RNA–Protein interactions for RNA: ENSMUST00000165165.2

Col6a5-201, Transcript of Collagen alpha-5(VI) chain, mousemouse

TSL 5 BASIC

Gene Col6a5, Length 8,046 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a5-201ENSMUST00000165165 Nuak1Q641K5 658 aa10.15□□□□□ -0.78
Col6a5-201ENSMUST00000165165 Tdrd7Q8K1H1 1086 aaKnown RBP10.15□□□□□ -0.78
Col6a5-201ENSMUST00000165165 Plcb4Q91UZ1 1175 aa10.15□□□□□ -0.78
Col6a5-201ENSMUST00000165165 Trim66Q924W6 1242 aa10.15□□□□□ -0.78
Col6a5-201ENSMUST00000165165 Ccdc77Q9CZH8 489 aa10.15□□□□□ -0.78
Col6a5-201ENSMUST00000165165 Pdia3P27773 505 aaKnown RBP10.15□□□□□ -0.79
Col6a5-201ENSMUST00000165165 Tti2Q8BGV4 512 aa10.15□□□□□ -0.79
Col6a5-201ENSMUST00000165165 Rps6kb1Q8BSK8 525 aa10.15□□□□□ -0.79
Col6a5-201ENSMUST00000165165 Strip2Q8C9H6 844 aa10.15□□□□□ -0.79
Col6a5-201ENSMUST00000165165 Naip2Q9QUK4 1447 aa10.15□□□□□ -0.79
Col6a5-201ENSMUST00000165165 Pdha1P35486 390 aaKnown RBP10.14□□□□□ -0.79
Col6a5-201ENSMUST00000165165 Zap70P43404 618 aa10.14□□□□□ -0.79
Col6a5-201ENSMUST00000165165 Klhl38Q8BSF5 581 aa10.14□□□□□ -0.79
Col6a5-201ENSMUST00000165165 Adprhl2Q8CG72 370 aa10.14□□□□□ -0.79
Col6a5-201ENSMUST00000165165 Snx5Q9D8U8 404 aa10.14□□□□□ -0.79
Col6a5-201ENSMUST00000165165 XpcP51612 930 aa10.14□□□□□ -0.79
Col6a5-201ENSMUST00000165165 NficP70255 439 aa10.14□□□□□ -0.79
Col6a5-201ENSMUST00000165165 Irx1P81068 480 aa10.14□□□□□ -0.79
Col6a5-201ENSMUST00000165165 Q3UJC8 639 aa10.14□□□□□ -0.79
Col6a5-201ENSMUST00000165165 Znf652Q5DU09 608 aa10.14□□□□□ -0.79
Col6a5-201ENSMUST00000165165 Rab3ipQ68EF0 428 aa10.14□□□□□ -0.79
Col6a5-201ENSMUST00000165165 Arhgap29Q8CGF1 1266 aa10.14□□□□□ -0.79
Col6a5-201ENSMUST00000165165 ScgnQ91WD9 276 aa10.14□□□□□ -0.79
Col6a5-201ENSMUST00000165165 Nxf1Q99JX7 618 aaKnown RBP10.14□□□□□ -0.79
Col6a5-201ENSMUST00000165165 Gm2237E9Q501 211 aa10.14□□□□□ -0.79
Col6a5-201ENSMUST00000165165 Gm3591K7N6X2 186 aa10.14□□□□□ -0.79
Col6a5-201ENSMUST00000165165 Sash1P59808 1230 aa10.14□□□□□ -0.79
Col6a5-201ENSMUST00000165165 Epas1P97481 874 aa10.14□□□□□ -0.79
Col6a5-201ENSMUST00000165165 Pbxip1Q3TVI8 727 aa10.14□□□□□ -0.79
Col6a5-201ENSMUST00000165165 PaskQ8CEE6 1383 aa10.14□□□□□ -0.79
Col6a5-201ENSMUST00000165165 Myl1P05977 188 aa10.14□□□□□ -0.79
Col6a5-201ENSMUST00000165165 E330034G19RikQ3UWX6 351 aa10.14□□□□□ -0.79
Col6a5-201ENSMUST00000165165 Znf507Q6ZPY5 941 aa10.14□□□□□ -0.79
Col6a5-201ENSMUST00000165165 Ubxn11Q9D572 484 aa10.14□□□□□ -0.79
Col6a5-201ENSMUST00000165165 Serpinb12Q9D7P9 423 aa10.14□□□□□ -0.79
Col6a5-201ENSMUST00000165165 Lekr1B2RVN1 116 aa10.14□□□□□ -0.79
Col6a5-201ENSMUST00000165165 1700011I03RikE9PYL8 271 aa10.14□□□□□ -0.79
Col6a5-201ENSMUST00000165165 Sycp3P70281 254 aa10.14□□□□□ -0.79
Col6a5-201ENSMUST00000165165 Pdzrn3Q69ZS0 1063 aa10.14□□□□□ -0.79
Col6a5-201ENSMUST00000165165 CenpuQ8C4M7 410 aa10.14□□□□□ -0.79
Col6a5-201ENSMUST00000165165 Tada3Q8R0L9 432 aa10.14□□□□□ -0.79
Col6a5-201ENSMUST00000165165 Camsap1A2AHC3 1581 aa10.14□□□□□ -0.79
Col6a5-201ENSMUST00000165165 Lrriq4A6H6A4 596 aa10.14□□□□□ -0.79
Col6a5-201ENSMUST00000165165 NsfP46460 744 aa10.14□□□□□ -0.79
Col6a5-201ENSMUST00000165165 TrhQ62361 256 aa10.14□□□□□ -0.79
Col6a5-201ENSMUST00000165165 Pram1Q6BCL1 675 aa10.14□□□□□ -0.79
Col6a5-201ENSMUST00000165165 Caps2Q8BUG5 550 aa10.14□□□□□ -0.79
Col6a5-201ENSMUST00000165165 IydQ9DCX8 285 aa10.14□□□□□ -0.79
Col6a5-201ENSMUST00000165165 Col4a3bpQ9EQG9 624 aa10.14□□□□□ -0.79
Col6a5-201ENSMUST00000165165 Gm10639E9Q6L7 222 aa10.13□□□□□ -0.79
Col6a5-201ENSMUST00000165165 Gsta2P10648 222 aa10.13□□□□□ -0.79
Col6a5-201ENSMUST00000165165 Pank2Q3U4S0 443 aa10.13□□□□□ -0.79
Col6a5-201ENSMUST00000165165 HdlbpQ8VDJ3 1268 aaKnown RBP10.13□□□□□ -0.79
Col6a5-201ENSMUST00000165165 Psmd2Q8VDM4 908 aa10.13□□□□□ -0.79
Col6a5-201ENSMUST00000165165 Card14Q99KF0 999 aa10.13□□□□□ -0.79
Col6a5-201ENSMUST00000165165 Ncoa1P70365 1447 aa10.13□□□□□ -0.79
Col6a5-201ENSMUST00000165165 Eif6O55135 245 aa10.13□□□□□ -0.79
Col6a5-201ENSMUST00000165165 Stmn3O70166 180 aa10.13□□□□□ -0.79
Col6a5-201ENSMUST00000165165 Jdp2P97875 163 aa10.13□□□□□ -0.79
Col6a5-201ENSMUST00000165165 Kiaa1841Q68FF0 718 aa10.13□□□□□ -0.79
Col6a5-201ENSMUST00000165165 Gucy2gQ6TL19 1100 aa10.13□□□□□ -0.79
Col6a5-201ENSMUST00000165165 Dhx58Q99J87 678 aa10.13□□□□□ -0.79
Col6a5-201ENSMUST00000165165 Pdxdc1Q99K01 787 aaKnown RBP10.13□□□□□ -0.79
Col6a5-201ENSMUST00000165165 Tmtc2Q56A06 836 aa10.13□□□□□ -0.79
Col6a5-201ENSMUST00000165165 Prr18Q6PAN7 307 aa10.13□□□□□ -0.79
Col6a5-201ENSMUST00000165165 Fra10ac1Q8BP78 315 aa10.13□□□□□ -0.79
Col6a5-201ENSMUST00000165165 Lrrd1Q8C0R9 853 aa10.13□□□□□ -0.79
Col6a5-201ENSMUST00000165165 Rnaseh1O70338 285 aa10.13□□□□□ -0.79
Col6a5-201ENSMUST00000165165 Rab20P35295 233 aa10.13□□□□□ -0.79
Col6a5-201ENSMUST00000165165 Ano9P86044 747 aa10.13□□□□□ -0.79
Col6a5-201ENSMUST00000165165 Prdm1Q60636 856 aa10.13□□□□□ -0.79
Col6a5-201ENSMUST00000165165 Olfm5Q8BU90 496 aa10.13□□□□□ -0.79
Col6a5-201ENSMUST00000165165 Ccdc159Q8C963 411 aa10.13□□□□□ -0.79
Col6a5-201ENSMUST00000165165 Znf467Q8JZL0 594 aa10.13□□□□□ -0.79
Col6a5-201ENSMUST00000165165 Pcdhb5Q91XZ5 792 aa10.13□□□□□ -0.79
Col6a5-201ENSMUST00000165165 Q9CR55 154 aa10.13□□□□□ -0.79
Col6a5-201ENSMUST00000165165 Snx2Q9CWK8 519 aa10.13□□□□□ -0.79
Col6a5-201ENSMUST00000165165 E2f6O54917 272 aa10.13□□□□□ -0.79
Col6a5-201ENSMUST00000165165 Rasgrf1P27671 1262 aa10.13□□□□□ -0.79
Col6a5-201ENSMUST00000165165 PrimpolQ6P1E7 537 aa10.13□□□□□ -0.79
Col6a5-201ENSMUST00000165165 Ccdc169Q8BXX9 214 aa10.13□□□□□ -0.79
Col6a5-201ENSMUST00000165165 Cabp7Q91ZM8 215 aa10.13□□□□□ -0.79
Col6a5-201ENSMUST00000165165 Nccrp1G3X9C2 266 aa10.13□□□□□ -0.79
Col6a5-201ENSMUST00000165165 PsdQ5DTT2 1024 aa10.13□□□□□ -0.79
Col6a5-201ENSMUST00000165165 Osbpl5Q9ER64 874 aa10.13□□□□□ -0.79
Col6a5-201ENSMUST00000165165 Rsbn1lD3Z0K6 821 aa10.12□□□□□ -0.79
Col6a5-201ENSMUST00000165165 Mcmdc2E9Q956 681 aa10.12□□□□□ -0.79
Col6a5-201ENSMUST00000165165 Tlk2O55047 718 aa10.12□□□□□ -0.79
Col6a5-201ENSMUST00000165165 Pde9aO70628 534 aa10.12□□□□□ -0.79
Col6a5-201ENSMUST00000165165 Lrrc43Q3V0L5 667 aa10.12□□□□□ -0.79
Col6a5-201ENSMUST00000165165 OcrlQ6NVF0 900 aa10.12□□□□□ -0.79
Col6a5-201ENSMUST00000165165 Q8BZJ8 459 aa10.12□□□□□ -0.79
Col6a5-201ENSMUST00000165165 Snx30Q8CE50 437 aa10.12□□□□□ -0.79
Col6a5-201ENSMUST00000165165 Ivns1abpQ920Q8 642 aa10.12□□□□□ -0.79
Col6a5-201ENSMUST00000165165 Crocc2F6XLV1 1638 aa10.12□□□□□ -0.79
Col6a5-201ENSMUST00000165165 Mdm2P23804 489 aa10.12□□□□□ -0.79
Col6a5-201ENSMUST00000165165 Dnajc6Q80TZ3 938 aa10.12□□□□□ -0.79
Col6a5-201ENSMUST00000165165 Fyb2A2A995 729 aa10.12□□□□□ -0.79
Col6a5-201ENSMUST00000165165 Kcna1P16388 495 aa10.12□□□□□ -0.79
Col6a5-201ENSMUST00000165165 Eno3P21550 434 aa10.12□□□□□ -0.79
Retrieved 100 of 22,080 RNA–protein pairs in 31.6 ms