RNA–Protein interactions for RNA: ENST00000638114.1

CACNA1A-259, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 3

Gene CACNA1A, Length 517 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-259ENST00000638114 SNRNP48Q6IEG0 339 aaKnown RBP19.82■□□□□ 0.76
CACNA1A-259ENST00000638114 NECAB2Q7Z6G3 386 aa19.82■□□□□ 0.76
CACNA1A-259ENST00000638114 TEX13BQ9BXU2 312 aa19.82■□□□□ 0.76
CACNA1A-259ENST00000638114 OGDHLQ9ULD0 1010 aa19.82■□□□□ 0.76
CACNA1A-259ENST00000638114 TMEM232C9JQI7 657 aa19.81■□□□□ 0.76
CACNA1A-259ENST00000638114 CNGA1P29973 690 aa19.81■□□□□ 0.76
CACNA1A-259ENST00000638114 SLC1A4P43007 532 aa19.81■□□□□ 0.76
CACNA1A-259ENST00000638114 SLC4A3P48751 1232 aa19.81■□□□□ 0.76
CACNA1A-259ENST00000638114 IKQ13123 557 aaPredicted RBP19.81■□□□□ 0.76
CACNA1A-259ENST00000638114 TTC22Q5TAA0 569 aa19.81■□□□□ 0.76
CACNA1A-259ENST00000638114 CPXCR1Q8N123 301 aa19.81■□□□□ 0.76
CACNA1A-259ENST00000638114 GMCL1Q96IK5 515 aa19.81■□□□□ 0.76
CACNA1A-259ENST00000638114 ZNFX1Q9P2E3 1918 aaKnown RBP19.8■□□□□ 0.76
CACNA1A-259ENST00000638114 H0YGN5 161 aa19.8■□□□□ 0.76
CACNA1A-259ENST00000638114 PGK2P07205 417 aa19.8■□□□□ 0.76
CACNA1A-259ENST00000638114 MCCP23508 829 aa19.8■□□□□ 0.76
CACNA1A-259ENST00000638114 STAT2P52630 851 aa19.8■□□□□ 0.76
CACNA1A-259ENST00000638114 MFSD6Q6ZSS7 791 aa19.8■□□□□ 0.76
CACNA1A-259ENST00000638114 TBC1D10CQ8IV04 446 aa19.8■□□□□ 0.76
CACNA1A-259ENST00000638114 NBPF3Q9H094 633 aa19.8■□□□□ 0.76
CACNA1A-259ENST00000638114 RAVER2Q9HCJ3 691 aaKnown RBP19.8■□□□□ 0.76
CACNA1A-259ENST00000638114 MTMR7Q9Y216 660 aa19.8■□□□□ 0.76
CACNA1A-259ENST00000638114 GSPT1P15170 499 aaKnown RBP19.79■□□□□ 0.76
CACNA1A-259ENST00000638114 AKNAD1Q5T1N1 836 aa19.79■□□□□ 0.76
CACNA1A-259ENST00000638114 LHX8Q68G74 356 aa19.79■□□□□ 0.76
CACNA1A-259ENST00000638114 STAG1Q8WVM7 1258 aa19.79■□□□□ 0.76
CACNA1A-259ENST00000638114 MAML3Q96JK9 1138 aa19.79■□□□□ 0.76
CACNA1A-259ENST00000638114 RNF41Q9H4P4 317 aaPredicted RBP19.79■□□□□ 0.76
CACNA1A-259ENST00000638114 SLC38A10Q9HBR0 1119 aa19.79■□□□□ 0.76
CACNA1A-259ENST00000638114 DDX20Q9UHI6 824 aaKnown RBP19.79■□□□□ 0.76
CACNA1A-259ENST00000638114 FRMPD3Q5JV73 1810 aa19.79■□□□□ 0.76
CACNA1A-259ENST00000638114 ZNF213O14771 459 aa19.78■□□□□ 0.76
CACNA1A-259ENST00000638114 ATP2A1O14983 1001 aa19.78■□□□□ 0.76
CACNA1A-259ENST00000638114 EVI5O60447 810 aa19.78■□□□□ 0.76
CACNA1A-259ENST00000638114 IGHA2P01877 340 aa19.78■□□□□ 0.76
CACNA1A-259ENST00000638114 PCP11498 1178 aaKnown RBP19.78■□□□□ 0.76
CACNA1A-259ENST00000638114 CYBAP13498 195 aa19.78■□□□□ 0.76
CACNA1A-259ENST00000638114 MNX1P50219 401 aaPredicted RBP19.78■□□□□ 0.76
CACNA1A-259ENST00000638114 KCTD1Q719H9 257 aa19.78■□□□□ 0.76
CACNA1A-259ENST00000638114 FAM160B2Q86V87 743 aa19.78■□□□□ 0.76
CACNA1A-259ENST00000638114 TRPV1Q8NER1 839 aa19.78■□□□□ 0.76
CACNA1A-259ENST00000638114 CHURC1Q8WUH1 139 aa19.78■□□□□ 0.76
CACNA1A-259ENST00000638114 C11orf49Q9H6J7 331 aa19.78■□□□□ 0.76
CACNA1A-259ENST00000638114 RIPK3Q9Y572 518 aa19.78■□□□□ 0.76
CACNA1A-259ENST00000638114 NR2E3Q9Y5X4 410 aa19.78■□□□□ 0.76
CACNA1A-259ENST00000638114 LAMA4Q16363 1823 aa19.78■□□□□ 0.76
CACNA1A-259ENST00000638114 MSCO60682 206 aa19.77■□□□□ 0.76
CACNA1A-259ENST00000638114 NOVP48745 357 aa19.77■□□□□ 0.76
CACNA1A-259ENST00000638114 CCDC96Q2M329 555 aa19.77■□□□□ 0.76
CACNA1A-259ENST00000638114 RCSD1Q6JBY9 416 aa19.77■□□□□ 0.76
CACNA1A-259ENST00000638114 RASGRP2Q7LDG7 609 aa19.77■□□□□ 0.76
CACNA1A-259ENST00000638114 DSCC1Q9BVC3 393 aa19.77■□□□□ 0.76
CACNA1A-259ENST00000638114 TCP11L1Q9NUJ3 509 aa19.77■□□□□ 0.76
CACNA1A-259ENST00000638114 PLXNA1Q9UIW2 1896 aa19.77■□□□□ 0.76
CACNA1A-259ENST00000638114 FDX1P10109 184 aa19.76■□□□□ 0.75
CACNA1A-259ENST00000638114 TOP1P11387 765 aaKnown RBP19.76■□□□□ 0.75
CACNA1A-259ENST00000638114 OAZ1P54368 228 aa19.76■□□□□ 0.75
CACNA1A-259ENST00000638114 ZNF792Q3KQV3 632 aa19.76■□□□□ 0.75
CACNA1A-259ENST00000638114 ESR2Q92731 530 aa19.76■□□□□ 0.75
CACNA1A-259ENST00000638114 DDX11Q96FC9 970 aa19.76■□□□□ 0.75
CACNA1A-259ENST00000638114 NEDD4P46934 1319 aa19.76■□□□□ 0.75
CACNA1A-259ENST00000638114 ALPK3Q96L96 1907 aa19.75■□□□□ 0.75
CACNA1A-259ENST00000638114 PRAMEF19Q5SWL8 479 aa19.75■□□□□ 0.75
CACNA1A-259ENST00000638114 DCAF4Q8WV16 495 aa19.75■□□□□ 0.75
CACNA1A-259ENST00000638114 TMEM47Q9BQJ4 181 aa19.75■□□□□ 0.75
CACNA1A-259ENST00000638114 DIS3Q9Y2L1 958 aaKnown RBP19.75■□□□□ 0.75
CACNA1A-259ENST00000638114 PLA2G6O60733 806 aa19.74■□□□□ 0.75
CACNA1A-259ENST00000638114 IMMTQ16891 758 aaKnown RBP19.74■□□□□ 0.75
CACNA1A-259ENST00000638114 ANO1Q5XXA6 986 aa19.74■□□□□ 0.75
CACNA1A-259ENST00000638114 CHST13Q8NET6 341 aa19.74■□□□□ 0.75
CACNA1A-259ENST00000638114 TINF2Q9BSI4 451 aa19.74■□□□□ 0.75
CACNA1A-259ENST00000638114 IL25Q9H293 177 aa19.74■□□□□ 0.75
CACNA1A-259ENST00000638114 HOMER2Q9NSB8 354 aa19.74■□□□□ 0.75
CACNA1A-259ENST00000638114 FBXO40Q9UH90 709 aa19.74■□□□□ 0.75
CACNA1A-259ENST00000638114 CTNNA3Q9UI47 895 aa19.74■□□□□ 0.75
CACNA1A-259ENST00000638114 PFASO15067 1338 aa19.74■□□□□ 0.75
CACNA1A-259ENST00000638114 SEPT4O43236 478 aa19.73■□□□□ 0.75
CACNA1A-259ENST00000638114 SNAP25P60880 206 aa19.73■□□□□ 0.75
CACNA1A-259ENST00000638114 ANKRD35Q8N283 1001 aa19.73■□□□□ 0.75
CACNA1A-259ENST00000638114 ZKSCAN3Q9BRR0 538 aa19.73■□□□□ 0.75
CACNA1A-259ENST00000638114 PRR12Q9ULL5 1215 aa19.73■□□□□ 0.75
CACNA1A-259ENST00000638114 RAD50Q92878 1312 aa19.73■□□□□ 0.75
CACNA1A-259ENST00000638114 HABP4Q5JVS0 413 aaKnown RBP19.72■□□□□ 0.75
CACNA1A-259ENST00000638114 CCDC174Q6PII3 467 aa19.72■□□□□ 0.75
CACNA1A-259ENST00000638114 C7orf61Q8IZ16 206 aa19.72■□□□□ 0.75
CACNA1A-259ENST00000638114 RUFY2Q8WXA3 655 aa19.72■□□□□ 0.75
CACNA1A-259ENST00000638114 AGBL1Q96MI9 1066 aa19.72■□□□□ 0.75
CACNA1A-259ENST00000638114 TTC14Q96N46 770 aa19.72■□□□□ 0.75
CACNA1A-259ENST00000638114 GPCPD1Q9NPB8 672 aa19.72■□□□□ 0.75
CACNA1A-259ENST00000638114 COLQQ9Y215 455 aaPredicted RBP19.72■□□□□ 0.75
CACNA1A-259ENST00000638114 FRMPD2Q68DX3 1309 aaPredicted RBP19.72■□□□□ 0.75
CACNA1A-259ENST00000638114 DNAJC25-GNG10A0A024R161 153 aa19.71■□□□□ 0.75
CACNA1A-259ENST00000638114 KDM4AO75164 1064 aa19.71■□□□□ 0.75
CACNA1A-259ENST00000638114 MYCNP04198 464 aaPredicted RBP19.71■□□□□ 0.75
CACNA1A-259ENST00000638114 COL6A1P12109 1028 aa19.71■□□□□ 0.75
CACNA1A-259ENST00000638114 CHMLP26374 656 aa19.71■□□□□ 0.75
CACNA1A-259ENST00000638114 SLC16A2P36021 539 aa19.71■□□□□ 0.75
CACNA1A-259ENST00000638114 TTBK2Q6IQ55 1244 aa19.71■□□□□ 0.75
CACNA1A-259ENST00000638114 CHRDL2Q6WN34 429 aa19.71■□□□□ 0.75
CACNA1A-259ENST00000638114 DHX30Q7L2E3 1194 aaKnown RBP eCLIP19.71■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms