RNA–Protein interactions for RNA: YPL154C

PEP4, Transcript of Vacuolar aspartyl protease (proteinase A), yeast

Gene PEP4, Length 1,218 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PEP4	YPL154C	CCT6	P39079	546 aa		4.57	□□□□□ -1.68
PEP4	YPL154C	SIT1	P39980	628 aa		4.57	□□□□□ -1.68
PEP4	YPL154C	RAD26	P40352	1085 aa		4.57	□□□□□ -1.68
PEP4	YPL154C	CIR1	P42940	261 aa		4.57	□□□□□ -1.68
PEP4	YPL154C	SET2	P46995	733 aa	Known RBP	4.57	□□□□□ -1.68
PEP4	YPL154C	INP2	Q03824	705 aa		4.57	□□□□□ -1.68
PEP4	YPL154C	PPN1	Q04119	674 aa		4.57	□□□□□ -1.68
PEP4	YPL154C	ARA2	Q04212	335 aa		4.57	□□□□□ -1.68
PEP4	YPL154C	MCP2	Q06567	569 aa		4.57	□□□□□ -1.68
PEP4	YPL154C	YLL032C	Q07834	825 aa	Known RBP RIP-Chip data	4.57	□□□□□ -1.68	not detected
PEP4	YPL154C	ATG10	Q07879	167 aa		4.57	□□□□□ -1.68
PEP4	YPL154C	EMP46	Q12396	444 aa		4.57	□□□□□ -1.68
PEP4	YPL154C	VPS5	Q92331	675 aa		4.57	□□□□□ -1.68
PEP4	YPL154C	TUB3	P09734	445 aa	Known RBP	4.56	□□□□□ -1.68
PEP4	YPL154C	YPK1	P12688	680 aa	Known RBP	4.56	□□□□□ -1.68
PEP4	YPL154C	EST1	P17214	699 aa	Predicted RBP	4.56	□□□□□ -1.68
PEP4	YPL154C	PPH21	P23594	369 aa		4.56	□□□□□ -1.68
PEP4	YPL154C	SAC6	P32599	642 aa	Known RBP	4.56	□□□□□ -1.68
PEP4	YPL154C	YKT6	P36015	200 aa	Known RBP	4.56	□□□□□ -1.68
PEP4	YPL154C	IRR1	P40541	1150 aa		4.56	□□□□□ -1.68
PEP4	YPL154C	AIP1	P46680	615 aa	Known RBP	4.56	□□□□□ -1.68
PEP4	YPL154C	RPS10B	P46784	105 aa	Known RBP	4.56	□□□□□ -1.68
PEP4	YPL154C	UBX6	P47049	396 aa		4.56	□□□□□ -1.68
PEP4	YPL154C	NBP35	P52920	328 aa		4.56	□□□□□ -1.68
PEP4	YPL154C	TEP1	P53916	434 aa		4.56	□□□□□ -1.68
PEP4	YPL154C	TGL2	P54857	326 aa		4.56	□□□□□ -1.68
PEP4	YPL154C	SND1	Q04007	877 aa		4.56	□□□□□ -1.68
PEP4	YPL154C	YPR114W	Q06107	315 aa		4.56	□□□□□ -1.68
PEP4	YPL154C	RPS10A	Q08745	105 aa	Predicted RBP	4.56	□□□□□ -1.68
PEP4	YPL154C	YOR338W	Q99326	363 aa		4.56	□□□□□ -1.68
PEP4	YPL154C	CDC33	P07260	213 aa	Known RBP	4.55	□□□□□ -1.68
PEP4	YPL154C	BIK1	P11709	440 aa		4.55	□□□□□ -1.68
PEP4	YPL154C	RFA1	P22336	621 aa	Known RBP	4.55	□□□□□ -1.68
PEP4	YPL154C	TFC3	P34111	1160 aa		4.55	□□□□□ -1.68
PEP4	YPL154C	MTH1	P35198	433 aa		4.55	□□□□□ -1.68
PEP4	YPL154C	CTF13	P35203	478 aa		4.55	□□□□□ -1.68
PEP4	YPL154C	CTF8	P38877	133 aa		4.55	□□□□□ -1.68
PEP4	YPL154C	YAL037W	P39728	267 aa		4.55	□□□□□ -1.68
PEP4	YPL154C	SAP185	P40856	1058 aa		4.55	□□□□□ -1.68
PEP4	YPL154C	CEP3	P40969	608 aa		4.55	□□□□□ -1.68
PEP4	YPL154C	SNZ3	P43545	298 aa		4.55	□□□□□ -1.68
PEP4	YPL154C	YGR237C	P50089	785 aa		4.55	□□□□□ -1.68
PEP4	YPL154C	SNZ2	P53824	298 aa		4.55	□□□□□ -1.68
PEP4	YPL154C	DOS2	P54858	310 aa		4.55	□□□□□ -1.68
PEP4	YPL154C	TIM44	Q01852	431 aa		4.55	□□□□□ -1.68
PEP4	YPL154C	EGD1	Q02642	157 aa	Known RBP	4.55	□□□□□ -1.68
PEP4	YPL154C	POB3	Q04636	552 aa	Known RBP	4.55	□□□□□ -1.68
PEP4	YPL154C	YAP7	Q08182	245 aa		4.55	□□□□□ -1.68
PEP4	YPL154C	TRE2	Q08693	809 aa		4.55	□□□□□ -1.68
PEP4	YPL154C	SCL1	P21243	252 aa	Known RBP	4.54	□□□□□ -1.68
PEP4	YPL154C	AAT2	P23542	418 aa	Known RBP	4.54	□□□□□ -1.68
PEP4	YPL154C	LDB16	P25587	256 aa		4.54	□□□□□ -1.68
PEP4	YPL154C	SEC1	P30619	724 aa	Known RBP	4.54	□□□□□ -1.68
PEP4	YPL154C	HBS1	P32769	611 aa	Known RBP	4.54	□□□□□ -1.68
PEP4	YPL154C	TAF14	P35189	244 aa		4.54	□□□□□ -1.68
PEP4	YPL154C	PIM1	P36775	1133 aa		4.54	□□□□□ -1.68
PEP4	YPL154C	CBR1	P38626	284 aa	Known RBP	4.54	□□□□□ -1.68
PEP4	YPL154C	YHL041W	P38730	149 aa		4.54	□□□□□ -1.68
PEP4	YPL154C	FAU1	P40099	211 aa		4.54	□□□□□ -1.68
PEP4	YPL154C	YER189W	P40104	122 aa		4.54	□□□□□ -1.68
PEP4	YPL154C	TOK1	P40310	691 aa		4.54	□□□□□ -1.68
PEP4	YPL154C	DLD2	P46681	530 aa	Known RBP	4.54	□□□□□ -1.68
PEP4	YPL154C	PCL10	P53124	433 aa		4.54	□□□□□ -1.68
PEP4	YPL154C	SPC105	P53148	917 aa		4.54	□□□□□ -1.68
PEP4	YPL154C	GND2	P53319	492 aa		4.54	□□□□□ -1.68
PEP4	YPL154C	YGR283C	P53336	341 aa	Predicted RBP	4.54	□□□□□ -1.68
PEP4	YPL154C	YKR011C	Q02209	353 aa		4.54	□□□□□ -1.68
PEP4	YPL154C	SXM1	Q04175	944 aa	Known RBP	4.54	□□□□□ -1.68
PEP4	YPL154C	DIC1	Q06143	298 aa		4.54	□□□□□ -1.68
PEP4	YPL154C	BSC6	Q08280	497 aa		4.54	□□□□□ -1.68
PEP4	YPL154C	FRE5	Q08908	694 aa		4.54	□□□□□ -1.68
PEP4	YPL154C	VPS68	Q12016	184 aa		4.54	□□□□□ -1.68
PEP4	YPL154C	SWM1	Q12379	170 aa		4.54	□□□□□ -1.68
PEP4	YPL154C	SEC16	P48415	2195 aa	Known RBP	4.53	□□□□□ -1.68
PEP4	YPL154C	BI2	P03873	423 aa		4.53	□□□□□ -1.68
PEP4	YPL154C	PMA2	P19657	947 aa		4.53	□□□□□ -1.68
PEP4	YPL154C	ADY2	P25613	283 aa		4.53	□□□□□ -1.68
PEP4	YPL154C	ALY1	P36117	915 aa		4.53	□□□□□ -1.68
PEP4	YPL154C	MSR1	P38714	643 aa		4.53	□□□□□ -1.68
PEP4	YPL154C	SPF1	P39986	1215 aa	Known RBP	4.53	□□□□□ -1.68
PEP4	YPL154C	ATF1	P40353	525 aa		4.53	□□□□□ -1.68
PEP4	YPL154C	MKT1	P40850	830 aa	Known RBP	4.53	□□□□□ -1.68
PEP4	YPL154C	YJL132W	P47014	750 aa		4.53	□□□□□ -1.68
PEP4	YPL154C	BIR1	P47134	954 aa		4.53	□□□□□ -1.68
PEP4	YPL154C	YPT11	P48559	417 aa		4.53	□□□□□ -1.68
PEP4	YPL154C	VHS1	Q03785	461 aa		4.53	□□□□□ -1.68
PEP4	YPL154C	ERV41	Q04651	352 aa		4.53	□□□□□ -1.68
PEP4	YPL154C	ARG7	Q04728	441 aa		4.53	□□□□□ -1.68
PEP4	YPL154C	STP3	Q05937	343 aa		4.53	□□□□□ -1.68
PEP4	YPL154C	HBT1	Q07653	1046 aa	Known RBP	4.53	□□□□□ -1.68
PEP4	YPL154C	DDP1	Q99321	188 aa	Known RBP	4.53	□□□□□ -1.68
PEP4	YPL154C	BI3	Q9ZZW7	517 aa		4.53	□□□□□ -1.68
PEP4	YPL154C	TUB1	P09733	447 aa	Known RBP	4.52	□□□□□ -1.69
PEP4	YPL154C	SCH9	P11792	824 aa	Known RBP	4.52	□□□□□ -1.69
PEP4	YPL154C	GLN4	P13188	809 aa	Known RBP	4.52	□□□□□ -1.69
PEP4	YPL154C	SPR1	P32603	445 aa		4.52	□□□□□ -1.69
PEP4	YPL154C	SPC42	P36094	363 aa		4.52	□□□□□ -1.69
PEP4	YPL154C	TRZ1	P36159	838 aa	Predicted RBP	4.52	□□□□□ -1.69
PEP4	YPL154C	YBR184W	P38299	523 aa		4.52	□□□□□ -1.69
PEP4	YPL154C	SRP72	P38688	640 aa	Known RBP	4.52	□□□□□ -1.69

Retrieved 100 of 5,963 RNA–protein pairs in 23.1 ms