RNA–Protein interactions for RNA: ENST00000638454.1

PRAMEF13-202, Transcript of PRAME family member 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRAMEF13, Length 1,331 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF13-202ENST00000638454 ATP2B2Q01814 1243 aa12.25□□□□□ -0.45
PRAMEF13-202ENST00000638454 ICA1Q05084 483 aa12.25□□□□□ -0.45
PRAMEF13-202ENST00000638454 TUSC1Q2TAM9 212 aa12.25□□□□□ -0.45
PRAMEF13-202ENST00000638454 TBC1D10BQ4KMP7 808 aaPredicted RBP12.25□□□□□ -0.45
PRAMEF13-202ENST00000638454 GPATCH4Q5T3I0 446 aaKnown RBP12.25□□□□□ -0.45
PRAMEF13-202ENST00000638454 CCDC12Q8WUD4 166 aaPredicted RBP12.25□□□□□ -0.45
PRAMEF13-202ENST00000638454 CLIP2Q9UDT6 1046 aa12.25□□□□□ -0.45
PRAMEF13-202ENST00000638454 SEC63Q9UGP8 760 aaKnown RBP12.25□□□□□ -0.45
PRAMEF13-202ENST00000638454 PCDHGA4Q9Y5G9 962 aa12.25□□□□□ -0.45
PRAMEF13-202ENST00000638454 IGKV6D-41A0A0C4DH26 115 aa12.24□□□□□ -0.45
PRAMEF13-202ENST00000638454 hCG_1984214I3L0E3 225 aa12.24□□□□□ -0.45
PRAMEF13-202ENST00000638454 SPTLC1O15269 473 aa12.24□□□□□ -0.45
PRAMEF13-202ENST00000638454 RASA3Q14644 834 aa12.24□□□□□ -0.45
PRAMEF13-202ENST00000638454 C9orf131Q5VYM1 1079 aa12.24□□□□□ -0.45
PRAMEF13-202ENST00000638454 SH3BP5LQ7L8J4 393 aa12.24□□□□□ -0.45
PRAMEF13-202ENST00000638454 FERMT3Q86UX7 667 aa12.24□□□□□ -0.45
PRAMEF13-202ENST00000638454 ZNF713Q8N859 430 aaPredicted RBP12.24□□□□□ -0.45
PRAMEF13-202ENST00000638454 CCDC148Q8NFR7 591 aa12.24□□□□□ -0.45
PRAMEF13-202ENST00000638454 ADARB2Q9NS39 739 aaKnown RBP12.24□□□□□ -0.45
PRAMEF13-202ENST00000638454 CNTNAP1P78357 1384 aa12.23□□□□□ -0.45
PRAMEF13-202ENST00000638454 PITPNM2Q9BZ72 1349 aa12.23□□□□□ -0.45
PRAMEF13-202ENST00000638454 GOLGA6L4A6NEF3 574 aa12.23□□□□□ -0.45
PRAMEF13-202ENST00000638454 SOCS7O14512 581 aa12.23□□□□□ -0.45
PRAMEF13-202ENST00000638454 ASNSP08243 561 aa12.23□□□□□ -0.45
PRAMEF13-202ENST00000638454 YBX3P16989 372 aaKnown RBP eCLIP12.23□□□□□ -0.45
PRAMEF13-202ENST00000638454 CALML3P27482 149 aa12.23□□□□□ -0.45
PRAMEF13-202ENST00000638454 PRELPP51888 382 aa12.23□□□□□ -0.45
PRAMEF13-202ENST00000638454 FOSBP53539 338 aa12.23□□□□□ -0.45
PRAMEF13-202ENST00000638454 KRT40Q6A162 431 aa12.23□□□□□ -0.45
PRAMEF13-202ENST00000638454 SAMD7Q7Z3H4 446 aa12.23□□□□□ -0.45
PRAMEF13-202ENST00000638454 RBM46Q8TBY0 533 aaKnown RBP12.23□□□□□ -0.45
PRAMEF13-202ENST00000638454 DCAF4Q8WV16 495 aa12.23□□□□□ -0.45
PRAMEF13-202ENST00000638454 MKL1Q969V6 931 aa12.23□□□□□ -0.45
PRAMEF13-202ENST00000638454 SYAP1Q96A49 352 aaPredicted RBP12.23□□□□□ -0.45
PRAMEF13-202ENST00000638454 RRP36Q96EU6 259 aaKnown RBP12.23□□□□□ -0.45
PRAMEF13-202ENST00000638454 SPZ1Q9BXG8 430 aa12.23□□□□□ -0.45
PRAMEF13-202ENST00000638454 TMEM39BQ9GZU3 492 aa12.23□□□□□ -0.45
PRAMEF13-202ENST00000638454 DNAJC18Q9H819 358 aa12.23□□□□□ -0.45
PRAMEF13-202ENST00000638454 SH3GLB2Q9NR46 395 aa12.23□□□□□ -0.45
PRAMEF13-202ENST00000638454 HACL1Q9UJ83 578 aa12.23□□□□□ -0.45
PRAMEF13-202ENST00000638454 ISY1Q9ULR0 285 aaKnown RBP12.23□□□□□ -0.45
PRAMEF13-202ENST00000638454 V9GY48 417 aaPredicted RBP12.23□□□□□ -0.45
PRAMEF13-202ENST00000638454 SBF1O95248 1867 aa12.23□□□□□ -0.45
PRAMEF13-202ENST00000638454 CNTNAP5Q8WYK1 1306 aa12.22□□□□□ -0.45
PRAMEF13-202ENST00000638454 PALM3A6NDB9 673 aaPredicted RBP12.22□□□□□ -0.45
PRAMEF13-202ENST00000638454 KLRF2D3W0D1 207 aa12.22□□□□□ -0.45
PRAMEF13-202ENST00000638454 PLEKHA8P1O95397 391 aa12.22□□□□□ -0.45
PRAMEF13-202ENST00000638454 SCG2P13521 617 aa12.22□□□□□ -0.45
PRAMEF13-202ENST00000638454 RESTQ13127 1097 aa12.22□□□□□ -0.45
PRAMEF13-202ENST00000638454 CCDC96Q2M329 555 aa12.22□□□□□ -0.45
PRAMEF13-202ENST00000638454 SUPT20HL1Q3ZLR7 823 aa12.22□□□□□ -0.45
PRAMEF13-202ENST00000638454 GALNT17Q6IS24 598 aa12.22□□□□□ -0.45
PRAMEF13-202ENST00000638454 NBPF11Q86T75 865 aa12.22□□□□□ -0.45
PRAMEF13-202ENST00000638454 LRRC47Q8N1G4 583 aaKnown RBP12.22□□□□□ -0.45
PRAMEF13-202ENST00000638454 TMEM87AQ8NBN3 555 aa12.22□□□□□ -0.45
PRAMEF13-202ENST00000638454 DEFB129Q9H1M3 183 aa12.22□□□□□ -0.45
PRAMEF13-202ENST00000638454 MAD2L2Q9UI95 211 aa12.22□□□□□ -0.45
PRAMEF13-202ENST00000638454 DDX49Q9Y6V7 483 aaKnown RBP12.22□□□□□ -0.45
PRAMEF13-202ENST00000638454 IQCA1LA6NCM1 817 aa12.21□□□□□ -0.45
PRAMEF13-202ENST00000638454 FIBPO43427 364 aa12.21□□□□□ -0.45
PRAMEF13-202ENST00000638454 PPFIA3O75145 1194 aa12.21□□□□□ -0.45
PRAMEF13-202ENST00000638454 PRPF40AO75400 957 aaKnown RBP12.21□□□□□ -0.45
PRAMEF13-202ENST00000638454 GDF11O95390 407 aa12.21□□□□□ -0.45
PRAMEF13-202ENST00000638454 GH2P01242 217 aa12.21□□□□□ -0.45
PRAMEF13-202ENST00000638454 MMP1P03956 469 aa12.21□□□□□ -0.45
PRAMEF13-202ENST00000638454 PDHBP11177 359 aa12.21□□□□□ -0.45
PRAMEF13-202ENST00000638454 EEF2P13639 858 aaKnown RBP12.21□□□□□ -0.45
PRAMEF13-202ENST00000638454 CD46P15529 392 aa12.21□□□□□ -0.45
PRAMEF13-202ENST00000638454 SLC1A4P43007 532 aa12.21□□□□□ -0.45
PRAMEF13-202ENST00000638454 GUCY1B3Q02153 619 aa12.21□□□□□ -0.45
PRAMEF13-202ENST00000638454 DNM1Q05193 864 aaKnown RBP12.21□□□□□ -0.45
PRAMEF13-202ENST00000638454 TRAF1Q13077 416 aa12.21□□□□□ -0.45
PRAMEF13-202ENST00000638454 SEPT2Q15019 361 aa12.21□□□□□ -0.45
PRAMEF13-202ENST00000638454 PFKFB3Q16875 520 aaPredicted RBP12.21□□□□□ -0.45
PRAMEF13-202ENST00000638454 FOXD4L6Q3SYB3 417 aaPredicted RBP12.21□□□□□ -0.45
PRAMEF13-202ENST00000638454 FOXD4L3Q6VB84 417 aaPredicted RBP12.21□□□□□ -0.45
PRAMEF13-202ENST00000638454 SRBD1Q8N5C6 995 aaKnown RBP12.21□□□□□ -0.45
PRAMEF13-202ENST00000638454 GMCL1P1Q8NEA9 526 aa12.21□□□□□ -0.45
PRAMEF13-202ENST00000638454 DCPSQ96C86 337 aaKnown RBP12.21□□□□□ -0.45
PRAMEF13-202ENST00000638454 SPATA32Q96LK8 384 aa12.21□□□□□ -0.45
PRAMEF13-202ENST00000638454 ZNF341Q9BYN7 854 aa12.21□□□□□ -0.45
PRAMEF13-202ENST00000638454 FOXP1Q9H334 677 aaPredicted RBP12.21□□□□□ -0.45
PRAMEF13-202ENST00000638454 PRM3Q9NNZ6 103 aa12.21□□□□□ -0.45
PRAMEF13-202ENST00000638454 MYH6P13533 1939 aa12.21□□□□□ -0.46
PRAMEF13-202ENST00000638454 GREB1LQ9C091 1923 aaPredicted RBP12.21□□□□□ -0.46
PRAMEF13-202ENST00000638454 ELP1O95163 1332 aa12.2□□□□□ -0.46
PRAMEF13-202ENST00000638454 SIPA1L1O43166 1804 aa12.2□□□□□ -0.46
PRAMEF13-202ENST00000638454 FAM196BA6NMK8 535 aa12.2□□□□□ -0.46
PRAMEF13-202ENST00000638454 SNHG28P0DPA3 235 aa12.2□□□□□ -0.46
PRAMEF13-202ENST00000638454 KRT2P35908 639 aa12.2□□□□□ -0.46
PRAMEF13-202ENST00000638454 CAP2P40123 477 aa12.2□□□□□ -0.46
PRAMEF13-202ENST00000638454 UBE2HP62256 183 aa12.2□□□□□ -0.46
PRAMEF13-202ENST00000638454 KIF23Q02241 960 aaPredicted RBP12.2□□□□□ -0.46
PRAMEF13-202ENST00000638454 MAP3K10Q02779 954 aa12.2□□□□□ -0.46
PRAMEF13-202ENST00000638454 PDE4CQ08493 712 aa12.2□□□□□ -0.46
PRAMEF13-202ENST00000638454 FUT2Q10981 343 aa12.2□□□□□ -0.46
PRAMEF13-202ENST00000638454 QPCTQ16769 361 aa12.2□□□□□ -0.46
PRAMEF13-202ENST00000638454 KLHL40Q2TBA0 621 aa12.2□□□□□ -0.46
PRAMEF13-202ENST00000638454 ANGEL2Q5VTE6 544 aaKnown RBP12.2□□□□□ -0.46
PRAMEF13-202ENST00000638454 USP48Q86UV5 1035 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms