RNA–Protein interactions for RNA: ENST00000641927.1

PHGDH-230, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,678 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-230ENST00000641927 FDPSP14324 419 aaKnown RBP20.24■□□□□ 0.83
PHGDH-230ENST00000641927 SMARCA1P28370 1054 aa20.24■□□□□ 0.83
PHGDH-230ENST00000641927 SLC35G1Q2M3R5 365 aa20.24■□□□□ 0.83
PHGDH-230ENST00000641927 SYDE2Q5VT97 1194 aa20.24■□□□□ 0.83
PHGDH-230ENST00000641927 PAXIP1Q6ZW49 1069 aaPredicted RBP20.24■□□□□ 0.83
PHGDH-230ENST00000641927 RRP36Q96EU6 259 aaKnown RBP20.24■□□□□ 0.83
PHGDH-230ENST00000641927 CWC22Q9HCG8 908 aaKnown RBP20.24■□□□□ 0.83
PHGDH-230ENST00000641927 FBXO28Q9NVF7 368 aa20.24■□□□□ 0.83
PHGDH-230ENST00000641927 SEC63Q9UGP8 760 aaKnown RBP20.24■□□□□ 0.83
PHGDH-230ENST00000641927 DEXIO95424 95 aa20.23■□□□□ 0.83
PHGDH-230ENST00000641927 GTF2A2P52657 109 aa20.23■□□□□ 0.83
PHGDH-230ENST00000641927 FOSBP53539 338 aa20.23■□□□□ 0.83
PHGDH-230ENST00000641927 TREML2Q5T2D2 321 aa20.23■□□□□ 0.83
PHGDH-230ENST00000641927 FASTKD5Q7L8L6 764 aaKnown RBP20.23■□□□□ 0.83
PHGDH-230ENST00000641927 FAM160B2Q86V87 743 aa20.23■□□□□ 0.83
PHGDH-230ENST00000641927 RASAL3Q86YV0 1011 aa20.23■□□□□ 0.83
PHGDH-230ENST00000641927 PROCA1Q8NCQ7 364 aaPredicted RBP20.23■□□□□ 0.83
PHGDH-230ENST00000641927 PIGSQ96S52 555 aa20.23■□□□□ 0.83
PHGDH-230ENST00000641927 RIOX1Q9H6W3 641 aa20.23■□□□□ 0.83
PHGDH-230ENST00000641927 STK36Q9NRP7 1315 aa20.23■□□□□ 0.83
PHGDH-230ENST00000641927 BTNL9Q6UXG8 535 aa20.22■□□□□ 0.83
PHGDH-230ENST00000641927 WASF1Q92558 559 aa20.22■□□□□ 0.83
PHGDH-230ENST00000641927 SLF1Q9BQI6 1058 aa20.22■□□□□ 0.83
PHGDH-230ENST00000641927 JMJD4Q9H9V9 463 aa20.22■□□□□ 0.83
PHGDH-230ENST00000641927 RBM27Q9P2N5 1060 aaKnown RBP20.22■□□□□ 0.83
PHGDH-230ENST00000641927 PRR12Q9ULL5 1215 aa20.22■□□□□ 0.83
PHGDH-230ENST00000641927 BAZ2BQ9UIF8 2168 aaKnown RBP20.22■□□□□ 0.83
PHGDH-230ENST00000641927 PTPRFP10586 1907 aa20.22■□□□□ 0.83
PHGDH-230ENST00000641927 USP17L15C9J2P7 530 aa20.22■□□□□ 0.83
PHGDH-230ENST00000641927 USP17L13C9JLJ4 530 aa20.22■□□□□ 0.83
PHGDH-230ENST00000641927 USP17L11C9JVI0 530 aa20.22■□□□□ 0.83
PHGDH-230ENST00000641927 USP17L18D6R9N7 530 aa20.22■□□□□ 0.83
PHGDH-230ENST00000641927 USP17L22D6RA61 530 aa20.22■□□□□ 0.83
PHGDH-230ENST00000641927 USP17L17D6RBQ6 530 aa20.22■□□□□ 0.83
PHGDH-230ENST00000641927 USP17L19D6RCP7 530 aa20.22■□□□□ 0.83
PHGDH-230ENST00000641927 USP17L20D6RJB6 530 aa20.22■□□□□ 0.83
PHGDH-230ENST00000641927 CETPP11597 493 aa20.22■□□□□ 0.83
PHGDH-230ENST00000641927 USP17L24Q0WX57 530 aa20.22■□□□□ 0.83
PHGDH-230ENST00000641927 GRM1Q13255 1194 aa20.22■□□□□ 0.83
PHGDH-230ENST00000641927 ALG1Q9BT22 464 aa20.22■□□□□ 0.83
PHGDH-230ENST00000641927 CCL15-CCL14A0A0B4J2E2 113 aa20.21■□□□□ 0.83
PHGDH-230ENST00000641927 PLA2G6O60733 806 aa20.21■□□□□ 0.83
PHGDH-230ENST00000641927 APLP1P51693 650 aa20.21■□□□□ 0.83
PHGDH-230ENST00000641927 SNAP25P60880 206 aa20.21■□□□□ 0.83
PHGDH-230ENST00000641927 CCL15Q16663 113 aa20.21■□□□□ 0.83
PHGDH-230ENST00000641927 LARP1BQ659C4 914 aaKnown RBP20.21■□□□□ 0.83
PHGDH-230ENST00000641927 PRPF38AQ8NAV1 312 aaKnown RBP20.21■□□□□ 0.83
PHGDH-230ENST00000641927 AIFM3Q96NN9 605 aa20.21■□□□□ 0.83
PHGDH-230ENST00000641927 CDC37Q16543 378 aaPredicted RBP20.2■□□□□ 0.82
PHGDH-230ENST00000641927 CATSPERGQ6ZRH7 1159 aa20.2■□□□□ 0.82
PHGDH-230ENST00000641927 AGTPBP1Q9UPW5 1226 aa20.2■□□□□ 0.82
PHGDH-230ENST00000641927 SCG2P13521 617 aa20.19■□□□□ 0.82
PHGDH-230ENST00000641927 PDCP20941 246 aa20.19■□□□□ 0.82
PHGDH-230ENST00000641927 PKN1Q16512 942 aa20.19■□□□□ 0.82
PHGDH-230ENST00000641927 HEATR3Q7Z4Q2 680 aa20.19■□□□□ 0.82
PHGDH-230ENST00000641927 CCDC102AQ96A19 550 aa20.19■□□□□ 0.82
PHGDH-230ENST00000641927 MS4A4AQ96JQ5 239 aa20.19■□□□□ 0.82
PHGDH-230ENST00000641927 CTDP1Q9Y5B0 961 aaPredicted RBP20.19■□□□□ 0.82
PHGDH-230ENST00000641927 LOC285556D6RIA3 1793 aa20.19■□□□□ 0.82
PHGDH-230ENST00000641927 PNMA6FA0A0J9YX94 578 aa20.19■□□□□ 0.82
PHGDH-230ENST00000641927 ZBTB5O15062 677 aa20.19■□□□□ 0.82
PHGDH-230ENST00000641927 SLC10A3P09131 477 aa20.19■□□□□ 0.82
PHGDH-230ENST00000641927 MYH6P13533 1939 aa20.19■□□□□ 0.82
PHGDH-230ENST00000641927 IRX3P78415 501 aaPredicted RBP20.19■□□□□ 0.82
PHGDH-230ENST00000641927 PABPC4Q13310 644 aaKnown RBP eCLIP20.19■□□□□ 0.829e-7■■■■□ 21.6
PHGDH-230ENST00000641927 MOGSQ13724 837 aa20.19■□□□□ 0.82
PHGDH-230ENST00000641927 TRIM29Q14134 588 aa20.19■□□□□ 0.82
PHGDH-230ENST00000641927 COG2Q14746 738 aa20.19■□□□□ 0.82
PHGDH-230ENST00000641927 PFKFB3Q16875 520 aaPredicted RBP20.19■□□□□ 0.82
PHGDH-230ENST00000641927 GPKOWQ92917 476 aaPredicted RBP eCLIP20.19■□□□□ 0.82
PHGDH-230ENST00000641927 C8orf76Q96K31 380 aa20.19■□□□□ 0.82
PHGDH-230ENST00000641927 CREBZFQ9NS37 354 aa20.19■□□□□ 0.82
PHGDH-230ENST00000641927 PPP1R9AQ9ULJ8 1098 aa20.19■□□□□ 0.82
PHGDH-230ENST00000641927 H3BQV1 296 aa20.18■□□□□ 0.82
PHGDH-230ENST00000641927 SYT1P21579 422 aa20.18■□□□□ 0.82
PHGDH-230ENST00000641927 GUCY1B3Q02153 619 aa20.18■□□□□ 0.82
PHGDH-230ENST00000641927 QRICH1Q2TAL8 776 aa20.18■□□□□ 0.82
PHGDH-230ENST00000641927 IFFO2Q5TF58 517 aa20.18■□□□□ 0.82
PHGDH-230ENST00000641927 CCDC174Q6PII3 467 aa20.18■□□□□ 0.82
PHGDH-230ENST00000641927 HHIPL1Q96JK4 782 aa20.18■□□□□ 0.82
PHGDH-230ENST00000641927 VPS37CA5D8V6 355 aaPredicted RBP20.17■□□□□ 0.82
PHGDH-230ENST00000641927 XBP1P17861 261 aa20.17■□□□□ 0.82
PHGDH-230ENST00000641927 HOXA7P31268 230 aaPredicted RBP20.17■□□□□ 0.82
PHGDH-230ENST00000641927 GPAT2Q6NUI2 795 aa20.17■□□□□ 0.82
PHGDH-230ENST00000641927 BRI3BPQ8WY22 251 aa20.17■□□□□ 0.82
PHGDH-230ENST00000641927 ATG4CQ96DT6 458 aa20.17■□□□□ 0.82
PHGDH-230ENST00000641927 MTMR8Q96EF0 704 aa20.17■□□□□ 0.82
PHGDH-230ENST00000641927 GJB4Q9NTQ9 266 aa20.17■□□□□ 0.82
PHGDH-230ENST00000641927 HOXC10Q9NYD6 342 aa20.17■□□□□ 0.82
PHGDH-230ENST00000641927 VPS54Q9P1Q0 977 aa20.17■□□□□ 0.82
PHGDH-230ENST00000641927 OSBPP22059 807 aa20.16■□□□□ 0.82
PHGDH-230ENST00000641927 DSG3P32926 999 aa20.16■□□□□ 0.82
PHGDH-230ENST00000641927 CYP4F22Q6NT55 531 aa20.16■□□□□ 0.82
PHGDH-230ENST00000641927 RANBP17Q9H2T7 1088 aaKnown RBP20.16■□□□□ 0.82
PHGDH-230ENST00000641927 MANSC4A6NHS7 340 aaPredicted RBP20.16■□□□□ 0.82
PHGDH-230ENST00000641927 FAM155AB1AL88 458 aaPredicted RBP20.16■□□□□ 0.82
PHGDH-230ENST00000641927 ZBED4O75132 1171 aa20.16■□□□□ 0.82
PHGDH-230ENST00000641927 DEFB115Q30KQ5 88 aa20.16■□□□□ 0.82
PHGDH-230ENST00000641927 WWC2Q6AWC2 1192 aa20.16■□□□□ 0.82
PHGDH-230ENST00000641927 OTUD7BQ6GQQ9 843 aa20.16■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms