RNA–Protein interactions for RNA: ENST00000638409.1

SCARB2-209, Transcript of scavenger receptor class B member 2, humanhuman

Gene SCARB2, Length 2,753 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-209ENST00000638409 TTC30BQ8N4P2 665 aa9.25□□□□□ -0.93
SCARB2-209ENST00000638409 CXorf38Q8TB03 319 aa9.25□□□□□ -0.93
SCARB2-209ENST00000638409 SNX29Q8TEQ0 813 aa9.25□□□□□ -0.93
SCARB2-209ENST00000638409 USP33Q8TEY7 942 aa9.25□□□□□ -0.93
SCARB2-209ENST00000638409 CRBNQ96SW2 442 aa9.25□□□□□ -0.93
SCARB2-209ENST00000638409 SPSB2Q99619 263 aa9.25□□□□□ -0.93
SCARB2-209ENST00000638409 PHACTR1Q9C0D0 580 aa9.25□□□□□ -0.93
SCARB2-209ENST00000638409 LATS2Q9NRM7 1088 aa9.25□□□□□ -0.93
SCARB2-209ENST00000638409 SLC5A4Q9NY91 659 aa9.25□□□□□ -0.93
SCARB2-209ENST00000638409 MIS18AQ9NYP9 233 aa9.25□□□□□ -0.93
SCARB2-209ENST00000638409 LAMB4A4D0S4 1761 aa9.25□□□□□ -0.93
SCARB2-209ENST00000638409 FANCIQ9NVI1 1328 aa9.25□□□□□ -0.93
SCARB2-209ENST00000638409 SERTM1A2A2V5 107 aa9.25□□□□□ -0.93
SCARB2-209ENST00000638409 PSDA5PKW4 1024 aaPredicted RBP9.25□□□□□ -0.93
SCARB2-209ENST00000638409 MICAL2O94851 1124 aa9.25□□□□□ -0.93
SCARB2-209ENST00000638409 SNRPA1P09661 255 aaKnown RBP9.25□□□□□ -0.93
SCARB2-209ENST00000638409 TMEM67Q5HYA8 995 aa9.25□□□□□ -0.93
SCARB2-209ENST00000638409 TPTE2Q6XPS3 522 aa9.25□□□□□ -0.93
SCARB2-209ENST00000638409 GET4Q7L5D6 327 aaPredicted RBP9.25□□□□□ -0.93
SCARB2-209ENST00000638409 RIN3Q8TB24 985 aa9.25□□□□□ -0.93
SCARB2-209ENST00000638409 WDR66Q8TBY9 1149 aa9.25□□□□□ -0.93
SCARB2-209ENST00000638409 CDC5LQ99459 802 aaKnown RBP9.25□□□□□ -0.93
SCARB2-209ENST00000638409 OSGEPQ9NPF4 335 aa9.25□□□□□ -0.93
SCARB2-209ENST00000638409 UBR3Q6ZT12 1888 aa9.24□□□□□ -0.93
SCARB2-209ENST00000638409 TUBGCP6Q96RT7 1819 aa9.24□□□□□ -0.93
SCARB2-209ENST00000638409 ADCY3O60266 1144 aa9.24□□□□□ -0.93
SCARB2-209ENST00000638409 CYP19A1P11511 503 aaPredicted RBP9.24□□□□□ -0.93
SCARB2-209ENST00000638409 HALP42357 657 aa9.24□□□□□ -0.93
SCARB2-209ENST00000638409 KCNQ4P56696 695 aa9.24□□□□□ -0.93
SCARB2-209ENST00000638409 GK5Q6ZS86 529 aa9.24□□□□□ -0.93
SCARB2-209ENST00000638409 ZNF438Q7Z4V0 828 aa9.24□□□□□ -0.93
SCARB2-209ENST00000638409 C1QTNF2Q9BXJ5 285 aa9.24□□□□□ -0.93
SCARB2-209ENST00000638409 STK32BQ9NY57 414 aa9.24□□□□□ -0.93
SCARB2-209ENST00000638409 IP6K2Q9UHH9 426 aa9.24□□□□□ -0.93
SCARB2-209ENST00000638409 AKAP2Q9Y2D5 859 aa9.24□□□□□ -0.93
SCARB2-209ENST00000638409 IPPQ9Y573 584 aa9.24□□□□□ -0.93
SCARB2-209ENST00000638409 GABRDO14764 452 aa9.24□□□□□ -0.93
SCARB2-209ENST00000638409 PHACTR2O75167 634 aa9.24□□□□□ -0.93
SCARB2-209ENST00000638409 LIG3P49916 1009 aa9.24□□□□□ -0.93
SCARB2-209ENST00000638409 ZNF827Q17R98 1081 aa9.24□□□□□ -0.93
SCARB2-209ENST00000638409 DOK7Q18PE1 504 aa9.24□□□□□ -0.93
SCARB2-209ENST00000638409 CCDC93Q567U6 631 aa9.24□□□□□ -0.93
SCARB2-209ENST00000638409 LSRQ86X29 649 aaPredicted RBP9.24□□□□□ -0.93
SCARB2-209ENST00000638409 CPXCR1Q8N123 301 aa9.24□□□□□ -0.93
SCARB2-209ENST00000638409 MUC3BQ9H195 1237 aa9.24□□□□□ -0.93
SCARB2-209ENST00000638409 MBIPQ9NS73 344 aa9.24□□□□□ -0.93
SCARB2-209ENST00000638409 C9orf78Q9NZ63 289 aaPredicted RBP9.24□□□□□ -0.93
SCARB2-209ENST00000638409 TRHDEQ9UKU6 1024 aa9.24□□□□□ -0.93
SCARB2-209ENST00000638409 PCDHB3Q9Y5E6 796 aa9.24□□□□□ -0.93
SCARB2-209ENST00000638409 CASZ1Q86V15 1759 aa9.24□□□□□ -0.93
SCARB2-209ENST00000638409 SOS1Q07889 1333 aaPredicted RBP9.24□□□□□ -0.93
SCARB2-209ENST00000638409 GOLGA6CA6NDK9 693 aa9.24□□□□□ -0.93
SCARB2-209ENST00000638409 GOLGA6BA6NDN3 693 aa9.24□□□□□ -0.93
SCARB2-209ENST00000638409 GOLGA6DP0CG33 693 aa9.24□□□□□ -0.93
SCARB2-209ENST00000638409 PICALMQ13492 652 aa9.24□□□□□ -0.93
SCARB2-209ENST00000638409 LRRTM3Q86VH5 581 aa9.24□□□□□ -0.93
SCARB2-209ENST00000638409 DNAJC10Q8IXB1 793 aa9.24□□□□□ -0.93
SCARB2-209ENST00000638409 GOLGA6AQ9NYA3 693 aa9.24□□□□□ -0.93
SCARB2-209ENST00000638409 HDAC9Q9UKV0 1011 aa9.24□□□□□ -0.93
SCARB2-209ENST00000638409 MYH14Q7Z406 1995 aaKnown RBP9.23□□□□□ -0.93
SCARB2-209ENST00000638409 TNKSO95271 1327 aa9.23□□□□□ -0.93
SCARB2-209ENST00000638409 STARD3NLO95772 234 aa9.23□□□□□ -0.93
SCARB2-209ENST00000638409 HOXB7P09629 217 aa9.23□□□□□ -0.93
SCARB2-209ENST00000638409 TRIM27P14373 513 aa9.23□□□□□ -0.93
SCARB2-209ENST00000638409 TFE3P19532 575 aaPredicted RBP9.23□□□□□ -0.93
SCARB2-209ENST00000638409 SDSP20132 328 aa9.23□□□□□ -0.93
SCARB2-209ENST00000638409 GEMIN4P57678 1058 aaKnown RBP9.23□□□□□ -0.93
SCARB2-209ENST00000638409 CCDC70Q6NSX1 233 aa9.23□□□□□ -0.93
SCARB2-209ENST00000638409 INTS5Q6P9B9 1019 aaKnown RBP9.23□□□□□ -0.93
SCARB2-209ENST00000638409 PJA1Q8NG27 643 aa9.23□□□□□ -0.93
SCARB2-209ENST00000638409 GPSM2P81274 684 aa9.23□□□□□ -0.93
SCARB2-209ENST00000638409 FLAD1Q8NFF5 587 aa9.23□□□□□ -0.93
SCARB2-209ENST00000638409 CHMP4CQ96CF2 233 aa9.23□□□□□ -0.93
SCARB2-209ENST00000638409 CHMP3Q9Y3E7 222 aa9.23□□□□□ -0.93
SCARB2-209ENST00000638409 F13A1P00488 732 aa9.22□□□□□ -0.93
SCARB2-209ENST00000638409 CRKLP46109 303 aaKnown RBP9.22□□□□□ -0.93
SCARB2-209ENST00000638409 PASD1Q8IV76 773 aa9.22□□□□□ -0.93
SCARB2-209ENST00000638409 LRRC27Q9C0I9 530 aa9.22□□□□□ -0.93
SCARB2-209ENST00000638409 SUV39H2Q9H5I1 410 aa9.22□□□□□ -0.93
SCARB2-209ENST00000638409 POTECB2RU33 542 aa9.22□□□□□ -0.93
SCARB2-209ENST00000638409 RPS6KA4O75676 772 aa9.22□□□□□ -0.93
SCARB2-209ENST00000638409 WNT7BP56706 349 aa9.22□□□□□ -0.93
SCARB2-209ENST00000638409 COL24A1Q17RW2 1714 aa9.22□□□□□ -0.93
SCARB2-209ENST00000638409 CC2D1AQ6P1N0 951 aaPredicted RBP9.22□□□□□ -0.93
SCARB2-209ENST00000638409 DRC7Q8IY82 874 aa9.22□□□□□ -0.93
SCARB2-209ENST00000638409 SARGQ9BW04 601 aa9.22□□□□□ -0.93
SCARB2-209ENST00000638409 CHRDQ9H2X0 955 aa9.22□□□□□ -0.93
SCARB2-209ENST00000638409 CCNFP41002 786 aa9.21□□□□□ -0.93
SCARB2-209ENST00000638409 DMRTA1Q5VZB9 504 aa9.21□□□□□ -0.93
SCARB2-209ENST00000638409 ENAHQ8N8S7 591 aaPredicted RBP9.21□□□□□ -0.93
SCARB2-209ENST00000638409 ZNF784Q8NCA9 323 aaPredicted RBP9.21□□□□□ -0.93
SCARB2-209ENST00000638409 PPP4R2Q9NY27 417 aa9.21□□□□□ -0.93
SCARB2-209ENST00000638409 MAPRE3Q9UPY8 281 aa9.21□□□□□ -0.93
SCARB2-209ENST00000638409 USP16Q9Y5T5 823 aa9.21□□□□□ -0.93
SCARB2-209ENST00000638409 ERBB4Q15303 1308 aa9.21□□□□□ -0.94
SCARB2-209ENST00000638409 PNPLA7Q6ZV29 1317 aa9.21□□□□□ -0.94
SCARB2-209ENST00000638409 ABLIM3O94929 683 aa9.21□□□□□ -0.94
SCARB2-209ENST00000638409 PURAQ00577 322 aaKnown RBP9.21□□□□□ -0.94
SCARB2-209ENST00000638409 FAM178BQ8IXR5 827 aa9.21□□□□□ -0.94
SCARB2-209ENST00000638409 TRMT2AQ8IZ69 625 aaKnown RBP9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms