RNA–Protein interactions for RNA: ENSMUST00000115659.5

Pcdha9-201, Transcript of Protocadherin alpha-9, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdha9, Length 5,341 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha9-201ENSMUST00000115659 Art2aP17981 287 aa17■□□□□ 0.31
Pcdha9-201ENSMUST00000115659 Bbs9Q811G0 885 aa17■□□□□ 0.31
Pcdha9-201ENSMUST00000115659 Gpcpd1Q8C0L9 675 aa17■□□□□ 0.31
Pcdha9-201ENSMUST00000115659 SnrkQ8VDU5 748 aa17■□□□□ 0.31
Pcdha9-201ENSMUST00000115659 Telo2Q9DC40 840 aaKnown RBP17■□□□□ 0.31
Pcdha9-201ENSMUST00000115659 Pex11aQ9Z211 246 aa17■□□□□ 0.31
Pcdha9-201ENSMUST00000115659 GsdmeQ9Z2D3 512 aa17■□□□□ 0.31
Pcdha9-201ENSMUST00000115659 Atf2P16951 487 aaKnown RBP17■□□□□ 0.31
Pcdha9-201ENSMUST00000115659 Nxf2Q4ZGD8 691 aa17■□□□□ 0.31
Pcdha9-201ENSMUST00000115659 Fbxo11Q7TPD1 930 aaKnown RBP17■□□□□ 0.31
Pcdha9-201ENSMUST00000115659 Pih1h3bQ8C6P5 218 aa17■□□□□ 0.31
Pcdha9-201ENSMUST00000115659 Rsph3bQ9DA80 389 aa17■□□□□ 0.31
Pcdha9-201ENSMUST00000115659 Ccdc160Q3UYG1 323 aa17■□□□□ 0.31
Pcdha9-201ENSMUST00000115659 Q6PD19 689 aa17■□□□□ 0.31
Pcdha9-201ENSMUST00000115659 NkapQ9D0F4 415 aaKnown RBP17■□□□□ 0.31
Pcdha9-201ENSMUST00000115659 Rusc2Q80U22 1514 aa17■□□□□ 0.31
Pcdha9-201ENSMUST00000115659 Gm5936A2BG95 728 aa17■□□□□ 0.31
Pcdha9-201ENSMUST00000115659 Gm5640A3KG49 728 aa17■□□□□ 0.31
Pcdha9-201ENSMUST00000115659 Ccdc78D3Z5T1 437 aa17■□□□□ 0.31
Pcdha9-201ENSMUST00000115659 Parp2O88554 559 aa17■□□□□ 0.31
Pcdha9-201ENSMUST00000115659 XlrP05531 208 aa17■□□□□ 0.31
Pcdha9-201ENSMUST00000115659 Nsun2Q1HFZ0 757 aaKnown RBP17■□□□□ 0.31
Pcdha9-201ENSMUST00000115659 Ccdc169Q8BXX9 214 aa17■□□□□ 0.31
Pcdha9-201ENSMUST00000115659 Polr2bQ8CFI7 1174 aaKnown RBP17■□□□□ 0.31
Pcdha9-201ENSMUST00000115659 Appl2Q8K3G9 662 aa17■□□□□ 0.31
Pcdha9-201ENSMUST00000115659 MgarpQ8VI64 283 aa17■□□□□ 0.31
Pcdha9-201ENSMUST00000115659 Calr3Q9D9Q6 380 aa17■□□□□ 0.31
Pcdha9-201ENSMUST00000115659 HnrnpcQ9Z204 313 aaKnown RBP17■□□□□ 0.31
Pcdha9-201ENSMUST00000115659 Ppfia4B8QI36 1187 aa16.99■□□□□ 0.31
Pcdha9-201ENSMUST00000115659 1700013D24RikQ0P521 120 aa16.99■□□□□ 0.31
Pcdha9-201ENSMUST00000115659 Zbtb16Q3UQ17 673 aa16.99■□□□□ 0.31
Pcdha9-201ENSMUST00000115659 Ubn1Q4G0F8 1135 aa16.99■□□□□ 0.31
Pcdha9-201ENSMUST00000115659 Sorbs1Q62417 1290 aa16.99■□□□□ 0.31
Pcdha9-201ENSMUST00000115659 Trmt44Q9D2Q2 713 aa16.99■□□□□ 0.31
Pcdha9-201ENSMUST00000115659 Ccdc124Q9D8X2 217 aaKnown RBP16.99■□□□□ 0.31
Pcdha9-201ENSMUST00000115659 Gpaa1Q9WTK3 621 aa16.99■□□□□ 0.31
Pcdha9-201ENSMUST00000115659 Rps6ka2Q9WUT3 733 aa16.99■□□□□ 0.31
Pcdha9-201ENSMUST00000115659 Cyp3a57D3YYZ0 503 aa16.99■□□□□ 0.31
Pcdha9-201ENSMUST00000115659 Olfr247E9PVJ7 320 aa16.99■□□□□ 0.31
Pcdha9-201ENSMUST00000115659 Zfp94E9Q6Y4 486 aa16.99■□□□□ 0.31
Pcdha9-201ENSMUST00000115659 Olfr819K7N727 320 aa16.99■□□□□ 0.31
Pcdha9-201ENSMUST00000115659 SpertQ32MG2 446 aa16.99■□□□□ 0.31
Pcdha9-201ENSMUST00000115659 Kif11Q6P9P6 1052 aa16.99■□□□□ 0.31
Pcdha9-201ENSMUST00000115659 Spdl1Q923A2 608 aa16.99■□□□□ 0.31
Pcdha9-201ENSMUST00000115659 Stk39Q9Z1W9 556 aa16.99■□□□□ 0.31
Pcdha9-201ENSMUST00000115659 Sept2P42208 361 aaKnown RBP16.99■□□□□ 0.31
Pcdha9-201ENSMUST00000115659 Polr2fP61219 127 aa16.99■□□□□ 0.31
Pcdha9-201ENSMUST00000115659 Tmed8Q3UHI4 326 aa16.99■□□□□ 0.31
Pcdha9-201ENSMUST00000115659 Luc7l3Q5SUF2 432 aaKnown RBP16.99■□□□□ 0.31
Pcdha9-201ENSMUST00000115659 Crybg3Q80W49 1005 aa16.99■□□□□ 0.31
Pcdha9-201ENSMUST00000115659 Tex13cD3YU32 604 aa16.99■□□□□ 0.31
Pcdha9-201ENSMUST00000115659 Pgrmc1O55022 195 aa16.99■□□□□ 0.31
Pcdha9-201ENSMUST00000115659 Idh1O88844 414 aaKnown RBP16.99■□□□□ 0.31
Pcdha9-201ENSMUST00000115659 Kctd10Q922M3 315 aa16.99■□□□□ 0.31
Pcdha9-201ENSMUST00000115659 Pstpip2Q99M15 334 aa16.99■□□□□ 0.31
Pcdha9-201ENSMUST00000115659 Strn3Q9ERG2 796 aa16.99■□□□□ 0.31
Pcdha9-201ENSMUST00000115659 Rfwd2Q9R1A8 733 aaKnown RBP16.99■□□□□ 0.31
Pcdha9-201ENSMUST00000115659 Cpb1B2RS76 415 aa16.98■□□□□ 0.31
Pcdha9-201ENSMUST00000115659 Elmsan1E9Q2I4 1089 aaKnown RBP16.98■□□□□ 0.31
Pcdha9-201ENSMUST00000115659 Stk38lQ7TSE6 464 aa16.98■□□□□ 0.31
Pcdha9-201ENSMUST00000115659 Snx14Q8BHY8 964 aa16.98■□□□□ 0.31
Pcdha9-201ENSMUST00000115659 Ccdc15Q8C9M2 810 aa16.98■□□□□ 0.31
Pcdha9-201ENSMUST00000115659 Plcg2Q8CIH5 1265 aa16.98■□□□□ 0.31
Pcdha9-201ENSMUST00000115659 Ppil4Q9CXG3 492 aaKnown RBP16.98■□□□□ 0.31
Pcdha9-201ENSMUST00000115659 Tsc1Q9EP53 1161 aa16.98■□□□□ 0.31
Pcdha9-201ENSMUST00000115659 Tmem191cQ9JJB1 302 aa16.98■□□□□ 0.31
Pcdha9-201ENSMUST00000115659 Ppp2r3dQ9Z176 491 aa16.98■□□□□ 0.31
Pcdha9-201ENSMUST00000115659 Kif1bQ60575 1816 aaKnown RBP16.98■□□□□ 0.31
Pcdha9-201ENSMUST00000115659 Fdx1P46656 188 aa16.98■□□□□ 0.31
Pcdha9-201ENSMUST00000115659 Q3TTJ4 293 aa16.98■□□□□ 0.31
Pcdha9-201ENSMUST00000115659 Ankrd6Q69ZU8 712 aa16.98■□□□□ 0.31
Pcdha9-201ENSMUST00000115659 Apbb1ipQ8R5A3 670 aa16.98■□□□□ 0.31
Pcdha9-201ENSMUST00000115659 Trim42Q9D2H5 723 aa16.98■□□□□ 0.31
Pcdha9-201ENSMUST00000115659 Adamts12Q811B3 1600 aa16.98■□□□□ 0.31
Pcdha9-201ENSMUST00000115659 Cd22P35329 862 aa16.98■□□□□ 0.31
Pcdha9-201ENSMUST00000115659 GnptabQ69ZN6 1235 aa16.98■□□□□ 0.31
Pcdha9-201ENSMUST00000115659 Gbp5Q8CFB4 590 aa16.98■□□□□ 0.31
Pcdha9-201ENSMUST00000115659 Erp44Q9D1Q6 406 aa16.98■□□□□ 0.31
Pcdha9-201ENSMUST00000115659 Nos1Q9Z0J4 1429 aa16.98■□□□□ 0.31
Pcdha9-201ENSMUST00000115659 Serpinb6eI7HJI3 429 aa16.98■□□□□ 0.31
Pcdha9-201ENSMUST00000115659 Pla2g4eQ50L42 875 aa16.98■□□□□ 0.31
Pcdha9-201ENSMUST00000115659 Daam2Q80U19 1115 aa16.98■□□□□ 0.31
Pcdha9-201ENSMUST00000115659 Trim52Q8CDV4 233 aa16.98■□□□□ 0.31
Pcdha9-201ENSMUST00000115659 Rims1Q99NE5 1463 aa16.98■□□□□ 0.31
Pcdha9-201ENSMUST00000115659 4932429P05RikA2ADI4 785 aa16.97■□□□□ 0.31
Pcdha9-201ENSMUST00000115659 Mroh8E9PYI4 1049 aa16.97■□□□□ 0.31
Pcdha9-201ENSMUST00000115659 Cd72P21855 354 aa16.97■□□□□ 0.31
Pcdha9-201ENSMUST00000115659 Gpr182P43142 395 aa16.97■□□□□ 0.31
Pcdha9-201ENSMUST00000115659 Nbr1P97432 988 aa16.97■□□□□ 0.31
Pcdha9-201ENSMUST00000115659 Uggt1Q6P5E4 1551 aa16.97■□□□□ 0.31
Pcdha9-201ENSMUST00000115659 Ccdc68Q8BVC4 333 aa16.97■□□□□ 0.31
Pcdha9-201ENSMUST00000115659 CnstQ8CBC4 711 aa16.97■□□□□ 0.31
Pcdha9-201ENSMUST00000115659 Smc6Q924W5 1097 aa16.97■□□□□ 0.31
Pcdha9-201ENSMUST00000115659 HgsQ99LI8 775 aa16.97■□□□□ 0.31
Pcdha9-201ENSMUST00000115659 AacsQ9D2R0 672 aa16.97■□□□□ 0.31
Pcdha9-201ENSMUST00000115659 Rwdd2aQ9D9S3 292 aa16.97■□□□□ 0.31
Pcdha9-201ENSMUST00000115659 Gtf2iQ9ESZ8 998 aaKnown RBP16.97■□□□□ 0.31
Pcdha9-201ENSMUST00000115659 Gm5580A0A0N4SVP8 411 aa16.97■□□□□ 0.31
Pcdha9-201ENSMUST00000115659 Lonrf2B2RT44 518 aa16.97■□□□□ 0.31
Pcdha9-201ENSMUST00000115659 Eef1bO70251 225 aaKnown RBP16.97■□□□□ 0.31
Retrieved 100 of 22,080 RNA–protein pairs in 53.9 ms