RNA–Protein interactions for RNA: ENSMUST00000201549.3

Scn8a-213, Transcript of Sodium channel protein type 8 subunit alpha, mousemouse

APPRIS P5 TSL 5 BASIC

Gene Scn8a, Length 7,120 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8a-213ENSMUST00000201549 D130040H23RikQ8BII3 405 aa10.12□□□□□ -0.79
Scn8a-213ENSMUST00000201549 Fam228aQ8CDW1 299 aa10.12□□□□□ -0.79
Scn8a-213ENSMUST00000201549 Trim32Q8CH72 655 aa10.12□□□□□ -0.79
Scn8a-213ENSMUST00000201549 4930519G04RikQ9CPT7 205 aa10.12□□□□□ -0.79
Scn8a-213ENSMUST00000201549 Tcp11Q01755 566 aa10.12□□□□□ -0.79
Scn8a-213ENSMUST00000201549 Ube2oQ6ZPJ3 1288 aa10.12□□□□□ -0.79
Scn8a-213ENSMUST00000201549 Nacc1Q7TSZ8 514 aa10.12□□□□□ -0.79
Scn8a-213ENSMUST00000201549 Yars2Q8BYL4 472 aaKnown RBP10.12□□□□□ -0.79
Scn8a-213ENSMUST00000201549 Ciao1Q99KN2 339 aa10.12□□□□□ -0.79
Scn8a-213ENSMUST00000201549 Sh3tc1G3X9F6 1346 aa10.12□□□□□ -0.79
Scn8a-213ENSMUST00000201549 Aox4Q3TYQ9 1336 aa10.12□□□□□ -0.79
Scn8a-213ENSMUST00000201549 Ccdc24E9PUW8 296 aa10.12□□□□□ -0.79
Scn8a-213ENSMUST00000201549 GfapP03995 430 aa10.12□□□□□ -0.79
Scn8a-213ENSMUST00000201549 Ripor2Q80U16 1078 aa10.12□□□□□ -0.79
Scn8a-213ENSMUST00000201549 Tcp11l2Q8K1H7 517 aa10.12□□□□□ -0.79
Scn8a-213ENSMUST00000201549 Krt71Q9R0H5 524 aa10.12□□□□□ -0.79
Scn8a-213ENSMUST00000201549 Gm38392E9Q2A2 434 aa10.12□□□□□ -0.79
Scn8a-213ENSMUST00000201549 Map3k12Q60700 888 aa10.12□□□□□ -0.79
Scn8a-213ENSMUST00000201549 Ints8Q80V86 995 aa10.12□□□□□ -0.79
Scn8a-213ENSMUST00000201549 Lin9Q8C735 542 aa10.12□□□□□ -0.79
Scn8a-213ENSMUST00000201549 Scyl2Q8CFE4 930 aa10.12□□□□□ -0.79
Scn8a-213ENSMUST00000201549 Spc24Q9D083 201 aa10.12□□□□□ -0.79
Scn8a-213ENSMUST00000201549 Plcb1Q9Z1B3 1216 aa10.12□□□□□ -0.79
Scn8a-213ENSMUST00000201549 Stk39Q9Z1W9 556 aa10.12□□□□□ -0.79
Scn8a-213ENSMUST00000201549 AdkP55264 361 aa10.12□□□□□ -0.79
Scn8a-213ENSMUST00000201549 Rnf40Q3U319 1001 aa10.12□□□□□ -0.79
Scn8a-213ENSMUST00000201549 Armcx3Q8BHS6 379 aa10.12□□□□□ -0.79
Scn8a-213ENSMUST00000201549 Kcnq3Q8K3F6 873 aa10.12□□□□□ -0.79
Scn8a-213ENSMUST00000201549 Mroh6V9GX81 722 aa10.12□□□□□ -0.79
Scn8a-213ENSMUST00000201549 Sos2Q02384 1333 aa10.11□□□□□ -0.79
Scn8a-213ENSMUST00000201549 Ino80Q6ZPV2 1559 aa10.11□□□□□ -0.79
Scn8a-213ENSMUST00000201549 Bpifb4A2BGH0 617 aa10.11□□□□□ -0.79
Scn8a-213ENSMUST00000201549 Dnaaf1Q9D2H9 634 aa10.11□□□□□ -0.79
Scn8a-213ENSMUST00000201549 Prr29B1ARI9 187 aa10.11□□□□□ -0.79
Scn8a-213ENSMUST00000201549 Zfp174B9EJW5 407 aa10.11□□□□□ -0.79
Scn8a-213ENSMUST00000201549 ZfaP23607 742 aa10.11□□□□□ -0.79
Scn8a-213ENSMUST00000201549 Irx2P81066 474 aa10.11□□□□□ -0.79
Scn8a-213ENSMUST00000201549 Znf365Q8BG89 408 aa10.11□□□□□ -0.79
Scn8a-213ENSMUST00000201549 Maged2Q9ER67 616 aa10.11□□□□□ -0.79
Scn8a-213ENSMUST00000201549 Hic2Q9JLZ6 619 aaKnown RBP10.11□□□□□ -0.79
Scn8a-213ENSMUST00000201549 Eya3P97480 510 aa10.11□□□□□ -0.79
Scn8a-213ENSMUST00000201549 NeblQ0II04 452 aa10.11□□□□□ -0.79
Scn8a-213ENSMUST00000201549 RgmbQ7TQ33 436 aa10.11□□□□□ -0.79
Scn8a-213ENSMUST00000201549 GopcQ8BH60 463 aa10.11□□□□□ -0.79
Scn8a-213ENSMUST00000201549 Vps52Q8C754 723 aaKnown RBP10.11□□□□□ -0.79
Scn8a-213ENSMUST00000201549 Sept8Q8CHH9 429 aa10.11□□□□□ -0.79
Scn8a-213ENSMUST00000201549 Chd1P40201 1711 aa10.11□□□□□ -0.79
Scn8a-213ENSMUST00000201549 Rreb1Q3UH06 1700 aaKnown RBP10.11□□□□□ -0.79
Scn8a-213ENSMUST00000201549 Copb2O55029 905 aa10.11□□□□□ -0.79
Scn8a-213ENSMUST00000201549 Sox5P35710 763 aa10.11□□□□□ -0.79
Scn8a-213ENSMUST00000201549 Gbp8Q2V6D6 525 aa10.11□□□□□ -0.79
Scn8a-213ENSMUST00000201549 Ccdc189Q6NZQ0 333 aa10.11□□□□□ -0.79
Scn8a-213ENSMUST00000201549 Dcaf5Q80T85 946 aa10.11□□□□□ -0.79
Scn8a-213ENSMUST00000201549 Bola2Q8BGS2 86 aa10.11□□□□□ -0.79
Scn8a-213ENSMUST00000201549 Snapc4Q8BP86 1333 aa10.11□□□□□ -0.79
Scn8a-213ENSMUST00000201549 MafgO54790 162 aa10.11□□□□□ -0.79
Scn8a-213ENSMUST00000201549 Ncf2O70145 525 aa10.11□□□□□ -0.79
Scn8a-213ENSMUST00000201549 Mdh1P14152 334 aa10.11□□□□□ -0.79
Scn8a-213ENSMUST00000201549 PrphP15331 475 aa10.11□□□□□ -0.79
Scn8a-213ENSMUST00000201549 HarsQ61035 509 aa10.11□□□□□ -0.79
Scn8a-213ENSMUST00000201549 Rasgrp4Q8BTM9 673 aa10.11□□□□□ -0.79
Scn8a-213ENSMUST00000201549 Q8CEZ4 452 aa10.11□□□□□ -0.79
Scn8a-213ENSMUST00000201549 Pnma3Q8JZW8 466 aa10.11□□□□□ -0.79
Scn8a-213ENSMUST00000201549 IcoslgQ9JHJ8 322 aa10.11□□□□□ -0.79
Scn8a-213ENSMUST00000201549 FliiQ9JJ28 1271 aa10.11□□□□□ -0.79
Scn8a-213ENSMUST00000201549 Ccne2Q9Z238 404 aa10.11□□□□□ -0.79
Scn8a-213ENSMUST00000201549 Trpm1Q2TV84 1622 aa10.11□□□□□ -0.79
Scn8a-213ENSMUST00000201549 Gm15262A0A140LIQ5 728 aa10.11□□□□□ -0.79
Scn8a-213ENSMUST00000201549 Gpr161B2RPY5 545 aa10.11□□□□□ -0.79
Scn8a-213ENSMUST00000201549 Usp53P15975 1069 aa10.11□□□□□ -0.79
Scn8a-213ENSMUST00000201549 Xrcc6P23475 608 aa10.11□□□□□ -0.79
Scn8a-213ENSMUST00000201549 Ctnna1P26231 906 aaKnown RBP10.11□□□□□ -0.79
Scn8a-213ENSMUST00000201549 Fxr1Q61584 677 aaKnown RBP10.11□□□□□ -0.79
Scn8a-213ENSMUST00000201549 Ints4Q8CIM8 964 aa10.11□□□□□ -0.79
Scn8a-213ENSMUST00000201549 Trim68Q8K243 485 aa10.11□□□□□ -0.79
Scn8a-213ENSMUST00000201549 Tbx22Q8K402 517 aa10.11□□□□□ -0.79
Scn8a-213ENSMUST00000201549 Lrrc59Q922Q8 307 aaKnown RBP10.11□□□□□ -0.79
Scn8a-213ENSMUST00000201549 Azi2Q9QYP6 405 aa10.11□□□□□ -0.79
Scn8a-213ENSMUST00000201549 Vstm4T1NXB5 319 aa10.11□□□□□ -0.79
Scn8a-213ENSMUST00000201549 NhsB1AV60 1647 aa10.1□□□□□ -0.79
Scn8a-213ENSMUST00000201549 Stk10O55098 966 aa10.1□□□□□ -0.79
Scn8a-213ENSMUST00000201549 Ercc5P35689 1170 aa10.1□□□□□ -0.79
Scn8a-213ENSMUST00000201549 Tbc1d9bQ5SVR0 1263 aa10.1□□□□□ -0.79
Scn8a-213ENSMUST00000201549 Fkbp3Q62446 224 aaKnown RBP10.1□□□□□ -0.79
Scn8a-213ENSMUST00000201549 Cog4Q8R1U1 785 aa10.1□□□□□ -0.79
Scn8a-213ENSMUST00000201549 Prc1Q99K43 603 aaKnown RBP10.1□□□□□ -0.79
Scn8a-213ENSMUST00000201549 AW822073A0A0N4SUK1 652 aa10.1□□□□□ -0.79
Scn8a-213ENSMUST00000201549 Dnm2P39054 870 aaKnown RBP10.1□□□□□ -0.79
Scn8a-213ENSMUST00000201549 Trappc10Q3TLI0 1259 aa10.1□□□□□ -0.79
Scn8a-213ENSMUST00000201549 Large2Q5XPT3 690 aa10.1□□□□□ -0.79
Scn8a-213ENSMUST00000201549 Naa35Q6PHQ8 725 aa10.1□□□□□ -0.79
Scn8a-213ENSMUST00000201549 Cdk12Q14AX6 1484 aaKnown RBP10.1□□□□□ -0.79
Scn8a-213ENSMUST00000201549 Vmn2r23E9PXI5 849 aa10.1□□□□□ -0.79
Scn8a-213ENSMUST00000201549 Sec24cG3X972 1096 aaKnown RBP10.1□□□□□ -0.79
Scn8a-213ENSMUST00000201549 Gm4340L7N2C4 268 aa10.1□□□□□ -0.79
Scn8a-213ENSMUST00000201549 Cd3dP04235 173 aa10.1□□□□□ -0.79
Scn8a-213ENSMUST00000201549 Parp1P11103 1013 aaKnown RBP10.1□□□□□ -0.79
Scn8a-213ENSMUST00000201549 Krt8P11679 490 aaKnown RBP10.1□□□□□ -0.79
Scn8a-213ENSMUST00000201549 XpcP51612 930 aa10.1□□□□□ -0.79
Scn8a-213ENSMUST00000201549 Pald1P70261 859 aa10.1□□□□□ -0.79
Retrieved 100 of 22,080 RNA–protein pairs in 17.5 ms