RNA–Protein interactions for RNA: ENSMUST00000092215.5

Ccdc38-201, Transcript of Coiled-coil domain-containing protein 38, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ccdc38, Length 3,656 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc38-201ENSMUST00000092215 ArcQ9WV31 396 aa11.33□□□□□ -0.59
Ccdc38-201ENSMUST00000092215 Bcorl1A2AQH4 1781 aa11.33□□□□□ -0.6
Ccdc38-201ENSMUST00000092215 CatspereP0DP43 985 aa11.33□□□□□ -0.6
Ccdc38-201ENSMUST00000092215 Epha2Q03145 977 aa11.33□□□□□ -0.6
Ccdc38-201ENSMUST00000092215 Cnga2Q62398 664 aa11.33□□□□□ -0.6
Ccdc38-201ENSMUST00000092215 PicalmQ7M6Y3 660 aaKnown RBP11.33□□□□□ -0.6
Ccdc38-201ENSMUST00000092215 Cog5Q8C0L8 829 aa11.33□□□□□ -0.6
Ccdc38-201ENSMUST00000092215 MslnlQ8C160 685 aa11.33□□□□□ -0.6
Ccdc38-201ENSMUST00000092215 Mtmr3Q8K296 1196 aa11.33□□□□□ -0.6
Ccdc38-201ENSMUST00000092215 Kctd10Q922M3 315 aa11.33□□□□□ -0.6
Ccdc38-201ENSMUST00000092215 Cd274Q9EP73 290 aa11.33□□□□□ -0.6
Ccdc38-201ENSMUST00000092215 NrapQ80XB4 1728 aa11.33□□□□□ -0.6
Ccdc38-201ENSMUST00000092215 Ppp1r9aH3BJD6 1292 aa11.33□□□□□ -0.6
Ccdc38-201ENSMUST00000092215 NefhP19246 1090 aa11.33□□□□□ -0.6
Ccdc38-201ENSMUST00000092215 Fgfr2P21803 821 aa11.33□□□□□ -0.6
Ccdc38-201ENSMUST00000092215 Churc1Q6DG52 112 aa11.33□□□□□ -0.6
Ccdc38-201ENSMUST00000092215 Igbp1bQ9QZ29 343 aa11.33□□□□□ -0.6
Ccdc38-201ENSMUST00000092215 Acot9Q9R0X4 439 aaKnown RBP11.33□□□□□ -0.6
Ccdc38-201ENSMUST00000092215 Dock5B2RY04 1868 aa11.32□□□□□ -0.6
Ccdc38-201ENSMUST00000092215 Ampd3O08739 766 aa11.32□□□□□ -0.6
Ccdc38-201ENSMUST00000092215 AoahO35298 574 aa11.32□□□□□ -0.6
Ccdc38-201ENSMUST00000092215 Wnt7aP24383 349 aa11.32□□□□□ -0.6
Ccdc38-201ENSMUST00000092215 U2af2P26369 475 aaKnown RBP11.32□□□□□ -0.6
Ccdc38-201ENSMUST00000092215 Prpf4bQ61136 1007 aaKnown RBP11.32□□□□□ -0.6
Ccdc38-201ENSMUST00000092215 TicrrQ8BQ33 1889 aa11.32□□□□□ -0.6
Ccdc38-201ENSMUST00000092215 Tcp11l1Q8BTG3 509 aa11.32□□□□□ -0.6
Ccdc38-201ENSMUST00000092215 Mettl5Q8K1A0 209 aa11.32□□□□□ -0.6
Ccdc38-201ENSMUST00000092215 Trim11Q99PQ2 467 aa11.32□□□□□ -0.6
Ccdc38-201ENSMUST00000092215 Dph6Q9CQ28 267 aa11.32□□□□□ -0.6
Ccdc38-201ENSMUST00000092215 NkapQ9D0F4 415 aaKnown RBP11.32□□□□□ -0.6
Ccdc38-201ENSMUST00000092215 Ccng2O08918 344 aa11.32□□□□□ -0.6
Ccdc38-201ENSMUST00000092215 Tmem60Q8K174 133 aa11.32□□□□□ -0.6
Ccdc38-201ENSMUST00000092215 Fam83aQ8K2P2 436 aa11.32□□□□□ -0.6
Ccdc38-201ENSMUST00000092215 MyocdQ8VIM5 935 aa11.32□□□□□ -0.6
Ccdc38-201ENSMUST00000092215 Myo1hQ9D6A1 958 aa11.32□□□□□ -0.6
Ccdc38-201ENSMUST00000092215 AllcQ9JHX6 414 aa11.32□□□□□ -0.6
Ccdc38-201ENSMUST00000092215 Ccdc112A0AUP1 442 aa11.32□□□□□ -0.6
Ccdc38-201ENSMUST00000092215 Rad51bO35719 350 aa11.32□□□□□ -0.6
Ccdc38-201ENSMUST00000092215 Eps15P42567 897 aa11.32□□□□□ -0.6
Ccdc38-201ENSMUST00000092215 Rnf216P58283 853 aa11.32□□□□□ -0.6
Ccdc38-201ENSMUST00000092215 NfibP97863 570 aaKnown RBP11.32□□□□□ -0.6
Ccdc38-201ENSMUST00000092215 Islr2Q5RKR3 745 aa11.32□□□□□ -0.6
Ccdc38-201ENSMUST00000092215 BccipQ9CWI3 316 aa11.32□□□□□ -0.6
Ccdc38-201ENSMUST00000092215 Saal1Q9D2C2 474 aa11.32□□□□□ -0.6
Ccdc38-201ENSMUST00000092215 Ccnt1Q9QWV9 724 aaKnown RBP11.32□□□□□ -0.6
Ccdc38-201ENSMUST00000092215 Skint3A7TZF0 458 aa11.31□□□□□ -0.6
Ccdc38-201ENSMUST00000092215 Hoxc10P31257 342 aa11.31□□□□□ -0.6
Ccdc38-201ENSMUST00000092215 Polr3gQ6NXY9 223 aa11.31□□□□□ -0.6
Ccdc38-201ENSMUST00000092215 Prkag3Q8BGM7 489 aa11.31□□□□□ -0.6
Ccdc38-201ENSMUST00000092215 Gpatch3Q8BIY1 525 aa11.31□□□□□ -0.6
Ccdc38-201ENSMUST00000092215 MyripQ8K3I4 856 aa11.31□□□□□ -0.6
Ccdc38-201ENSMUST00000092215 Col4a3bpQ9EQG9 624 aa11.31□□□□□ -0.6
Ccdc38-201ENSMUST00000092215 Tnni3kQ5GIG6 834 aa11.31□□□□□ -0.6
Ccdc38-201ENSMUST00000092215 Acat1Q8QZT1 424 aa11.31□□□□□ -0.6
Ccdc38-201ENSMUST00000092215 Fam122aQ9DB52 284 aa11.31□□□□□ -0.6
Ccdc38-201ENSMUST00000092215 Akr1c19G3X9Y6 323 aa11.31□□□□□ -0.6
Ccdc38-201ENSMUST00000092215 Eif3j2Q66JS6 263 aa11.31□□□□□ -0.6
Ccdc38-201ENSMUST00000092215 Ift122Q6NWV3 1182 aa11.31□□□□□ -0.6
Ccdc38-201ENSMUST00000092215 LRWD1Q8BUI3 648 aaKnown RBP11.31□□□□□ -0.6
Ccdc38-201ENSMUST00000092215 Mrpl11Q9CQF0 192 aaKnown RBP11.31□□□□□ -0.6
Ccdc38-201ENSMUST00000092215 Krtap5-3Q9D226 196 aa11.31□□□□□ -0.6
Ccdc38-201ENSMUST00000092215 Ngly1Q9JI78 651 aa11.31□□□□□ -0.6
Ccdc38-201ENSMUST00000092215 Tbc1d2B1AVH7 922 aa11.3□□□□□ -0.6
Ccdc38-201ENSMUST00000092215 Slc39a2G3X943 309 aa11.3□□□□□ -0.6
Ccdc38-201ENSMUST00000092215 PparaP23204 468 aa11.3□□□□□ -0.6
Ccdc38-201ENSMUST00000092215 Stat3P42227 770 aaKnown RBP11.3□□□□□ -0.6
Ccdc38-201ENSMUST00000092215 Gas2l3Q3UWW6 683 aa11.3□□□□□ -0.6
Ccdc38-201ENSMUST00000092215 Lrrc36Q3V0M2 755 aa11.3□□□□□ -0.6
Ccdc38-201ENSMUST00000092215 Bbs9Q811G0 885 aa11.3□□□□□ -0.6
Ccdc38-201ENSMUST00000092215 Tspyl4Q8VD63 406 aa11.3□□□□□ -0.6
Ccdc38-201ENSMUST00000092215 IrgqQ8VIM9 583 aa11.3□□□□□ -0.6
Ccdc38-201ENSMUST00000092215 Hps3Q91VB4 1002 aa11.3□□□□□ -0.6
Ccdc38-201ENSMUST00000092215 Col2a1P28481 1487 aa11.3□□□□□ -0.6
Ccdc38-201ENSMUST00000092215 Myh7bA2AQP0 1941 aa11.3□□□□□ -0.6
Ccdc38-201ENSMUST00000092215 C87977A2A958 498 aa11.3□□□□□ -0.6
Ccdc38-201ENSMUST00000092215 Hoxa11P31311 313 aa11.3□□□□□ -0.6
Ccdc38-201ENSMUST00000092215 Rec8Q8C5S7 591 aa11.3□□□□□ -0.6
Ccdc38-201ENSMUST00000092215 Vta1Q9CR26 309 aa11.3□□□□□ -0.6
Ccdc38-201ENSMUST00000092215 Pramel3A2AHA7 463 aa11.3□□□□□ -0.6
Ccdc38-201ENSMUST00000092215 Gm7903A2AWL1 463 aa11.3□□□□□ -0.6
Ccdc38-201ENSMUST00000092215 AV320801A2AWL3 467 aa11.3□□□□□ -0.6
Ccdc38-201ENSMUST00000092215 Arhgap4B1AUY3 965 aa11.3□□□□□ -0.6
Ccdc38-201ENSMUST00000092215 Tex13cD3YU32 604 aa11.3□□□□□ -0.6
Ccdc38-201ENSMUST00000092215 Zc3h7bF8VPP8 982 aaKnown RBP11.3□□□□□ -0.6
Ccdc38-201ENSMUST00000092215 Gm15023L7MUB4 467 aa11.3□□□□□ -0.6
Ccdc38-201ENSMUST00000092215 Ube2hP62257 183 aa11.3□□□□□ -0.6
Ccdc38-201ENSMUST00000092215 Lrrcc1Q69ZB0 1026 aa11.3□□□□□ -0.6
Ccdc38-201ENSMUST00000092215 Hic2Q9JLZ6 619 aaKnown RBP11.3□□□□□ -0.6
Ccdc38-201ENSMUST00000092215 Sh3bgrQ9WUZ7 214 aa11.3□□□□□ -0.6
Ccdc38-201ENSMUST00000092215 Ripor3A1L3T7 938 aa11.29□□□□□ -0.6
Ccdc38-201ENSMUST00000092215 Gm15448F6PZL4 682 aa11.29□□□□□ -0.6
Ccdc38-201ENSMUST00000092215 Gcnt1Q09324 428 aa11.29□□□□□ -0.6
Ccdc38-201ENSMUST00000092215 Fam83hQ148V8 1209 aa11.29□□□□□ -0.6
Ccdc38-201ENSMUST00000092215 Cyp7b1Q60991 507 aa11.29□□□□□ -0.6
Ccdc38-201ENSMUST00000092215 Vgll2Q8BGW8 322 aa11.29□□□□□ -0.6
Ccdc38-201ENSMUST00000092215 Dcaf8Q8N7N5 591 aa11.29□□□□□ -0.6
Ccdc38-201ENSMUST00000092215 Hs2st1Q8R3H7 356 aa11.29□□□□□ -0.6
Ccdc38-201ENSMUST00000092215 Bhmt2Q91WS4 363 aa11.29□□□□□ -0.6
Ccdc38-201ENSMUST00000092215 Mov10l1Q99MV5 1187 aa11.29□□□□□ -0.6
Ccdc38-201ENSMUST00000092215 Elp3Q9CZX0 547 aa11.29□□□□□ -0.6
Retrieved 100 of 22,080 RNA–protein pairs in 15.5 ms