RNA–Protein interactions for RNA: ENST00000640634.1

SCARB2-222, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 1,734 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-222ENST00000640634 ANKRD13CQ8N6S4 541 aa12.82□□□□□ -0.36
SCARB2-222ENST00000640634 GMCL1Q96IK5 515 aa12.82□□□□□ -0.36
SCARB2-222ENST00000640634 KIF2CQ99661 725 aa12.82□□□□□ -0.36
SCARB2-222ENST00000640634 PAGR1Q9BTK6 254 aa12.82□□□□□ -0.36
SCARB2-222ENST00000640634 ARHGAP39Q9C0H5 1083 aa12.82□□□□□ -0.36
SCARB2-222ENST00000640634 ZFYVE28Q9HCC9 887 aa12.82□□□□□ -0.36
SCARB2-222ENST00000640634 SAGE1Q9NXZ1 904 aa12.82□□□□□ -0.36
SCARB2-222ENST00000640634 BRPF3Q9ULD4 1205 aa12.82□□□□□ -0.36
SCARB2-222ENST00000640634 SLC45A1Q9Y2W3 748 aa12.82□□□□□ -0.36
SCARB2-222ENST00000640634 COL11A1P12107 1806 aaPredicted RBP12.81□□□□□ -0.36
SCARB2-222ENST00000640634 CNMDO75829 334 aa12.81□□□□□ -0.36
SCARB2-222ENST00000640634 ALDH1A1P00352 501 aa12.81□□□□□ -0.36
SCARB2-222ENST00000640634 SNHG28P0DPA3 235 aa12.81□□□□□ -0.36
SCARB2-222ENST00000640634 SLC35G1Q2M3R5 365 aa12.81□□□□□ -0.36
SCARB2-222ENST00000640634 C17orf99Q6UX52 265 aa12.81□□□□□ -0.36
SCARB2-222ENST00000640634 Q6ZUG5 572 aa12.81□□□□□ -0.36
SCARB2-222ENST00000640634 CCDC144CPQ8IYA2 1237 aa12.81□□□□□ -0.36
SCARB2-222ENST00000640634 STAG2Q8N3U4 1231 aa12.81□□□□□ -0.36
SCARB2-222ENST00000640634 ZNF296Q8WUU4 475 aaPredicted RBP12.81□□□□□ -0.36
SCARB2-222ENST00000640634 KIFC2Q96AC6 838 aa12.81□□□□□ -0.36
SCARB2-222ENST00000640634 ZSWIM6Q9HCJ5 1215 aa12.81□□□□□ -0.36
SCARB2-222ENST00000640634 BTBD7Q9P203 1132 aa12.81□□□□□ -0.36
SCARB2-222ENST00000640634 RBPJLQ9UBG7 517 aa12.81□□□□□ -0.36
SCARB2-222ENST00000640634 STK24Q9Y6E0 443 aa12.81□□□□□ -0.36
SCARB2-222ENST00000640634 ERICH2A1L162 156 aa12.8□□□□□ -0.36
SCARB2-222ENST00000640634 GPR25O00155 361 aa12.8□□□□□ -0.36
SCARB2-222ENST00000640634 BCRP11274 1271 aa12.8□□□□□ -0.36
SCARB2-222ENST00000640634 OSBPP22059 807 aa12.8□□□□□ -0.36
SCARB2-222ENST00000640634 CFHR5Q9BXR6 569 aa12.8□□□□□ -0.36
SCARB2-222ENST00000640634 C22orf23Q9BZE7 217 aa12.8□□□□□ -0.36
SCARB2-222ENST00000640634 ZCCHC17Q9NP64 241 aaKnown RBP12.8□□□□□ -0.36
SCARB2-222ENST00000640634 SYNPO2Q9UMS6 1093 aa12.8□□□□□ -0.36
SCARB2-222ENST00000640634 DTNBO60941 627 aa12.79□□□□□ -0.36
SCARB2-222ENST00000640634 DSG3P32926 999 aa12.79□□□□□ -0.36
SCARB2-222ENST00000640634 ZNF543Q08ER8 600 aa12.79□□□□□ -0.36
SCARB2-222ENST00000640634 APOBRQ0VD83 1088 aa12.79□□□□□ -0.36
SCARB2-222ENST00000640634 TROAPQ12815 778 aa12.79□□□□□ -0.36
SCARB2-222ENST00000640634 PABPC4Q13310 644 aaKnown RBP eCLIP12.79□□□□□ -0.36
SCARB2-222ENST00000640634 TOB2Q14106 344 aaPredicted RBP12.79□□□□□ -0.36
SCARB2-222ENST00000640634 COG2Q14746 738 aa12.79□□□□□ -0.36
SCARB2-222ENST00000640634 SART3Q15020 963 aaKnown RBP12.79□□□□□ -0.36
SCARB2-222ENST00000640634 Q3C1V9 767 aa12.79□□□□□ -0.36
SCARB2-222ENST00000640634 NFXL1Q6ZNB6 911 aa12.79□□□□□ -0.36
SCARB2-222ENST00000640634 RUFY3Q7L099 469 aa12.79□□□□□ -0.36
SCARB2-222ENST00000640634 ZNF654Q8IZM8 581 aa12.79□□□□□ -0.36
SCARB2-222ENST00000640634 NUP133Q8WUM0 1156 aa12.79□□□□□ -0.36
SCARB2-222ENST00000640634 BRF1Q92994 677 aa12.79□□□□□ -0.36
SCARB2-222ENST00000640634 TMEM87BQ96K49 555 aa12.79□□□□□ -0.36
SCARB2-222ENST00000640634 SLF1Q9BQI6 1058 aa12.79□□□□□ -0.36
SCARB2-222ENST00000640634 UBA5Q9GZZ9 404 aa12.79□□□□□ -0.36
SCARB2-222ENST00000640634 PNMA3Q9UL41 463 aa12.79□□□□□ -0.36
SCARB2-222ENST00000640634 PPP1R9AQ9ULJ8 1098 aa12.79□□□□□ -0.36
SCARB2-222ENST00000640634 CASP8AP2Q9UKL3 1982 aa12.79□□□□□ -0.36
SCARB2-222ENST00000640634 NT5C2P49902 561 aa12.79□□□□□ -0.36
SCARB2-222ENST00000640634 PDE4CQ08493 712 aa12.79□□□□□ -0.36
SCARB2-222ENST00000640634 IKQ13123 557 aaPredicted RBP12.79□□□□□ -0.36
SCARB2-222ENST00000640634 CCDC178Q5BJE1 867 aa12.79□□□□□ -0.36
SCARB2-222ENST00000640634 PPP4R3BQ5MIZ7 849 aa12.79□□□□□ -0.36
SCARB2-222ENST00000640634 NBPF11Q86T75 865 aa12.79□□□□□ -0.36
SCARB2-222ENST00000640634 MICU3Q86XE3 530 aa12.79□□□□□ -0.36
SCARB2-222ENST00000640634 CMTR1Q8N1G2 835 aaKnown RBP12.79□□□□□ -0.36
SCARB2-222ENST00000640634 CD99L2Q8TCZ2 262 aa12.79□□□□□ -0.36
SCARB2-222ENST00000640634 DCAF4Q8WV16 495 aa12.79□□□□□ -0.36
SCARB2-222ENST00000640634 PORCNQ9H237 461 aa12.79□□□□□ -0.36
SCARB2-222ENST00000640634 MAD2L2Q9UI95 211 aa12.79□□□□□ -0.36
SCARB2-222ENST00000640634 WDR19Q8NEZ3 1342 aa12.78□□□□□ -0.36
SCARB2-222ENST00000640634 VWA5AO00534 786 aa12.78□□□□□ -0.36
SCARB2-222ENST00000640634 STAT2P52630 851 aa12.78□□□□□ -0.36
SCARB2-222ENST00000640634 ANAPC15P60006 121 aa12.78□□□□□ -0.36
SCARB2-222ENST00000640634 TMEM132BQ14DG7 1078 aa12.78□□□□□ -0.36
SCARB2-222ENST00000640634 NOL8Q76FK4 1167 aaKnown RBP12.78□□□□□ -0.36
SCARB2-222ENST00000640634 REPS2Q8NFH8 660 aa12.78□□□□□ -0.36
SCARB2-222ENST00000640634 PRR12Q9ULL5 1215 aa12.78□□□□□ -0.36
SCARB2-222ENST00000640634 CYP46A1Q9Y6A2 500 aa12.78□□□□□ -0.36
SCARB2-222ENST00000640634 BRCA2P51587 3418 aa12.78□□□□□ -0.36
SCARB2-222ENST00000640634 KLF18A0A0U1RQI7 1052 aa12.77□□□□□ -0.36
SCARB2-222ENST00000640634 CCDC69A6NI79 296 aa12.77□□□□□ -0.36
SCARB2-222ENST00000640634 PLEKHA8P1O95397 391 aa12.77□□□□□ -0.36
SCARB2-222ENST00000640634 PSMA5P28066 241 aa12.77□□□□□ -0.36
SCARB2-222ENST00000640634 LIFRP42702 1097 aa12.77□□□□□ -0.36
SCARB2-222ENST00000640634 CTCFP49711 727 aaPredicted RBP12.77□□□□□ -0.36
SCARB2-222ENST00000640634 GRM4Q14833 912 aa12.77□□□□□ -0.36
SCARB2-222ENST00000640634 E2F4Q16254 413 aa12.77□□□□□ -0.36
SCARB2-222ENST00000640634 APOA5Q6Q788 366 aa12.77□□□□□ -0.36
SCARB2-222ENST00000640634 LBX2Q6XYB7 198 aa12.77□□□□□ -0.36
SCARB2-222ENST00000640634 SGMS1Q86VZ5 419 aa12.77□□□□□ -0.36
SCARB2-222ENST00000640634 IL17RAQ96F46 866 aa12.77□□□□□ -0.36
SCARB2-222ENST00000640634 TM6SF1Q9BZW5 370 aa12.77□□□□□ -0.36
SCARB2-222ENST00000640634 NAP1L2Q9ULW6 460 aaPredicted RBP12.77□□□□□ -0.36
SCARB2-222ENST00000640634 PPFIA3O75145 1194 aa12.76□□□□□ -0.37
SCARB2-222ENST00000640634 PARP1P09874 1014 aaKnown RBP12.76□□□□□ -0.37
SCARB2-222ENST00000640634 SLC4A3P48751 1232 aa12.76□□□□□ -0.37
SCARB2-222ENST00000640634 ERVK-9P63128 1117 aa12.76□□□□□ -0.37
SCARB2-222ENST00000640634 ERVK-24P63145 666 aa12.76□□□□□ -0.37
SCARB2-222ENST00000640634 FGD1P98174 961 aa12.76□□□□□ -0.37
SCARB2-222ENST00000640634 SP3Q02447 781 aa12.76□□□□□ -0.37
SCARB2-222ENST00000640634 PLS1Q14651 629 aa12.76□□□□□ -0.37
SCARB2-222ENST00000640634 FAM110CQ1W6H9 321 aa12.76□□□□□ -0.37
SCARB2-222ENST00000640634 SYDE2Q5VT97 1194 aa12.76□□□□□ -0.37
SCARB2-222ENST00000640634 CCDC174Q6PII3 467 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms