RNA–Protein interactions for RNA: ENSMUST00000215817.1

Upf1-202, Transcript of Regulator of nonsense transcripts 1, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Upf1, Length 4,518 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upf1-202ENSMUST00000215817 Smtnl1Q99LM3 459 aa17.14■□□□□ 0.33
Upf1-202ENSMUST00000215817 Pfkfb1P70266 471 aa17.14■□□□□ 0.33
Upf1-202ENSMUST00000215817 Abhd15Q5F2F2 459 aa17.14■□□□□ 0.33
Upf1-202ENSMUST00000215817 Ahcyl2Q68FL4 613 aaKnown RBP17.14■□□□□ 0.33
Upf1-202ENSMUST00000215817 Lrrc45Q8CIM1 670 aa17.14■□□□□ 0.33
Upf1-202ENSMUST00000215817 Rnaseh1O70338 285 aa17.13■□□□□ 0.33
Upf1-202ENSMUST00000215817 Nf2P46662 596 aa17.13■□□□□ 0.33
Upf1-202ENSMUST00000215817 Tnni3P48787 211 aa17.13■□□□□ 0.33
Upf1-202ENSMUST00000215817 Nsrp1Q5NCR9 542 aa17.13■□□□□ 0.33
Upf1-202ENSMUST00000215817 Pdcl2Q78Y63 240 aa17.13■□□□□ 0.33
Upf1-202ENSMUST00000215817 Nacc1Q7TSZ8 514 aa17.13■□□□□ 0.33
Upf1-202ENSMUST00000215817 Sass6Q80UK7 654 aa17.13■□□□□ 0.33
Upf1-202ENSMUST00000215817 Fbxo28Q8BIG4 368 aa17.13■□□□□ 0.33
Upf1-202ENSMUST00000215817 GlyctkQ8QZY2 523 aa17.13■□□□□ 0.33
Upf1-202ENSMUST00000215817 Slc51aQ8R000 340 aa17.13■□□□□ 0.33
Upf1-202ENSMUST00000215817 Med10Q9CXU0 135 aa17.13■□□□□ 0.33
Upf1-202ENSMUST00000215817 Twf2Q9Z0P5 349 aaKnown RBP17.13■□□□□ 0.33
Upf1-202ENSMUST00000215817 Atp2b1G5E829 1220 aa17.13■□□□□ 0.33
Upf1-202ENSMUST00000215817 Trap1aP19473 224 aa17.13■□□□□ 0.33
Upf1-202ENSMUST00000215817 Kdm1aQ6ZQ88 853 aa17.13■□□□□ 0.33
Upf1-202ENSMUST00000215817 Gbp7Q91Z40 638 aa17.13■□□□□ 0.33
Upf1-202ENSMUST00000215817 Plcg1Q62077 1302 aa17.13■□□□□ 0.33
Upf1-202ENSMUST00000215817 Elp3Q9CZX0 547 aa17.13■□□□□ 0.33
Upf1-202ENSMUST00000215817 Mad2l2Q9D752 211 aa17.13■□□□□ 0.33
Upf1-202ENSMUST00000215817 Plcb1Q9Z1B3 1216 aa17.13■□□□□ 0.33
Upf1-202ENSMUST00000215817 Gm11985A0A1B0GS61 206 aa17.13■□□□□ 0.33
Upf1-202ENSMUST00000215817 Bach1P97302 739 aa17.13■□□□□ 0.33
Upf1-202ENSMUST00000215817 Nfx1B1AY10 1114 aaKnown RBP17.12■□□□□ 0.33
Upf1-202ENSMUST00000215817 Bace1P56818 501 aa17.12■□□□□ 0.33
Upf1-202ENSMUST00000215817 Map3k9Q3U1V8 1077 aa17.12■□□□□ 0.33
Upf1-202ENSMUST00000215817 CtcfQ61164 736 aaKnown RBP17.12■□□□□ 0.33
Upf1-202ENSMUST00000215817 Styxl1Q9DAR2 321 aa17.12■□□□□ 0.33
Upf1-202ENSMUST00000215817 Chaf1aQ9QWF0 911 aa17.12■□□□□ 0.33
Upf1-202ENSMUST00000215817 Shank2Q80Z38 1476 aa17.12■□□□□ 0.33
Upf1-202ENSMUST00000215817 Gimd1E9PW74 217 aa17.12■□□□□ 0.33
Upf1-202ENSMUST00000215817 Gjc1P28229 396 aa17.12■□□□□ 0.33
Upf1-202ENSMUST00000215817 Stat3P42227 770 aaKnown RBP17.12■□□□□ 0.33
Upf1-202ENSMUST00000215817 Adcy5P84309 1262 aa17.12■□□□□ 0.33
Upf1-202ENSMUST00000215817 Fam114a1Q9D281 569 aa17.12■□□□□ 0.33
Upf1-202ENSMUST00000215817 Fem1bQ9Z2G0 627 aa17.12■□□□□ 0.33
Upf1-202ENSMUST00000215817 Pcdha4O88689 947 aa17.12■□□□□ 0.33
Upf1-202ENSMUST00000215817 Igbp1Q61249 340 aa17.12■□□□□ 0.33
Upf1-202ENSMUST00000215817 Myl7Q9QVP4 175 aa17.12■□□□□ 0.33
Upf1-202ENSMUST00000215817 Btn2a2A4QPC6 514 aa17.11■□□□□ 0.33
Upf1-202ENSMUST00000215817 Epb41l2O70318 988 aaKnown RBP17.11■□□□□ 0.33
Upf1-202ENSMUST00000215817 Axin2O88566 840 aa17.11■□□□□ 0.33
Upf1-202ENSMUST00000215817 CfhP06909 1234 aa17.11■□□□□ 0.33
Upf1-202ENSMUST00000215817 Akap4Q60662 849 aa17.11■□□□□ 0.33
Upf1-202ENSMUST00000215817 Ift88Q61371 824 aa17.11■□□□□ 0.33
Upf1-202ENSMUST00000215817 Tor1aip2Q8BYU6 502 aa17.11■□□□□ 0.33
Upf1-202ENSMUST00000215817 Ubxn8Q9QZ49 277 aa17.11■□□□□ 0.33
Upf1-202ENSMUST00000215817 Pfkfb3A7UAK5 555 aa17.11■□□□□ 0.33
Upf1-202ENSMUST00000215817 Aknad1E9Q8N6 675 aa17.11■□□□□ 0.33
Upf1-202ENSMUST00000215817 Meis1Q60954 390 aa17.11■□□□□ 0.33
Upf1-202ENSMUST00000215817 Csrnp2Q8BGQ2 534 aa17.11■□□□□ 0.33
Upf1-202ENSMUST00000215817 Klhl30Q8C3F7 581 aa17.11■□□□□ 0.33
Upf1-202ENSMUST00000215817 Serpinb3bQ9D1Q5 387 aa17.11■□□□□ 0.33
Upf1-202ENSMUST00000215817 Kmt5aQ2YDW7 349 aa17.11■□□□□ 0.33
Upf1-202ENSMUST00000215817 Gm11437Q5QR91 290 aa17.11■□□□□ 0.33
Upf1-202ENSMUST00000215817 Slc9a1Q61165 820 aa17.11■□□□□ 0.33
Upf1-202ENSMUST00000215817 Mknk2Q8CDB0 459 aa17.11■□□□□ 0.33
Upf1-202ENSMUST00000215817 Pde5aQ8CG03 865 aa17.11■□□□□ 0.33
Upf1-202ENSMUST00000215817 Chd1lQ9CXF7 900 aa17.11■□□□□ 0.33
Upf1-202ENSMUST00000215817 Mmel1Q9JLI3 765 aa17.11■□□□□ 0.33
Upf1-202ENSMUST00000215817 Bend4P86174 541 aa17.11■□□□□ 0.33
Upf1-202ENSMUST00000215817 Zfp317Q8C0Q5 607 aa17.11■□□□□ 0.33
Upf1-202ENSMUST00000215817 Coa7Q921H9 231 aa17.11■□□□□ 0.33
Upf1-202ENSMUST00000215817 Gps2Q921N8 327 aa17.11■□□□□ 0.33
Upf1-202ENSMUST00000215817 Mrpl11Q9CQF0 192 aaKnown RBP17.11■□□□□ 0.33
Upf1-202ENSMUST00000215817 Slc39a2G3X943 309 aa17.1■□□□□ 0.33
Upf1-202ENSMUST00000215817 Dcaf17Q3TUL7 519 aa17.1■□□□□ 0.33
Upf1-202ENSMUST00000215817 Dpp9Q8BVG4 862 aa17.1■□□□□ 0.33
Upf1-202ENSMUST00000215817 Cmtm5Q9D6G9 156 aa17.1■□□□□ 0.33
Upf1-202ENSMUST00000215817 Klrg2Q3UM83 387 aa17.1■□□□□ 0.33
Upf1-202ENSMUST00000215817 Peg10Q7TN75 958 aaKnown RBP17.1■□□□□ 0.33
Upf1-202ENSMUST00000215817 Zhx2Q8C0C0 836 aaKnown RBP17.1■□□□□ 0.33
Upf1-202ENSMUST00000215817 IrgqQ8VIM9 583 aa17.1■□□□□ 0.33
Upf1-202ENSMUST00000215817 Gm7356A0A087WSA6 508 aa17.1■□□□□ 0.33
Upf1-202ENSMUST00000215817 Trappc10Q3TLI0 1259 aa17.1■□□□□ 0.33
Upf1-202ENSMUST00000215817 Il31raQ8K5B1 716 aa17.1■□□□□ 0.33
Upf1-202ENSMUST00000215817 Acot11Q8VHQ9 594 aa17.1■□□□□ 0.33
Upf1-202ENSMUST00000215817 Kif17Q99PW8 1038 aa17.09■□□□□ 0.33
Upf1-202ENSMUST00000215817 Galnt15Q9D2N8 638 aa17.09■□□□□ 0.33
Upf1-202ENSMUST00000215817 Phldb3E9QAF4 648 aa17.09■□□□□ 0.33
Upf1-202ENSMUST00000215817 Rfpl4bJ3QPR6 266 aa17.09■□□□□ 0.33
Upf1-202ENSMUST00000215817 Prom2Q3UUY6 835 aa17.09■□□□□ 0.33
Upf1-202ENSMUST00000215817 Trak2Q6P9N8 913 aa17.09■□□□□ 0.33
Upf1-202ENSMUST00000215817 Acat1Q8QZT1 424 aa17.09■□□□□ 0.33
Upf1-202ENSMUST00000215817 Ppil2Q9D787 521 aa17.09■□□□□ 0.33
Upf1-202ENSMUST00000215817 Myo19Q5SV80 963 aa17.09■□□□□ 0.33
Upf1-202ENSMUST00000215817 Nop2Q922K7 793 aaKnown RBP17.09■□□□□ 0.33
Upf1-202ENSMUST00000215817 Krt34Q9D646 392 aa17.09■□□□□ 0.33
Upf1-202ENSMUST00000215817 Ccdc94Q9D6J3 314 aa17.09■□□□□ 0.33
Upf1-202ENSMUST00000215817 Idh1O88844 414 aaKnown RBP17.09■□□□□ 0.33
Upf1-202ENSMUST00000215817 Atoh1P48985 351 aa17.09■□□□□ 0.33
Upf1-202ENSMUST00000215817 Otud6bQ8K2H2 294 aa17.09■□□□□ 0.33
Upf1-202ENSMUST00000215817 Cacnb1Q8R3Z5 597 aa17.09■□□□□ 0.33
Upf1-202ENSMUST00000215817 Cep128Q8BI22 1102 aa17.08■□□□□ 0.33
Upf1-202ENSMUST00000215817 Rufy1Q8BIJ7 712 aa17.08■□□□□ 0.33
Upf1-202ENSMUST00000215817 Luc7lQ9CYI4 371 aaKnown RBP17.08■□□□□ 0.33
Retrieved 100 of 22,080 RNA–protein pairs in 14.1 ms