RNA–Protein interactions for RNA: ENST00000640306.1

HNRNPU-228, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 5

Gene HNRNPU, Length 2,917 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-228ENST00000640306 SIK1P57059 783 aa18.64■□□□□ 0.58
HNRNPU-228ENST00000640306 IRX5P78411 483 aaPredicted RBP18.64■□□□□ 0.58
HNRNPU-228ENST00000640306 MECOMQ03112 1051 aa18.64■□□□□ 0.58
HNRNPU-228ENST00000640306 CYP26C1Q6V0L0 522 aa18.64■□□□□ 0.58
HNRNPU-228ENST00000640306 CTAGE6Q86UF2 777 aa18.64■□□□□ 0.58
HNRNPU-228ENST00000640306 CTAGE4Q8IX94 777 aa18.64■□□□□ 0.58
HNRNPU-228ENST00000640306 STAG2Q8N3U4 1231 aa18.64■□□□□ 0.58
HNRNPU-228ENST00000640306 ANKRD20A12PQ8NF67 263 aa18.64■□□□□ 0.58
HNRNPU-228ENST00000640306 LIMA1Q9UHB6 759 aaKnown RBP18.64■□□□□ 0.58
HNRNPU-228ENST00000640306 RWDD2AQ9UIY3 292 aa18.64■□□□□ 0.58
HNRNPU-228ENST00000640306 BRD3Q15059 726 aa18.64■□□□□ 0.57
HNRNPU-228ENST00000640306 LRP5O75197 1615 aa18.64■□□□□ 0.57
HNRNPU-228ENST00000640306 TAF1P21675 1872 aa18.64■□□□□ 0.57
HNRNPU-228ENST00000640306 PARP10Q53GL7 1025 aa18.63■□□□□ 0.57
HNRNPU-228ENST00000640306 CAPZA3Q96KX2 299 aa18.63■□□□□ 0.57
HNRNPU-228ENST00000640306 GDAP1L1Q96MZ0 367 aa18.63■□□□□ 0.57
HNRNPU-228ENST00000640306 DCP1AQ9NPI6 582 aaPredicted RBP18.63■□□□□ 0.57
HNRNPU-228ENST00000640306 CICQ96RK0 1608 aaPredicted RBP18.63■□□□□ 0.57
HNRNPU-228ENST00000640306 PARP1P09874 1014 aaKnown RBP18.63■□□□□ 0.57
HNRNPU-228ENST00000640306 USP17L8P0C7I0 530 aa18.63■□□□□ 0.57
HNRNPU-228ENST00000640306 CALM1P0DP23 149 aa18.63■□□□□ 0.57
HNRNPU-228ENST00000640306 CALM2P0DP24 149 aa18.63■□□□□ 0.57
HNRNPU-228ENST00000640306 CALM3P0DP25 149 aa18.63■□□□□ 0.57
HNRNPU-228ENST00000640306 ZNF658Q5TYW1 1059 aaPredicted RBP18.63■□□□□ 0.57
HNRNPU-228ENST00000640306 BARGINQ6ZT62 677 aa18.63■□□□□ 0.57
HNRNPU-228ENST00000640306 BRIP1Q9BX63 1249 aa18.63■□□□□ 0.57
HNRNPU-228ENST00000640306 CPVLQ9H3G5 476 aa18.63■□□□□ 0.57
HNRNPU-228ENST00000640306 MINPP1Q9UNW1 487 aa18.63■□□□□ 0.57
HNRNPU-228ENST00000640306 REXO2Q9Y3B8 237 aaKnown RBP18.63■□□□□ 0.57
HNRNPU-228ENST00000640306 ZNF804BA4D1E1 1349 aa18.63■□□□□ 0.57
HNRNPU-228ENST00000640306 SEMA3EO15041 775 aa18.63■□□□□ 0.57
HNRNPU-228ENST00000640306 DDAH1O94760 285 aa18.63■□□□□ 0.57
HNRNPU-228ENST00000640306 MEX3CQ5U5Q3 659 aaKnown RBP18.63■□□□□ 0.57
HNRNPU-228ENST00000640306 TYW1BQ6NUM6 668 aa18.63■□□□□ 0.57
HNRNPU-228ENST00000640306 IRF2BP1Q8IU81 584 aa18.63■□□□□ 0.57
HNRNPU-228ENST00000640306 CCDC102AQ96A19 550 aa18.63■□□□□ 0.57
HNRNPU-228ENST00000640306 TMEM60Q9H2L4 133 aa18.63■□□□□ 0.57
HNRNPU-228ENST00000640306 BCORQ6W2J9 1755 aa18.62■□□□□ 0.57
HNRNPU-228ENST00000640306 MAP2K7O14733 419 aa18.62■□□□□ 0.57
HNRNPU-228ENST00000640306 GPS2Q13227 327 aa18.62■□□□□ 0.57
HNRNPU-228ENST00000640306 SLC51AQ86UW1 340 aa18.62■□□□□ 0.57
HNRNPU-228ENST00000640306 DYNLL2Q96FJ2 89 aa18.62■□□□□ 0.57
HNRNPU-228ENST00000640306 MCM9Q9NXL9 1143 aa18.62■□□□□ 0.57
HNRNPU-228ENST00000640306 EPN1Q9Y6I3 576 aaPredicted RBP18.62■□□□□ 0.57
HNRNPU-228ENST00000640306 DOT1LQ8TEK3 1739 aa18.62■□□□□ 0.57
HNRNPU-228ENST00000640306 ZMYND10O75800 440 aa18.62■□□□□ 0.57
HNRNPU-228ENST00000640306 KLK7P49862 253 aa18.62■□□□□ 0.57
HNRNPU-228ENST00000640306 PFKFB3Q16875 520 aaPredicted RBP18.62■□□□□ 0.57
HNRNPU-228ENST00000640306 NSUN4Q96CB9 384 aaKnown RBP18.62■□□□□ 0.57
HNRNPU-228ENST00000640306 TRIM47Q96LD4 638 aa18.62■□□□□ 0.57
HNRNPU-228ENST00000640306 MYO6Q9UM54 1294 aa18.62■□□□□ 0.57
HNRNPU-228ENST00000640306 ITIH6Q6UXX5 1313 aa18.62■□□□□ 0.57
HNRNPU-228ENST00000640306 NDUFA10O95299 355 aa18.61■□□□□ 0.57
HNRNPU-228ENST00000640306 INF2Q27J81 1249 aa18.61■□□□□ 0.57
HNRNPU-228ENST00000640306 CT47A1Q5JQC4 288 aaPredicted RBP18.61■□□□□ 0.57
HNRNPU-228ENST00000640306 TXLNBQ8N3L3 684 aa18.61■□□□□ 0.57
HNRNPU-228ENST00000640306 CCDC51Q96ER9 411 aa18.61■□□□□ 0.57
HNRNPU-228ENST00000640306 FAN1Q9Y2M0 1017 aa18.61■□□□□ 0.57
HNRNPU-228ENST00000640306 VPS72Q15906 364 aa18.61■□□□□ 0.57
HNRNPU-228ENST00000640306 ZSCAN26Q16670 478 aa18.61■□□□□ 0.57
HNRNPU-228ENST00000640306 HDXQ7Z353 690 aa18.61■□□□□ 0.57
HNRNPU-228ENST00000640306 BLIDQ8IZY5 108 aa18.61■□□□□ 0.57
HNRNPU-228ENST00000640306 DUOX1Q9NRD9 1551 aa18.61■□□□□ 0.57
HNRNPU-228ENST00000640306 LRRC10BA6NIK2 292 aa18.6■□□□□ 0.57
HNRNPU-228ENST00000640306 WNK3Q9BYP7 1800 aa18.6■□□□□ 0.57
HNRNPU-228ENST00000640306 B4DLN1 442 aa18.6■□□□□ 0.57
HNRNPU-228ENST00000640306 ERCC3P19447 782 aa18.6■□□□□ 0.57
HNRNPU-228ENST00000640306 FAM193AP78312 1265 aa18.6■□□□□ 0.57
HNRNPU-228ENST00000640306 TFAP4Q01664 338 aa18.6■□□□□ 0.57
HNRNPU-228ENST00000640306 SPAG1Q07617 926 aa18.6■□□□□ 0.57
HNRNPU-228ENST00000640306 RAD51AP2Q09MP3 1159 aa18.6■□□□□ 0.57
HNRNPU-228ENST00000640306 ARAP2Q8WZ64 1704 aa18.6■□□□□ 0.57
HNRNPU-228ENST00000640306 L1RE1Q9UN81 338 aa18.6■□□□□ 0.57
HNRNPU-228ENST00000640306 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.6■□□□□ 0.573e-7■□□□□ 10.1
HNRNPU-228ENST00000640306 ERLIN1O75477 346 aa18.6■□□□□ 0.57
HNRNPU-228ENST00000640306 GOLGA8HP0CJ92 632 aa18.6■□□□□ 0.57
HNRNPU-228ENST00000640306 CAPN2P17655 700 aa18.6■□□□□ 0.57
HNRNPU-228ENST00000640306 NAALADL2Q58DX5 795 aa18.6■□□□□ 0.57
HNRNPU-228ENST00000640306 RCSD1Q6JBY9 416 aa18.6■□□□□ 0.57
HNRNPU-228ENST00000640306 HEATR3Q7Z4Q2 680 aa18.6■□□□□ 0.57
HNRNPU-228ENST00000640306 FNBP4Q8N3X1 1017 aaPredicted RBP18.6■□□□□ 0.57
HNRNPU-228ENST00000640306 MSANTD4Q8NCY6 345 aa18.6■□□□□ 0.57
HNRNPU-228ENST00000640306 PCMTD1Q96MG8 357 aaPredicted RBP18.6■□□□□ 0.57
HNRNPU-228ENST00000640306 CRNKL1Q9BZJ0 848 aaKnown RBP18.6■□□□□ 0.57
HNRNPU-228ENST00000640306 KAT14Q9H8E8 782 aa18.6■□□□□ 0.57
HNRNPU-228ENST00000640306 DISC1Q9NRI5 854 aa18.6■□□□□ 0.57
HNRNPU-228ENST00000640306 AGPAT5Q9NUQ2 364 aa18.6■□□□□ 0.57
HNRNPU-228ENST00000640306 LUC7L2Q9Y383 392 aaKnown RBP18.6■□□□□ 0.57
HNRNPU-228ENST00000640306 CCDC194A0A1B0GVG4 234 aa18.59■□□□□ 0.57
HNRNPU-228ENST00000640306 USP17L3A6NCW0 530 aa18.59■□□□□ 0.57
HNRNPU-228ENST00000640306 USP17L4A6NCW7 530 aa18.59■□□□□ 0.57
HNRNPU-228ENST00000640306 NKRFO15226 690 aaKnown RBP eCLIP18.59■□□□□ 0.573e-9■□□□□ 9
HNRNPU-228ENST00000640306 ATP1A1P05023 1023 aaKnown RBP18.59■□□□□ 0.57
HNRNPU-228ENST00000640306 UBE4AQ14139 1066 aa18.59■□□□□ 0.57
HNRNPU-228ENST00000640306 CCDC122Q5T0U0 273 aa18.59■□□□□ 0.57
HNRNPU-228ENST00000640306 USP17L1Q7RTZ2 530 aa18.59■□□□□ 0.57
HNRNPU-228ENST00000640306 LRRC15Q8TF66 581 aa18.59■□□□□ 0.57
HNRNPU-228ENST00000640306 EP400Q96L91 3159 aa18.59■□□□□ 0.57
HNRNPU-228ENST00000640306 UBA7P41226 1012 aa18.59■□□□□ 0.57
HNRNPU-228ENST00000640306 CASP8Q14790 479 aa18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms