RNA–Protein interactions for RNA: ENST00000640640.1

SCARB2-223, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5 BASIC

Gene SCARB2, Length 4,608 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-223ENST00000640640 IFT74Q96LB3 600 aa19.52■□□□□ 0.72
SCARB2-223ENST00000640640 FNBP4Q8N3X1 1017 aaPredicted RBP19.52■□□□□ 0.72
SCARB2-223ENST00000640640 IKBKBO14920 756 aa19.52■□□□□ 0.72
SCARB2-223ENST00000640640 IGSF3O75054 1194 aa19.52■□□□□ 0.72
SCARB2-223ENST00000640640 CCDC50Q8IVM0 306 aa19.52■□□□□ 0.72
SCARB2-223ENST00000640640 HOOK2Q96ED9 719 aa19.52■□□□□ 0.72
SCARB2-223ENST00000640640 PRPF3O43395 683 aaKnown RBP19.52■□□□□ 0.71
SCARB2-223ENST00000640640 GRAPQ13588 217 aa19.52■□□□□ 0.71
SCARB2-223ENST00000640640 TBC1D10CQ8IV04 446 aa19.52■□□□□ 0.71
SCARB2-223ENST00000640640 GRAPLQ8TC17 118 aaPredicted RBP19.52■□□□□ 0.71
SCARB2-223ENST00000640640 TSC1Q92574 1164 aa19.52■□□□□ 0.71
SCARB2-223ENST00000640640 DDX25Q9UHL0 483 aaKnown RBP19.52■□□□□ 0.71
SCARB2-223ENST00000640640 ZDHHC9Q9Y397 364 aa19.52■□□□□ 0.71
SCARB2-223ENST00000640640 DDX12PQ92771 950 aa19.51■□□□□ 0.71
SCARB2-223ENST00000640640 IQCDQ96DY2 449 aa19.51■□□□□ 0.71
SCARB2-223ENST00000640640 DYNLL2Q96FJ2 89 aa19.51■□□□□ 0.71
SCARB2-223ENST00000640640 EXOC7Q9UPT5 735 aa19.51■□□□□ 0.71
SCARB2-223ENST00000640640 PCDHB13Q9Y5F0 798 aa19.51■□□□□ 0.71
SCARB2-223ENST00000640640 TCP10L2B9ZVM9 353 aa19.51■□□□□ 0.71
SCARB2-223ENST00000640640 SLFN14P0C7P3 912 aa19.51■□□□□ 0.71
SCARB2-223ENST00000640640 RNASE9P60153 205 aaKnown RBP19.51■□□□□ 0.71
SCARB2-223ENST00000640640 GRIPAP1Q4V328 841 aa19.51■□□□□ 0.71
SCARB2-223ENST00000640640 ASPRV1Q53RT3 343 aa19.51■□□□□ 0.71
SCARB2-223ENST00000640640 WDR44Q5JSH3 913 aa19.51■□□□□ 0.71
SCARB2-223ENST00000640640 TYW1BQ6NUM6 668 aa19.51■□□□□ 0.71
SCARB2-223ENST00000640640 C8orf74Q6P047 294 aa19.51■□□□□ 0.71
SCARB2-223ENST00000640640 SLC39A2Q9NP94 309 aa19.51■□□□□ 0.71
SCARB2-223ENST00000640640 RPAP1Q9BWH6 1393 aaPredicted RBP19.51■□□□□ 0.71
SCARB2-223ENST00000640640 CFAP58Q5T655 872 aa19.51■□□□□ 0.71
SCARB2-223ENST00000640640 ATRIPQ8WXE1 791 aa19.51■□□□□ 0.71
SCARB2-223ENST00000640640 FERMT1Q9BQL6 677 aa19.51■□□□□ 0.71
SCARB2-223ENST00000640640 CCDC77Q9BR77 488 aa19.51■□□□□ 0.71
SCARB2-223ENST00000640640 IFIH1Q9BYX4 1025 aaKnown RBP19.51■□□□□ 0.71
SCARB2-223ENST00000640640 NUCKS1Q9H1E3 243 aaKnown RBP19.51■□□□□ 0.71
SCARB2-223ENST00000640640 MTUS1Q9ULD2 1270 aa19.51■□□□□ 0.71
SCARB2-223ENST00000640640 TNFAIP1Q13829 316 aa19.5■□□□□ 0.71
SCARB2-223ENST00000640640 SFMBT2Q5VUG0 894 aa19.5■□□□□ 0.71
SCARB2-223ENST00000640640 PSMB7Q99436 277 aa19.5■□□□□ 0.71
SCARB2-223ENST00000640640 PCDHB6Q9Y5E3 794 aa19.5■□□□□ 0.71
SCARB2-223ENST00000640640 IKBKGQ9Y6K9 419 aa19.5■□□□□ 0.71
SCARB2-223ENST00000640640 TMEM232C9JQI7 657 aa19.5■□□□□ 0.71
SCARB2-223ENST00000640640 KRT5P13647 590 aa19.5■□□□□ 0.71
SCARB2-223ENST00000640640 NCBP1Q09161 790 aaKnown RBP19.5■□□□□ 0.71
SCARB2-223ENST00000640640 DPH6Q7L8W6 267 aa19.5■□□□□ 0.71
SCARB2-223ENST00000640640 BCL2L12Q9HB09 334 aa19.5■□□□□ 0.71
SCARB2-223ENST00000640640 BAG6P46379 1132 aa19.5■□□□□ 0.71
SCARB2-223ENST00000640640 ABCB5Q2M3G0 1257 aa19.5■□□□□ 0.71
SCARB2-223ENST00000640640 GSTA5Q7RTV2 222 aa19.5■□□□□ 0.71
SCARB2-223ENST00000640640 MINPP1Q9UNW1 487 aa19.5■□□□□ 0.71
SCARB2-223ENST00000640640 PPP2R2CQ9Y2T4 447 aa19.5■□□□□ 0.71
SCARB2-223ENST00000640640 ZC3H13Q5T200 1668 aaKnown RBP19.5■□□□□ 0.71
SCARB2-223ENST00000640640 LAD1O00515 517 aa19.5■□□□□ 0.71
SCARB2-223ENST00000640640 FLOT1O75955 427 aa19.5■□□□□ 0.71
SCARB2-223ENST00000640640 BRIP1Q9BX63 1249 aa19.5■□□□□ 0.71
SCARB2-223ENST00000640640 SPOPO43791 374 aa19.49■□□□□ 0.71
SCARB2-223ENST00000640640 TTLL1O95922 423 aa19.49■□□□□ 0.71
SCARB2-223ENST00000640640 PRKG1Q13976 671 aa19.49■□□□□ 0.71
SCARB2-223ENST00000640640 FAM26FQ5R3K3 315 aa19.49■□□□□ 0.71
SCARB2-223ENST00000640640 CACTINQ8WUQ7 758 aaKnown RBP19.49■□□□□ 0.71
SCARB2-223ENST00000640640 NARFQ9UHQ1 456 aa19.49■□□□□ 0.71
SCARB2-223ENST00000640640 GNA14O95837 355 aa19.49■□□□□ 0.71
SCARB2-223ENST00000640640 PRDX5P30044 214 aa19.49■□□□□ 0.71
SCARB2-223ENST00000640640 ATG9AQ7Z3C6 839 aa19.49■□□□□ 0.71
SCARB2-223ENST00000640640 SLFN12Q8IYM2 578 aa19.49■□□□□ 0.71
SCARB2-223ENST00000640640 GRAMD1CQ8IYS0 662 aa19.49■□□□□ 0.71
SCARB2-223ENST00000640640 STAG1Q8WVM7 1258 aa19.49■□□□□ 0.71
SCARB2-223ENST00000640640 KIFAP3Q92845 792 aa19.49■□□□□ 0.71
SCARB2-223ENST00000640640 SWAP70Q9UH65 585 aa19.49■□□□□ 0.71
SCARB2-223ENST00000640640 SCARF1Q14162 830 aa19.49■□□□□ 0.71
SCARB2-223ENST00000640640 UTP14CQ5TAP6 766 aaKnown RBP19.49■□□□□ 0.71
SCARB2-223ENST00000640640 AMNQ9BXJ7 453 aa19.49■□□□□ 0.71
SCARB2-223ENST00000640640 CDC25AP30304 524 aa19.48■□□□□ 0.71
SCARB2-223ENST00000640640 TLDC2A0PJX2 215 aa19.48■□□□□ 0.71
SCARB2-223ENST00000640640 STX10O60499 249 aa19.48■□□□□ 0.71
SCARB2-223ENST00000640640 XRCC5P13010 732 aaKnown RBP19.48■□□□□ 0.71
SCARB2-223ENST00000640640 DNAJC21Q5F1R6 531 aaKnown RBP19.48■□□□□ 0.71
SCARB2-223ENST00000640640 DBNDD1Q9H9R9 158 aa19.48■□□□□ 0.71
SCARB2-223ENST00000640640 MTRF1LQ9UGC7 380 aaKnown RBP19.48■□□□□ 0.71
SCARB2-223ENST00000640640 ZNF215Q9UL58 517 aaPredicted RBP19.48■□□□□ 0.71
SCARB2-223ENST00000640640 SRPRBQ9Y5M8 271 aaKnown RBP19.48■□□□□ 0.71
SCARB2-223ENST00000640640 USP17L2Q6R6M4 530 aa19.48■□□□□ 0.71
SCARB2-223ENST00000640640 CLEC17AQ6ZS10 378 aa19.48■□□□□ 0.71
SCARB2-223ENST00000640640 ARFGAP2Q8N6H7 521 aa19.48■□□□□ 0.71
SCARB2-223ENST00000640640 CCDC26Q8TAB7 109 aa19.48■□□□□ 0.71
SCARB2-223ENST00000640640 CELF1Q92879 486 aaKnown RBP19.48■□□□□ 0.71
SCARB2-223ENST00000640640 INCENPQ9NQS7 918 aa19.48■□□□□ 0.71
SCARB2-223ENST00000640640 RDH13Q8NBN7 331 aa19.48■□□□□ 0.71
SCARB2-223ENST00000640640 CUEDC2Q9H467 287 aa19.48■□□□□ 0.71
SCARB2-223ENST00000640640 ARMCX3Q9UH62 379 aaPredicted RBP19.48■□□□□ 0.71
SCARB2-223ENST00000640640 RSPH14Q9UHP6 348 aa19.48■□□□□ 0.71
SCARB2-223ENST00000640640 MRPL11Q9Y3B7 192 aaKnown RBP19.48■□□□□ 0.71
SCARB2-223ENST00000640640 USP42Q9H9J4 1324 aaKnown RBP19.48■□□□□ 0.71
SCARB2-223ENST00000640640 CALCOCO2Q13137 446 aa19.47■□□□□ 0.71
SCARB2-223ENST00000640640 TSGA10IPQ3SY00 556 aa19.47■□□□□ 0.71
SCARB2-223ENST00000640640 SEL1L2Q5TEA6 688 aa19.47■□□□□ 0.71
SCARB2-223ENST00000640640 DGKHQ86XP1 1220 aa19.47■□□□□ 0.71
SCARB2-223ENST00000640640 MB21D2Q8IYB1 491 aaPredicted RBP19.47■□□□□ 0.71
SCARB2-223ENST00000640640 SMYD4Q8IYR2 804 aaPredicted RBP19.47■□□□□ 0.71
SCARB2-223ENST00000640640 MAGEF1Q9HAY2 307 aa19.47■□□□□ 0.71
SCARB2-223ENST00000640640 COL15A1P39059 1388 aa19.47■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms