RNA–Protein interactions for RNA: ENSMUST00000042724.7

Usp38-201, Transcript of Ubiquitin carboxyl-terminal hydrolase 38, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Usp38, Length 4,707 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Usp38-201ENSMUST00000042724 Qrich1Q3UA37 777 aa16.81■□□□□ 0.28
Usp38-201ENSMUST00000042724 Znf219Q6IQX8 726 aa16.81■□□□□ 0.28
Usp38-201ENSMUST00000042724 PigsQ6PD26 555 aaKnown RBP16.81■□□□□ 0.28
Usp38-201ENSMUST00000042724 Nacc1Q7TSZ8 514 aa16.81■□□□□ 0.28
Usp38-201ENSMUST00000042724 CutaQ9CQ89 177 aa16.81■□□□□ 0.28
Usp38-201ENSMUST00000042724 Snrnp35Q9D384 244 aa16.81■□□□□ 0.28
Usp38-201ENSMUST00000042724 Copb1Q9JIF7 953 aa16.81■□□□□ 0.28
Usp38-201ENSMUST00000042724 Trpm1Q2TV84 1622 aa16.81■□□□□ 0.28
Usp38-201ENSMUST00000042724 Vat1lQ80TB8 417 aa16.81■□□□□ 0.28
Usp38-201ENSMUST00000042724 Pcdhb2Q91Y00 799 aa16.81■□□□□ 0.28
Usp38-201ENSMUST00000042724 Stx17Q9D0I4 301 aa16.81■□□□□ 0.28
Usp38-201ENSMUST00000042724 Stk32bQ9JJX8 414 aa16.81■□□□□ 0.28
Usp38-201ENSMUST00000042724 H2-OaQ9QWV1 250 aa16.81■□□□□ 0.28
Usp38-201ENSMUST00000042724 Gucy1b3O54865 620 aa16.8■□□□□ 0.28
Usp38-201ENSMUST00000042724 U2af2P26369 475 aaKnown RBP16.8■□□□□ 0.28
Usp38-201ENSMUST00000042724 Nom1Q3UFM5 854 aaKnown RBP16.8■□□□□ 0.28
Usp38-201ENSMUST00000042724 Specc1Q5SXY1 1067 aa16.8■□□□□ 0.28
Usp38-201ENSMUST00000042724 Arhgef18Q6P9R4 1021 aa16.8■□□□□ 0.28
Usp38-201ENSMUST00000042724 Ccdc14Q8K2J4 934 aa16.8■□□□□ 0.28
Usp38-201ENSMUST00000042724 Zfp804bA0A0G2JGH6 1343 aa16.8■□□□□ 0.28
Usp38-201ENSMUST00000042724 Pfkfb3A7UAK5 555 aa16.8■□□□□ 0.28
Usp38-201ENSMUST00000042724 Dnajb6O54946 365 aa16.8■□□□□ 0.28
Usp38-201ENSMUST00000042724 Opa1P58281 960 aa16.8■□□□□ 0.28
Usp38-201ENSMUST00000042724 Fam107bQ3TGF2 131 aa16.8■□□□□ 0.28
Usp38-201ENSMUST00000042724 Fam102bQ8BQS4 339 aa16.8■□□□□ 0.28
Usp38-201ENSMUST00000042724 SowahdQ8BY98 327 aa16.8■□□□□ 0.28
Usp38-201ENSMUST00000042724 Mrpl11Q9CQF0 192 aaKnown RBP16.8■□□□□ 0.28
Usp38-201ENSMUST00000042724 AacsQ9D2R0 672 aa16.8■□□□□ 0.28
Usp38-201ENSMUST00000042724 Rilpl1Q9JJC6 406 aa16.8■□□□□ 0.28
Usp38-201ENSMUST00000042724 Surf1P09925 306 aa16.8■□□□□ 0.28
Usp38-201ENSMUST00000042724 Gpr162Q3UN16 588 aa16.8■□□□□ 0.28
Usp38-201ENSMUST00000042724 Krt7Q9DCV7 457 aa16.8■□□□□ 0.28
Usp38-201ENSMUST00000042724 Ric8aQ3TIR3 530 aa16.79■□□□□ 0.28
Usp38-201ENSMUST00000042724 Spata21Q8BHW6 681 aa16.79■□□□□ 0.28
Usp38-201ENSMUST00000042724 Atp5c1Q91VR2 298 aaKnown RBP16.79■□□□□ 0.28
Usp38-201ENSMUST00000042724 Hic2Q9JLZ6 619 aaKnown RBP16.79■□□□□ 0.28
Usp38-201ENSMUST00000042724 Flt1P35969 1333 aa16.79■□□□□ 0.28
Usp38-201ENSMUST00000042724 Mst1rQ62190 1378 aa16.79■□□□□ 0.28
Usp38-201ENSMUST00000042724 Ankrd63A2ARS0 390 aa16.79■□□□□ 0.28
Usp38-201ENSMUST00000042724 Sclt1G5E861 688 aa16.79■□□□□ 0.28
Usp38-201ENSMUST00000042724 Tfcp2l1Q3UNW5 479 aa16.79■□□□□ 0.28
Usp38-201ENSMUST00000042724 Exosc10P56960 887 aaKnown RBP16.79■□□□□ 0.28
Usp38-201ENSMUST00000042724 DccP70211 1447 aa16.79■□□□□ 0.28
Usp38-201ENSMUST00000042724 Kmt5aQ2YDW7 349 aa16.79■□□□□ 0.28
Usp38-201ENSMUST00000042724 Il17raQ60943 864 aa16.79■□□□□ 0.28
Usp38-201ENSMUST00000042724 Zbtb7bQ64321 544 aa16.79■□□□□ 0.28
Usp38-201ENSMUST00000042724 Churc1Q6DG52 112 aa16.79■□□□□ 0.28
Usp38-201ENSMUST00000042724 Sdad1Q80UZ2 687 aaKnown RBP16.79■□□□□ 0.28
Usp38-201ENSMUST00000042724 Enox1Q8BHR2 643 aaKnown RBP16.79■□□□□ 0.28
Usp38-201ENSMUST00000042724 Cacnb3P54285 484 aa16.79■□□□□ 0.28
Usp38-201ENSMUST00000042724 ClasrpQ8CFC7 668 aa16.79■□□□□ 0.28
Usp38-201ENSMUST00000042724 Eef1gQ9D8N0 437 aaKnown RBP16.79■□□□□ 0.28
Usp38-201ENSMUST00000042724 Map3k15A2AQW0 1331 aa16.78■□□□□ 0.28
Usp38-201ENSMUST00000042724 Tcof1O08784 1320 aaKnown RBP16.78■□□□□ 0.28
Usp38-201ENSMUST00000042724 Rgl1Q60695 768 aa16.78■□□□□ 0.28
Usp38-201ENSMUST00000042724 Pank4Q80YV4 820 aa16.78■□□□□ 0.28
Usp38-201ENSMUST00000042724 Scfd1Q8BRF7 639 aaKnown RBP16.78■□□□□ 0.28
Usp38-201ENSMUST00000042724 Axin2O88566 840 aa16.78■□□□□ 0.28
Usp38-201ENSMUST00000042724 Stmn4P63042 189 aa16.78■□□□□ 0.28
Usp38-201ENSMUST00000042724 HomezQ80W88 542 aa16.78■□□□□ 0.28
Usp38-201ENSMUST00000042724 Kctd6Q8BNL5 237 aa16.78■□□□□ 0.28
Usp38-201ENSMUST00000042724 Ccdc28aQ8CEI3 192 aa16.78■□□□□ 0.28
Usp38-201ENSMUST00000042724 Acsl3Q9CZW4 720 aaKnown RBP16.78■□□□□ 0.28
Usp38-201ENSMUST00000042724 Lztfl1Q9JHQ5 299 aa16.78■□□□□ 0.28
Usp38-201ENSMUST00000042724 Brpf3B2KF05 1204 aaKnown RBP16.78■□□□□ 0.28
Usp38-201ENSMUST00000042724 Ctdnep1Q3TP92 244 aa16.78■□□□□ 0.28
Usp38-201ENSMUST00000042724 Slc9a1Q61165 820 aa16.78■□□□□ 0.28
Usp38-201ENSMUST00000042724 Cdk5rap2Q8K389 1822 aa16.78■□□□□ 0.28
Usp38-201ENSMUST00000042724 Gm28510A0A087WP28 240 aa16.78■□□□□ 0.28
Usp38-201ENSMUST00000042724 Npy5rO70342 466 aa16.78■□□□□ 0.28
Usp38-201ENSMUST00000042724 P4hbP09103 509 aaKnown RBP16.78■□□□□ 0.28
Usp38-201ENSMUST00000042724 SbdsP70122 250 aa16.78■□□□□ 0.28
Usp38-201ENSMUST00000042724 Xxylt1Q3U4G3 392 aa16.78■□□□□ 0.28
Usp38-201ENSMUST00000042724 Skor1Q8BX46 964 aa16.78■□□□□ 0.28
Usp38-201ENSMUST00000042724 Eif4enif1Q9EST3 983 aaKnown RBP16.78■□□□□ 0.28
Usp38-201ENSMUST00000042724 Gm11549A0A286YD83 63 aa16.77■□□□□ 0.28
Usp38-201ENSMUST00000042724 Ovgp1Q62010 721 aa16.77■□□□□ 0.28
Usp38-201ENSMUST00000042724 LRWD1Q8BUI3 648 aaKnown RBP16.77■□□□□ 0.28
Usp38-201ENSMUST00000042724 Samd15F6XZJ7 620 aa16.77■□□□□ 0.28
Usp38-201ENSMUST00000042724 Trim6Q8BGE7 488 aa16.77■□□□□ 0.28
Usp38-201ENSMUST00000042724 Vps52Q8C754 723 aaKnown RBP16.77■□□□□ 0.28
Usp38-201ENSMUST00000042724 Znf830Q8R1N0 363 aaKnown RBP16.77■□□□□ 0.28
Usp38-201ENSMUST00000042724 Pdzd4Q9QY39 772 aa16.77■□□□□ 0.28
Usp38-201ENSMUST00000042724 Nmt2O70311 529 aa16.77■□□□□ 0.27
Usp38-201ENSMUST00000042724 Smarcad1Q04692 1021 aa16.77■□□□□ 0.27
Usp38-201ENSMUST00000042724 Gbp8Q2V6D6 525 aa16.77■□□□□ 0.27
Usp38-201ENSMUST00000042724 LdhdQ7TNG8 484 aa16.77■□□□□ 0.27
Usp38-201ENSMUST00000042724 Anks1bQ8BIZ1 1259 aa16.77■□□□□ 0.27
Usp38-201ENSMUST00000042724 IarsQ8BU30 1262 aa16.77■□□□□ 0.27
Usp38-201ENSMUST00000042724 Hgh1Q8C3I8 393 aa16.77■□□□□ 0.27
Usp38-201ENSMUST00000042724 Arl6ip4Q9JM93 229 aa16.77■□□□□ 0.27
Usp38-201ENSMUST00000042724 Bcl9Q9D219 1425 aa16.77■□□□□ 0.27
Usp38-201ENSMUST00000042724 Pik3caP42337 1068 aa16.77■□□□□ 0.27
Usp38-201ENSMUST00000042724 Sval3Q76I99 144 aa16.77■□□□□ 0.27
Usp38-201ENSMUST00000042724 Slc12a8Q8VI23 705 aa16.77■□□□□ 0.27
Usp38-201ENSMUST00000042724 MesdQ9ERE7 224 aa16.77■□□□□ 0.27
Usp38-201ENSMUST00000042724 Cnbd1B1AWM0 430 aa16.76■□□□□ 0.27
Usp38-201ENSMUST00000042724 Pdzph1Q8BGR1 1238 aa16.76■□□□□ 0.27
Usp38-201ENSMUST00000042724 Ccdc169Q8BXX9 214 aa16.76■□□□□ 0.27
Usp38-201ENSMUST00000042724 Lmbrd1Q8K0B2 537 aa16.76■□□□□ 0.27
Retrieved 100 of 22,080 RNA–protein pairs in 53.3 ms