□ -1.81
NEB-201ENST00000172853 POLR3CQ9BUI4 534 aaPredicted RBP3.76□□□□□ -1.81
NEB-201ENST00000172853 PPP6R3Q5H9R7 873 aaPredicted RBP3.76□□□□□ -1.81
NEB-201ENST00000172853 SYCE1Q8N0S2 351 aa3.76□□□□□ -1.81
NEB-201ENST00000172853 NFATC2IPQ8NCF5 419 aa3.76□□□□□ -1.81
NEB-201ENST00000172853 CACNA2D2Q9NY47 1150 aa3.76□□□□□ -1.81
NEB-201ENST00000172853 TLDC2A0PJX2 215 aa3.76□□□□□ -1.81
NEB-201ENST00000172853 CHEK2O96017 543 aa3.76□□□□□ -1.81
NEB-201ENST00000172853 LUZP2Q86TE4 346 aa3.76□□□□□ -1.81
NEB-201ENST00000172853 RNF168Q8IYW5 571 aaPredicted RBP3.76□□□□□ -1.81
NEB-201ENST00000172853 APOL6Q9BWW8 343 aa3.76□□□□□ -1.81
NEB-201ENST00000172853 SYNDIG1LA6NDD5 238 aa3.76□□□□□ -1.81
NEB-201ENST00000172853 GRIN3BO60391 1043 aa3.76□□□□□ -1.81
NEB-201ENST00000172853 PDCLQ13371 301 aa3.76□□□□□ -1.81
NEB-201ENST00000172853 FAM180AQ6UWF9 173 aa3.76□□□□□ -1.81
NEB-201ENST00000172853 MICU3Q86XE3 530 aa3.76□□□□□ -1.81
NEB-201ENST00000172853 CCHCR1Q8TD31 782 aa3.76□□□□□ -1.81
NEB-201ENST00000172853 MCUR1Q96AQ8 359 aa3.76□□□□□ -1.81
NEB-201ENST00000172853 LZTS2Q9BRK4 669 aa3.76□□□□□ -1.81
NEB-201ENST00000172853 INO80BQ9C086 356 aaPredicted RBP3.76□□□□□ -1.81
NEB-201ENST00000172853 RASSF4Q9H2L5 321 aa3.76□□□□□ -1.81
NEB-201ENST00000172853 KBTBD13C9JR72 458 aa3.76□□□□□ -1.81
NEB-201ENST00000172853 SYKP43405 635 aa3.76□□□□□ -1.81
NEB-201ENST00000172853 BSPRYQ5W0U4 402 aa3.76□□□□□ -1.81
NEB-201ENST00000172853 NCAPH2Q6IBW4 605 aa3.76□□□□□ -1.81
NEB-201ENST00000172853 PRPF40BQ6NWY9 871 aaKnown RBP3.76□□□□□ -1.81
NEB-201ENST00000172853 SMC5Q8IY18 1101 aa3.76□□□□□ -1.81
NEB-201ENST00000172853 RPRD2Q5VT52 1461 aaKnown RBP3.76□□□□□ -1.81
NEB-201ENST00000172853 DDX39AO00148 427 aaKnown RBP3.76□□□□□ -1.81
NEB-201ENST00000172853 TTI1O43156 1089 aa3.76□□□□□ -1.81
NEB-201ENST00000172853 NBPF20Q3BBV1 942 aa3.76□□□□□ -1.81
NEB-201ENST00000172853 GLE1Q53GS7 698 aaKnown RBP3.76□□□□□ -1.81
NEB-201ENST00000172853 NBPF10Q6P3W6 841 aaKnown RBP3.76□□□□□ -1.81
NEB-201ENST00000172853 PSDA5PKW4 1024 aaPredicted RBP3.76□□□□□ -1.81
NEB-201ENST00000172853 H7C1W4 665 aa3.76□□□□□ -1.81
NEB-201ENST00000172853 IGBP1P78318 339 aa3.76□□□□□ -1.81
NEB-201ENST00000172853 NR5A1Q13285 461 aa3.76□□□□□ -1.81
NEB-201ENST00000172853 GIPC2Q8TF65 315 aa3.76□□□□□ -1.81
NEB-201ENST00000172853 GRK7Q8WTQ7 553 aa3.76□□□□□ -1.81
NEB-201ENST00000172853 ALG1Q9BT22 464 aa3.76□□□□□ -1.81
NEB-201ENST00000172853 CARD9Q9H257 536 aa3.76□□□□□ -1.81
NEB-201ENST00000172853 RPF1Q9H9Y2 349 aaKnown RBP3.76□□□□□ -1.81
NEB-201ENST00000172853 CALCOCO1Q9P1Z2 691 aa3.76□□□□□ -1.81
NEB-201ENST00000172853 DNM3Q9UQ16 869 aa3.76□□□□□ -1.81
NEB-201ENST00000172853 IKBKBO14920 756 aa3.76□□□□□ -1.81
NEB-201ENST00000172853 PPP6R2O75170 966 aa3.76□□□□□ -1.81
NEB-201ENST00000172853 DEUP1Q05D60 604 aa3.76□□□□□ -1.81
NEB-201ENST00000172853 RSBN1LQ6PCB5 846 aaPredicted RBP3.76□□□□□ -1.81
NEB-201ENST00000172853 DDX56Q9NY93 547 aaKnown RBP3.76□□□□□ -1.81
NEB-201ENST00000172853 CFAP43Q8NDM7 1665 aa3.76□□□□□ -1.81
NEB-201ENST00000172853 LOC102724159A0A0B4J2E5 919 aa3.76□□□□□ -1.81
NEB-201ENST00000172853 HSPA1AP0DMV8 641 aaKnown RBP3.76□□□□□ -1.81
NEB-201ENST00000172853 HSPA1BP0DMV9 641 aaKnown RBP3.76□□□□□ -1.81
NEB-201ENST00000172853 PTPAQ15257 358 aa3.76□□□□□ -1.81
NEB-201ENST00000172853 PWP2Q15269 919 aaKnown RBP3.76□□□□□ -1.81
NEB-201ENST00000172853 ASIC2Q16515 512 aa3.76□□□□□ -1.81
NEB-201ENST00000172853 ANGPTL8Q6UXH0 198 aa3.76□□□□□ -1.81
NEB-201ENST00000172853 ZMAT2Q96NC0 199 aaKnown RBP3.76□□□□□ -1.81
NEB-201ENST00000172853 GBP5Q96PP8 586 aa3.76□□□□□ -1.81
NEB-201ENST00000172853 GRIN2BQ13224 1484 aa3.76□□□□□ -1.81
NEB-201ENST00000172853 STAM2O75886 525 aa3.76□□□□□ -1.81
NEB-201ENST00000172853 CES1P23141 567 aa3.76□□□□□ -1.81
NEB-201ENST00000172853 BRD2P25440 801 aaKnown RBP3.76□□□□□ -1.81
NEB-201ENST00000172853 YY1P25490 414 aa3.76□□□□□ -1.81
NEB-201ENST00000172853 ANKRD20A4Q4UJ75 823 aa3.76□□□□□ -1.81
NEB-201ENST00000172853 ANKRD20A8PQ5CZ79 823 aa3.76□□□□□ -1.81
NEB-201ENST00000172853 ANKRD20A2Q5SQ80 823 aa3.76□□□□□ -1.81
NEB-201ENST00000172853 ANKRD20A1Q5TYW2 823 aa3.76□□□□□ -1.81
NEB-201ENST00000172853 TTC19Q6DKK2 380 aaPredicted RBP3.76□□□□□ -1.81
NEB-201ENST00000172853 CDC26Q8NHZ8 85 aa3.76□□□□□ -1.81
NEB-201ENST00000172853 MYL1P05976 194 aa3.76□□□□□ -1.81
NEB-201ENST00000172853 PDE1CQ14123 709 aaPredicted RBP3.76□□□□□ -1.81
NEB-201ENST00000172853 KIAA1755Q5JYT7 1200 aa3.76□□□□□ -1.81
NEB-201ENST00000172853 CCDC183Q5T5S1 534 aa3.76□□□□□ -1.81
NEB-201ENST00000172853 KRBA2Q6ZNG9 492 aa3.76□□□□□ -1.81
NEB-201ENST00000172853 NUDCD1Q96RS6 583 aa3.76□□□□□ -1.81
NEB-201ENST00000172853 TRPV6Q9H1D0 765 aa3.76□□□□□ -1.81
NEB-201ENST00000172853 ZBTB12Q9Y330 459 aaPredicted RBP3.76□□□□□ -1.81
NEB-201ENST00000172853 BIN1O00499 593 aa3.76□□□□□ -1.81
NEB-201ENST00000172853 NR1H3Q13133 447 aa3.76□□□□□ -1.81
NEB-201ENST00000172853 ANKRD20A3Q5VUR7 823 aa3.76□□□□□ -1.81
NEB-201ENST00000172853 MTBPQ96DY7 904 aa3.76□□□□□ -1.81
NEB-201ENST00000172853 EHD2Q9NZN4 543 aa3.76□□□□□ -1.81
NEB-201ENST00000172853 IPPQ9Y573 584 aa3.76□□□□□ -1.81
NEB-201ENST00000172853 ARHGAP10A1A4S6 786 aa3.75□□□□□ -1.81
NEB-201ENST00000172853 GOLGA8JA6NMD2 632 aa3.75□□□□□ -1.81
NEB-201ENST00000172853 ARIH2O95376 493 aa3.75□□□□□ -1.81
NEB-201ENST00000172853 ESRP1Q6NXG1 681 aaKnown RBP3.75□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms