RNA–Protein interactions for RNA: ENSMUST00000033088.7

Rnf40-201, Transcript of E3 ubiquitin-protein ligase BRE1B, mousemouse

TSL 5 BASIC

Gene Rnf40, Length 3,906 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf40-201ENSMUST00000033088 Bcl9lQ67FY2 1494 aa11.81□□□□□ -0.52
Rnf40-201ENSMUST00000033088 Serpinb6eI7HJI3 429 aa11.8□□□□□ -0.52
Rnf40-201ENSMUST00000033088 Adssl1P28650 457 aa11.8□□□□□ -0.52
Rnf40-201ENSMUST00000033088 Krt15Q61414 452 aa11.8□□□□□ -0.52
Rnf40-201ENSMUST00000033088 Dnajc28Q8VCE1 385 aa11.8□□□□□ -0.52
Rnf40-201ENSMUST00000033088 Eaf2Q91ZD6 262 aa11.8□□□□□ -0.52
Rnf40-201ENSMUST00000033088 Gbp2Q9Z0E6 589 aa11.8□□□□□ -0.52
Rnf40-201ENSMUST00000033088 Serpinc1P32261 465 aa11.8□□□□□ -0.52
Rnf40-201ENSMUST00000033088 PrimpolQ6P1E7 537 aa11.8□□□□□ -0.52
Rnf40-201ENSMUST00000033088 Sh3d21Q7TSG5 549 aa11.8□□□□□ -0.52
Rnf40-201ENSMUST00000033088 Hdac9Q99N13 588 aa11.8□□□□□ -0.52
Rnf40-201ENSMUST00000033088 Dctpp1Q9QY93 170 aa11.8□□□□□ -0.52
Rnf40-201ENSMUST00000033088 Polr2fP61219 127 aa11.8□□□□□ -0.52
Rnf40-201ENSMUST00000033088 Tlr11Q6R5P0 926 aa11.8□□□□□ -0.52
Rnf40-201ENSMUST00000033088 ThemisQ8BGW0 636 aa11.8□□□□□ -0.52
Rnf40-201ENSMUST00000033088 DlatQ8BMF4 642 aa11.8□□□□□ -0.52
Rnf40-201ENSMUST00000033088 Ints4Q8CIM8 964 aa11.8□□□□□ -0.52
Rnf40-201ENSMUST00000033088 Enox2Q8R0Z2 598 aa11.8□□□□□ -0.52
Rnf40-201ENSMUST00000033088 Cep19Q9CQA8 163 aa11.8□□□□□ -0.52
Rnf40-201ENSMUST00000033088 InsrrQ9WTL4 1300 aa11.8□□□□□ -0.52
Rnf40-201ENSMUST00000033088 Ift81O35594 676 aa11.8□□□□□ -0.52
Rnf40-201ENSMUST00000033088 Rgs9O54828 675 aa11.8□□□□□ -0.52
Rnf40-201ENSMUST00000033088 Traf1P39428 409 aa11.8□□□□□ -0.52
Rnf40-201ENSMUST00000033088 Epha2Q03145 977 aa11.8□□□□□ -0.52
Rnf40-201ENSMUST00000033088 Ifit1bl2Q3U687 466 aa11.8□□□□□ -0.52
Rnf40-201ENSMUST00000033088 Arhgap18Q8K0Q5 663 aa11.8□□□□□ -0.52
Rnf40-201ENSMUST00000033088 Lrrc14Q8VC16 493 aa11.8□□□□□ -0.52
Rnf40-201ENSMUST00000033088 Eif4a3Q91VC3 411 aaKnown RBP11.8□□□□□ -0.52
Rnf40-201ENSMUST00000033088 Fbxo3Q9DC63 480 aa11.8□□□□□ -0.52
Rnf40-201ENSMUST00000033088 Actn2Q9JI91 894 aa11.8□□□□□ -0.52
Rnf40-201ENSMUST00000033088 Ankrd2Q9WV06 328 aa11.8□□□□□ -0.52
Rnf40-201ENSMUST00000033088 Syde2E9PUP1 1314 aa11.79□□□□□ -0.52
Rnf40-201ENSMUST00000033088 Lrrfip1Q3UZ39 729 aaKnown RBP11.79□□□□□ -0.52
Rnf40-201ENSMUST00000033088 Mum1l1Q4VA55 681 aa11.79□□□□□ -0.52
Rnf40-201ENSMUST00000033088 Otop3Q80UF9 577 aa11.79□□□□□ -0.52
Rnf40-201ENSMUST00000033088 Ndufb9Q9CQJ8 179 aa11.79□□□□□ -0.52
Rnf40-201ENSMUST00000033088 Adgrb1Q3UHD1 1582 aa11.79□□□□□ -0.52
Rnf40-201ENSMUST00000033088 1700018F24RikB2RW27 314 aa11.79□□□□□ -0.52
Rnf40-201ENSMUST00000033088 Diaph2O70566 1098 aa11.79□□□□□ -0.52
Rnf40-201ENSMUST00000033088 Ppp4r3aQ6P2K6 820 aa11.79□□□□□ -0.52
Rnf40-201ENSMUST00000033088 NfrkbQ6PIJ4 1296 aaKnown RBP11.79□□□□□ -0.52
Rnf40-201ENSMUST00000033088 Lrrc45Q8CIM1 670 aa11.79□□□□□ -0.52
Rnf40-201ENSMUST00000033088 Tbx22Q8K402 517 aa11.79□□□□□ -0.52
Rnf40-201ENSMUST00000033088 Pcdhb22Q91XZ8 794 aa11.79□□□□□ -0.52
Rnf40-201ENSMUST00000033088 Grin3bQ91ZU9 1003 aa11.79□□□□□ -0.52
Rnf40-201ENSMUST00000033088 1700020D05RikQ99PB1 294 aa11.79□□□□□ -0.52
Rnf40-201ENSMUST00000033088 UvssaQ9D479 717 aa11.79□□□□□ -0.52
Rnf40-201ENSMUST00000033088 Taf4bG5E8Z2 855 aa11.79□□□□□ -0.52
Rnf40-201ENSMUST00000033088 Hoxa7P02830 229 aa11.79□□□□□ -0.52
Rnf40-201ENSMUST00000033088 Krt8P11679 490 aaKnown RBP11.79□□□□□ -0.52
Rnf40-201ENSMUST00000033088 PolrmtQ8BKF1 1207 aaKnown RBP11.79□□□□□ -0.52
Rnf40-201ENSMUST00000033088 Fam228aQ8CDW1 299 aa11.79□□□□□ -0.52
Rnf40-201ENSMUST00000033088 GlyctkQ8QZY2 523 aa11.79□□□□□ -0.52
Rnf40-201ENSMUST00000033088 Tc2nQ91XT6 489 aa11.79□□□□□ -0.52
Rnf40-201ENSMUST00000033088 Tgs1Q923W1 853 aa11.79□□□□□ -0.52
Rnf40-201ENSMUST00000033088 Ccdc124Q9D8X2 217 aaKnown RBP11.79□□□□□ -0.52
Rnf40-201ENSMUST00000033088 DohhA0A1Y7VJ29 135 aa11.78□□□□□ -0.52
Rnf40-201ENSMUST00000033088 Speer4dL7N216 212 aa11.78□□□□□ -0.52
Rnf40-201ENSMUST00000033088 Scp2P32020 547 aaKnown RBP11.78□□□□□ -0.52
Rnf40-201ENSMUST00000033088 Tubb5P99024 444 aaKnown RBP11.78□□□□□ -0.52
Rnf40-201ENSMUST00000033088 Slc30a9Q5IRJ6 567 aa11.78□□□□□ -0.52
Rnf40-201ENSMUST00000033088 Ccpg1Q640L3 753 aa11.78□□□□□ -0.52
Rnf40-201ENSMUST00000033088 Cyp24a1Q64441 514 aa11.78□□□□□ -0.52
Rnf40-201ENSMUST00000033088 Nlrp4fQ66X05 959 aa11.78□□□□□ -0.52
Rnf40-201ENSMUST00000033088 Dhx37Q6NZL1 1150 aa11.78□□□□□ -0.52
Rnf40-201ENSMUST00000033088 Fgd5Q80UZ0 1219 aa11.78□□□□□ -0.52
Rnf40-201ENSMUST00000033088 Ubxn10Q8BG34 277 aa11.78□□□□□ -0.52
Rnf40-201ENSMUST00000033088 Spata4Q8K3V1 295 aa11.78□□□□□ -0.52
Rnf40-201ENSMUST00000033088 Rgs12Q8CGE9 1381 aa11.78□□□□□ -0.52
Rnf40-201ENSMUST00000033088 Ftl2P49945 183 aa11.78□□□□□ -0.52
Rnf40-201ENSMUST00000033088 Dact3Q0PHV7 610 aa11.78□□□□□ -0.52
Rnf40-201ENSMUST00000033088 Cep70Q6IQY5 616 aa11.78□□□□□ -0.52
Rnf40-201ENSMUST00000033088 Mtss1lQ6P9S0 715 aa11.78□□□□□ -0.52
Rnf40-201ENSMUST00000033088 Herc4Q6PAV2 1057 aa11.78□□□□□ -0.52
Rnf40-201ENSMUST00000033088 TwistnbQ78WZ7 330 aaKnown RBP11.78□□□□□ -0.52
Rnf40-201ENSMUST00000033088 Enox1Q8BHR2 643 aaKnown RBP11.78□□□□□ -0.52
Rnf40-201ENSMUST00000033088 Cep85Q8BMK0 761 aa11.78□□□□□ -0.52
Rnf40-201ENSMUST00000033088 Fam53cQ8BXQ8 393 aa11.78□□□□□ -0.52
Rnf40-201ENSMUST00000033088 Cfap36Q8C6E0 343 aa11.78□□□□□ -0.52
Rnf40-201ENSMUST00000033088 Hexim1Q8R409 356 aaKnown RBP11.78□□□□□ -0.52
Rnf40-201ENSMUST00000033088 Slc14a2Q8R4T9 930 aa11.78□□□□□ -0.52
Rnf40-201ENSMUST00000033088 Bzw2Q91VK1 419 aaKnown RBP11.78□□□□□ -0.52
Rnf40-201ENSMUST00000033088 Tacc2Q9JJG0 1149 aa11.78□□□□□ -0.52
Rnf40-201ENSMUST00000033088 Apol6B7ZC55 329 aa11.78□□□□□ -0.52
Rnf40-201ENSMUST00000033088 Cops6O88545 324 aa11.78□□□□□ -0.52
Rnf40-201ENSMUST00000033088 Eno1P17182 434 aaKnown RBP11.78□□□□□ -0.52
Rnf40-201ENSMUST00000033088 Exoc3Q6KAR6 755 aa11.78□□□□□ -0.52
Rnf40-201ENSMUST00000033088 Aldh5a1Q8BWF0 523 aa11.78□□□□□ -0.52
Rnf40-201ENSMUST00000033088 Gimap5Q8BWF2 308 aa11.78□□□□□ -0.52
Rnf40-201ENSMUST00000033088 Wbp11Q923D5 641 aaKnown RBP11.78□□□□□ -0.52
Rnf40-201ENSMUST00000033088 4930550L24RikQ99PA7 320 aa11.78□□□□□ -0.52
Rnf40-201ENSMUST00000033088 Gpihbp1Q9D1N2 228 aa11.78□□□□□ -0.52
Rnf40-201ENSMUST00000033088 Cfap53Q9D439 514 aa11.78□□□□□ -0.52
Rnf40-201ENSMUST00000033088 Znf654Q9DAU9 571 aa11.78□□□□□ -0.52
Rnf40-201ENSMUST00000033088 Ddx23D3Z0M9 819 aaKnown RBP11.77□□□□□ -0.52
Rnf40-201ENSMUST00000033088 Sept7O55131 436 aa11.77□□□□□ -0.52
Rnf40-201ENSMUST00000033088 Calm1P0DP26 149 aaKnown RBP11.77□□□□□ -0.52
Rnf40-201ENSMUST00000033088 Calm2P0DP27 149 aaKnown RBP11.77□□□□□ -0.52
Rnf40-201ENSMUST00000033088 Calm3P0DP28 149 aaKnown RBP11.77□□□□□ -0.52
Rnf40-201ENSMUST00000033088 IvlP48997 467 aa11.77□□□□□ -0.52
Retrieved 100 of 22,080 RNA–protein pairs in 12.4 ms