RNA–Protein interactions for RNA: ENST00000638264.1

TARDBP-229, Transcript of TAR DNA binding protein, humanhuman

TSL 1 (best) BASIC

Gene TARDBP, Length 774 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-229ENST00000638264 SYDE2Q5VT97 1194 aa13.49□□□□□ -0.25
TARDBP-229ENST00000638264 SPRYD7Q5W111 196 aa13.49□□□□□ -0.25
TARDBP-229ENST00000638264 RGMBQ6NW40 437 aa13.49□□□□□ -0.25
TARDBP-229ENST00000638264 KCTD1Q719H9 257 aa13.49□□□□□ -0.25
TARDBP-229ENST00000638264 CCDC84Q86UT8 332 aaPredicted RBP13.49□□□□□ -0.25
TARDBP-229ENST00000638264 SPICE1Q8N0Z3 855 aa13.49□□□□□ -0.25
TARDBP-229ENST00000638264 PRPF38AQ8NAV1 312 aaKnown RBP13.49□□□□□ -0.25
TARDBP-229ENST00000638264 MTMR8Q96EF0 704 aa13.49□□□□□ -0.25
TARDBP-229ENST00000638264 SLC26A6Q9BXS9 759 aa13.49□□□□□ -0.25
TARDBP-229ENST00000638264 GPCPD1Q9NPB8 672 aa13.49□□□□□ -0.25
TARDBP-229ENST00000638264 SH3GLB2Q9NR46 395 aa13.49□□□□□ -0.25
TARDBP-229ENST00000638264 HOXC10Q9NYD6 342 aa13.49□□□□□ -0.25
TARDBP-229ENST00000638264 ISY1Q9ULR0 285 aaKnown RBP13.49□□□□□ -0.25
TARDBP-229ENST00000638264 SLC45A1Q9Y2W3 748 aa13.49□□□□□ -0.25
TARDBP-229ENST00000638264 PNMA6FA0A0J9YX94 578 aa13.48□□□□□ -0.25
TARDBP-229ENST00000638264 SLC4A3P48751 1232 aa13.48□□□□□ -0.25
TARDBP-229ENST00000638264 INHBEP58166 350 aa13.48□□□□□ -0.25
TARDBP-229ENST00000638264 NUCB2P80303 420 aa13.48□□□□□ -0.25
TARDBP-229ENST00000638264 IKQ13123 557 aaPredicted RBP13.48□□□□□ -0.25
TARDBP-229ENST00000638264 PFKFB3Q16875 520 aaPredicted RBP13.48□□□□□ -0.25
TARDBP-229ENST00000638264 KIAA1755Q5JYT7 1200 aa13.48□□□□□ -0.25
TARDBP-229ENST00000638264 ADGRF4Q8IZF3 695 aa13.48□□□□□ -0.25
TARDBP-229ENST00000638264 CCDC12Q8WUD4 166 aaPredicted RBP13.48□□□□□ -0.25
TARDBP-229ENST00000638264 PHKBQ93100 1093 aa13.48□□□□□ -0.25
TARDBP-229ENST00000638264 SLF1Q9BQI6 1058 aa13.48□□□□□ -0.25
TARDBP-229ENST00000638264 CREBZFQ9NS37 354 aa13.48□□□□□ -0.25
TARDBP-229ENST00000638264 AGTPBP1Q9UPW5 1226 aa13.48□□□□□ -0.25
TARDBP-229ENST00000638264 V9GY48 417 aaPredicted RBP13.48□□□□□ -0.25
TARDBP-229ENST00000638264 MANSC4A6NHS7 340 aaPredicted RBP13.47□□□□□ -0.25
TARDBP-229ENST00000638264 ZBTB5O15062 677 aa13.47□□□□□ -0.25
TARDBP-229ENST00000638264 CYTH3O43739 400 aa13.47□□□□□ -0.25
TARDBP-229ENST00000638264 JAK2O60674 1132 aa13.47□□□□□ -0.25
TARDBP-229ENST00000638264 SCG2P13521 617 aa13.47□□□□□ -0.25
TARDBP-229ENST00000638264 FDPSP14324 419 aaKnown RBP13.47□□□□□ -0.25
TARDBP-229ENST00000638264 ZNF157P51786 506 aaPredicted RBP13.47□□□□□ -0.25
TARDBP-229ENST00000638264 TRIM29Q14134 588 aa13.47□□□□□ -0.25
TARDBP-229ENST00000638264 COG2Q14746 738 aa13.47□□□□□ -0.25
TARDBP-229ENST00000638264 LARP1BQ659C4 914 aaKnown RBP13.47□□□□□ -0.25
TARDBP-229ENST00000638264 TTBK2Q6IQ55 1244 aa13.47□□□□□ -0.25
TARDBP-229ENST00000638264 CATSPERGQ6ZRH7 1159 aa13.47□□□□□ -0.25
TARDBP-229ENST00000638264 REM2Q8IYK8 340 aaPredicted RBP13.47□□□□□ -0.25
TARDBP-229ENST00000638264 GTF3C2Q8WUA4 911 aaPredicted RBP13.47□□□□□ -0.25
TARDBP-229ENST00000638264 DDX11Q96FC9 970 aa13.47□□□□□ -0.25
TARDBP-229ENST00000638264 TANGO6Q9C0B7 1094 aa13.47□□□□□ -0.25
TARDBP-229ENST00000638264 UBA5Q9GZZ9 404 aa13.47□□□□□ -0.25
TARDBP-229ENST00000638264 RPAP3Q9H6T3 665 aaPredicted RBP13.47□□□□□ -0.25
TARDBP-229ENST00000638264 ZCCHC17Q9NP64 241 aaKnown RBP13.47□□□□□ -0.25
TARDBP-229ENST00000638264 PPP1R9AQ9ULJ8 1098 aa13.47□□□□□ -0.25
TARDBP-229ENST00000638264 ABT1Q9ULW3 272 aaKnown RBP13.47□□□□□ -0.25
TARDBP-229ENST00000638264 TESPA1A2RU30 521 aaPredicted RBP13.46□□□□□ -0.25
TARDBP-229ENST00000638264 FLOT1O75955 427 aa13.46□□□□□ -0.25
TARDBP-229ENST00000638264 SLC10A3P09131 477 aa13.46□□□□□ -0.25
TARDBP-229ENST00000638264 OSBPP22059 807 aa13.46□□□□□ -0.25
TARDBP-229ENST00000638264 DDIT3P35638 169 aa13.46□□□□□ -0.25
TARDBP-229ENST00000638264 APLP1P51693 650 aa13.46□□□□□ -0.25
TARDBP-229ENST00000638264 OAZ1P54368 228 aa13.46□□□□□ -0.25
TARDBP-229ENST00000638264 GALNT17Q6IS24 598 aa13.46□□□□□ -0.25
TARDBP-229ENST00000638264 PPP1R18Q6NYC8 613 aa13.46□□□□□ -0.25
TARDBP-229ENST00000638264 LBX2Q6XYB7 198 aa13.46□□□□□ -0.25
TARDBP-229ENST00000638264 RASAL3Q86YV0 1011 aa13.46□□□□□ -0.25
TARDBP-229ENST00000638264 CCDC82Q8N4S0 544 aa13.46□□□□□ -0.25
TARDBP-229ENST00000638264 MB21D1Q8N884 522 aa13.46□□□□□ -0.25
TARDBP-229ENST00000638264 CCDC148Q8NFR7 591 aa13.46□□□□□ -0.25
TARDBP-229ENST00000638264 CNKSR2Q8WXI2 1034 aa13.46□□□□□ -0.25
TARDBP-229ENST00000638264 MS4A4AQ96JQ5 239 aa13.46□□□□□ -0.25
TARDBP-229ENST00000638264 C8orf76Q96K31 380 aa13.46□□□□□ -0.25
TARDBP-229ENST00000638264 NUP88Q99567 741 aaPredicted RBP13.46□□□□□ -0.25
TARDBP-229ENST00000638264 ALG1Q9BT22 464 aa13.46□□□□□ -0.25
TARDBP-229ENST00000638264 MAF1Q9H063 256 aa13.46□□□□□ -0.25
TARDBP-229ENST00000638264 GLT8D2Q9H1C3 349 aa13.46□□□□□ -0.25
TARDBP-229ENST00000638264 JMJD4Q9H9V9 463 aa13.46□□□□□ -0.25
TARDBP-229ENST00000638264 PNMA3Q9UL41 463 aa13.46□□□□□ -0.25
TARDBP-229ENST00000638264 PRR12Q9ULL5 1215 aa13.46□□□□□ -0.25
TARDBP-229ENST00000638264 ADAMTS5Q9UNA0 930 aa13.46□□□□□ -0.25
TARDBP-229ENST00000638264 ZBED4O75132 1171 aa13.45□□□□□ -0.26
TARDBP-229ENST00000638264 CALML3P27482 149 aa13.45□□□□□ -0.26
TARDBP-229ENST00000638264 DSG3P32926 999 aa13.45□□□□□ -0.26
TARDBP-229ENST00000638264 GJA5P36382 358 aa13.45□□□□□ -0.26
TARDBP-229ENST00000638264 PKN1Q16512 942 aa13.45□□□□□ -0.26
TARDBP-229ENST00000638264 GADL1Q6ZQY3 521 aa13.45□□□□□ -0.26
TARDBP-229ENST00000638264 RASGRP2Q7LDG7 609 aa13.45□□□□□ -0.26
TARDBP-229ENST00000638264 ANKRD23Q86SG2 305 aa13.45□□□□□ -0.26
TARDBP-229ENST00000638264 CMTR1Q8N1G2 835 aaKnown RBP13.45□□□□□ -0.26
TARDBP-229ENST00000638264 SPRYD3Q8NCJ5 442 aa13.45□□□□□ -0.26
TARDBP-229ENST00000638264 FBXO18Q8NFZ0 1043 aa13.45□□□□□ -0.26
TARDBP-229ENST00000638264 AMNQ9BXJ7 453 aa13.45□□□□□ -0.26
TARDBP-229ENST00000638264 RANBP17Q9H2T7 1088 aaKnown RBP13.45□□□□□ -0.26
TARDBP-229ENST00000638264 VAT1LQ9HCJ6 419 aa13.45□□□□□ -0.26
TARDBP-229ENST00000638264 FOXD4L1Q9NU39 408 aa13.45□□□□□ -0.26
TARDBP-229ENST00000638264 BARHL2Q9NY43 387 aa13.45□□□□□ -0.26
TARDBP-229ENST00000638264 CHMP5Q9NZZ3 219 aa13.45□□□□□ -0.26
TARDBP-229ENST00000638264 CTDP1Q9Y5B0 961 aaPredicted RBP13.45□□□□□ -0.26
TARDBP-229ENST00000638264 WDR33Q9C0J8 1336 aaKnown RBP13.44□□□□□ -0.26
TARDBP-229ENST00000638264 ESYT2A0FGR8 921 aa13.44□□□□□ -0.26
TARDBP-229ENST00000638264 H3BQV1 296 aa13.44□□□□□ -0.26
TARDBP-229ENST00000638264 ATP2A1O14983 1001 aa13.44□□□□□ -0.26
TARDBP-229ENST00000638264 STX6O43752 255 aa13.44□□□□□ -0.26
TARDBP-229ENST00000638264 SYT1P21579 422 aa13.44□□□□□ -0.26
TARDBP-229ENST00000638264 SLC16A2P36021 539 aa13.44□□□□□ -0.26
TARDBP-229ENST00000638264 IRX3P78415 501 aaPredicted RBP13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms