RNA–Protein interactions for RNA: ENST00000638475.1

HNRNPU-214, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 5

Gene HNRNPU, Length 2,698 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-214ENST00000638475 TMTC2Q8N394 836 aa17.24■□□□□ 0.35
HNRNPU-214ENST00000638475 DEFB129Q9H1M3 183 aa17.24■□□□□ 0.35
HNRNPU-214ENST00000638475 GOLGA8BA8MQT2 603 aa17.24■□□□□ 0.35
HNRNPU-214ENST00000638475 AKR1B1P15121 316 aa17.24■□□□□ 0.35
HNRNPU-214ENST00000638475 TNFAIP1Q13829 316 aa17.24■□□□□ 0.35
HNRNPU-214ENST00000638475 FOXR1Q6PIV2 292 aa17.24■□□□□ 0.35
HNRNPU-214ENST00000638475 APOA5Q6Q788 366 aa17.24■□□□□ 0.35
HNRNPU-214ENST00000638475 MICU3Q86XE3 530 aa17.24■□□□□ 0.35
HNRNPU-214ENST00000638475 MTA3Q9BTC8 594 aa17.24■□□□□ 0.35
HNRNPU-214ENST00000638475 ADARB2Q9NS39 739 aaKnown RBP17.24■□□□□ 0.35
HNRNPU-214ENST00000638475 STX8Q9UNK0 236 aa17.24■□□□□ 0.35
HNRNPU-214ENST00000638475 MPHOSPH10O00566 681 aaKnown RBP17.24■□□□□ 0.35
HNRNPU-214ENST00000638475 PFKFB2O60825 505 aa17.24■□□□□ 0.35
HNRNPU-214ENST00000638475 CCDC192P0DO97 292 aa17.24■□□□□ 0.35
HNRNPU-214ENST00000638475 ACTN2P35609 894 aa17.24■□□□□ 0.35
HNRNPU-214ENST00000638475 SEMA3FQ13275 785 aa17.24■□□□□ 0.35
HNRNPU-214ENST00000638475 NBPF20Q3BBV1 942 aa17.24■□□□□ 0.35
HNRNPU-214ENST00000638475 SWT1Q5T5J6 900 aaKnown RBP17.24■□□□□ 0.35
HNRNPU-214ENST00000638475 PRAMEF18Q5VWM3 479 aa17.24■□□□□ 0.35
HNRNPU-214ENST00000638475 FAM200AQ8TCP9 573 aa17.24■□□□□ 0.35
HNRNPU-214ENST00000638475 INTS4Q96HW7 963 aaKnown RBP17.24■□□□□ 0.35
HNRNPU-214ENST00000638475 HPS5Q9UPZ3 1129 aa17.24■□□□□ 0.35
HNRNPU-214ENST00000638475 PPP2R5AQ15172 486 aa17.23■□□□□ 0.35
HNRNPU-214ENST00000638475 CERKLQ49MI3 558 aaPredicted RBP17.23■□□□□ 0.35
HNRNPU-214ENST00000638475 RCSD1Q6JBY9 416 aa17.23■□□□□ 0.35
HNRNPU-214ENST00000638475 NEDD1Q8NHV4 660 aa17.23■□□□□ 0.35
HNRNPU-214ENST00000638475 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.23■□□□□ 0.35
HNRNPU-214ENST00000638475 GGA3Q9NZ52 723 aa17.23■□□□□ 0.35
HNRNPU-214ENST00000638475 SASH3O75995 380 aa17.23■□□□□ 0.35
HNRNPU-214ENST00000638475 SHROOM1Q2M3G4 852 aaPredicted RBP17.23■□□□□ 0.35
HNRNPU-214ENST00000638475 SYNE3Q6ZMZ3 975 aa17.23■□□□□ 0.35
HNRNPU-214ENST00000638475 SUGP1Q8IWZ8 645 aaKnown RBP17.23■□□□□ 0.35
HNRNPU-214ENST00000638475 CLIP2Q9UDT6 1046 aa17.23■□□□□ 0.35
HNRNPU-214ENST00000638475 ZBTB43O43298 467 aa17.22■□□□□ 0.35
HNRNPU-214ENST00000638475 ZNF75DP51815 510 aa17.22■□□□□ 0.35
HNRNPU-214ENST00000638475 SMC1AQ14683 1233 aaKnown RBP17.22■□□□□ 0.35
HNRNPU-214ENST00000638475 METTL16Q86W50 562 aaKnown RBP17.22■□□□□ 0.35
HNRNPU-214ENST00000638475 TMEM87AQ8NBN3 555 aa17.22■□□□□ 0.35
HNRNPU-214ENST00000638475 NUP133Q8WUM0 1156 aa17.22■□□□□ 0.35
HNRNPU-214ENST00000638475 PPM1EQ8WY54 764 aa17.22■□□□□ 0.35
HNRNPU-214ENST00000638475 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.22■□□□□ 0.351e-13■□□□□ 10.1
HNRNPU-214ENST00000638475 PGAP2Q9UHJ9 254 aa17.22■□□□□ 0.35
HNRNPU-214ENST00000638475 ADAM21Q9UKJ8 722 aa17.22■□□□□ 0.35
HNRNPU-214ENST00000638475 ADD1P35611 737 aaKnown RBP17.22■□□□□ 0.35
HNRNPU-214ENST00000638475 LRCH2Q5VUJ6 765 aa17.22■□□□□ 0.35
HNRNPU-214ENST00000638475 TATDN1Q6P1N9 297 aa17.22■□□□□ 0.35
HNRNPU-214ENST00000638475 CEP95Q96GE4 821 aa17.22■□□□□ 0.35
HNRNPU-214ENST00000638475 UBXN6Q9BZV1 441 aa17.22■□□□□ 0.35
HNRNPU-214ENST00000638475 WDR33Q9C0J8 1336 aaKnown RBP17.21■□□□□ 0.35
HNRNPU-214ENST00000638475 CLEC10AQ8IUN9 316 aa17.21■□□□□ 0.35
HNRNPU-214ENST00000638475 ZNF654Q8IZM8 581 aa17.21■□□□□ 0.35
HNRNPU-214ENST00000638475 L3MBTL3Q96JM7 780 aaPredicted RBP17.21■□□□□ 0.35
HNRNPU-214ENST00000638475 TEPSINQ96N21 525 aa17.21■□□□□ 0.35
HNRNPU-214ENST00000638475 TCP11L1Q9NUJ3 509 aa17.21■□□□□ 0.35
HNRNPU-214ENST00000638475 SMC3Q9UQE7 1217 aa17.21■□□□□ 0.35
HNRNPU-214ENST00000638475 GDF11O95390 407 aa17.21■□□□□ 0.35
HNRNPU-214ENST00000638475 METAP2P50579 478 aaKnown RBP eCLIP17.21■□□□□ 0.358e-11■□□□□ 9.1
HNRNPU-214ENST00000638475 DGKHQ86XP1 1220 aa17.21■□□□□ 0.35
HNRNPU-214ENST00000638475 ARGLU1Q9NWB6 273 aaPredicted RBP17.21■□□□□ 0.35
HNRNPU-214ENST00000638475 HERC5Q9UII4 1024 aaKnown RBP17.21■□□□□ 0.35
HNRNPU-214ENST00000638475 NT5C2P49902 561 aa17.2■□□□□ 0.34
HNRNPU-214ENST00000638475 RRP1BQ14684 758 aaKnown RBP17.2■□□□□ 0.34
HNRNPU-214ENST00000638475 MMS22LQ6ZRQ5 1243 aa17.2■□□□□ 0.34
HNRNPU-214ENST00000638475 MTMR7Q9Y216 660 aa17.2■□□□□ 0.34
HNRNPU-214ENST00000638475 SH3BP1Q9Y3L3 701 aa17.2■□□□□ 0.34
HNRNPU-214ENST00000638475 ZC3H4Q9UPT8 1303 aaKnown RBP17.2■□□□□ 0.34
HNRNPU-214ENST00000638475 CDC27P30260 824 aa17.2■□□□□ 0.34
HNRNPU-214ENST00000638475 EPHX2P34913 555 aa17.2■□□□□ 0.34
HNRNPU-214ENST00000638475 NBPF12Q5TAG4 269 aaPredicted RBP17.2■□□□□ 0.34
HNRNPU-214ENST00000638475 DLK2Q6UY11 383 aa17.2■□□□□ 0.34
HNRNPU-214ENST00000638475 LEKR1Q6ZMV7 388 aa17.2■□□□□ 0.34
HNRNPU-214ENST00000638475 CATIPQ7Z7H3 387 aa17.2■□□□□ 0.34
HNRNPU-214ENST00000638475 PLA2G4DQ86XP0 818 aa17.2■□□□□ 0.34
HNRNPU-214ENST00000638475 LRRC8AQ8IWT6 810 aa17.2■□□□□ 0.34
HNRNPU-214ENST00000638475 IQUBQ8NA54 791 aa17.2■□□□□ 0.34
HNRNPU-214ENST00000638475 CCDC17Q96LX7 622 aa17.2■□□□□ 0.34
HNRNPU-214ENST00000638475 JAK2O60674 1132 aa17.19■□□□□ 0.34
HNRNPU-214ENST00000638475 SKILP12757 684 aa17.19■□□□□ 0.34
HNRNPU-214ENST00000638475 GJB2P29033 226 aa17.19■□□□□ 0.34
HNRNPU-214ENST00000638475 RPAINQ86UA6 219 aa17.19■□□□□ 0.34
HNRNPU-214ENST00000638475 DDX11Q96FC9 970 aa17.19■□□□□ 0.34
HNRNPU-214ENST00000638475 KAT14Q9H8E8 782 aa17.19■□□□□ 0.34
HNRNPU-214ENST00000638475 COL2A1P02458 1487 aaPredicted RBP17.19■□□□□ 0.34
HNRNPU-214ENST00000638475 GOLGA8AA7E2F4 631 aa17.19■□□□□ 0.34
HNRNPU-214ENST00000638475 CTDNEP1O95476 244 aa17.19■□□□□ 0.34
HNRNPU-214ENST00000638475 JAG1P78504 1218 aa17.19■□□□□ 0.34
HNRNPU-214ENST00000638475 APOBEC3FQ8IUX4 373 aaKnown RBP17.19■□□□□ 0.34
HNRNPU-214ENST00000638475 EXOC4Q96A65 974 aa17.19■□□□□ 0.34
HNRNPU-214ENST00000638475 TMEM47Q9BQJ4 181 aa17.19■□□□□ 0.34
HNRNPU-214ENST00000638475 MTMR4Q9NYA4 1195 aa17.19■□□□□ 0.34
HNRNPU-214ENST00000638475 DCAF8L1A6NGE4 600 aa17.18■□□□□ 0.34
HNRNPU-214ENST00000638475 POTECB2RU33 542 aa17.18■□□□□ 0.34
HNRNPU-214ENST00000638475 CPLX1O14810 134 aa17.18■□□□□ 0.34
HNRNPU-214ENST00000638475 ATP2B2Q01814 1243 aa17.18■□□□□ 0.34
HNRNPU-214ENST00000638475 TROAPQ12815 778 aa17.18■□□□□ 0.34
HNRNPU-214ENST00000638475 CAMK4Q16566 473 aa17.18■□□□□ 0.34
HNRNPU-214ENST00000638475 ABCB5Q2M3G0 1257 aa17.18■□□□□ 0.34
HNRNPU-214ENST00000638475 CCDC178Q5BJE1 867 aa17.18■□□□□ 0.34
HNRNPU-214ENST00000638475 FILIP1Q7Z7B0 1213 aa17.18■□□□□ 0.34
HNRNPU-214ENST00000638475 CCDC82Q8N4S0 544 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms