RNA–Protein interactions for RNA: ENST00000637709.2

SCN8A-214, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

TSL 5

Gene SCN8A, Length 2,489 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-214ENST00000637709 SH3BP5LQ7L8J4 393 aa17.46■□□□□ 0.39
SCN8A-214ENST00000637709 TMC6Q7Z403 805 aa17.46■□□□□ 0.39
SCN8A-214ENST00000637709 PODNQ7Z5L7 613 aa17.46■□□□□ 0.39
SCN8A-214ENST00000637709 PAGE5Q96GU1 130 aa17.46■□□□□ 0.39
SCN8A-214ENST00000637709 STK32BQ9NY57 414 aa17.46■□□□□ 0.39
SCN8A-214ENST00000637709 TMEM232C9JQI7 657 aa17.46■□□□□ 0.39
SCN8A-214ENST00000637709 M0R2N6 131 aa17.46■□□□□ 0.39
SCN8A-214ENST00000637709 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.46■□□□□ 0.39
SCN8A-214ENST00000637709 ZNF579Q8NAF0 562 aaKnown RBP17.46■□□□□ 0.39
SCN8A-214ENST00000637709 MED15Q96RN5 788 aa17.46■□□□□ 0.39
SCN8A-214ENST00000637709 FAM198AQ9UFP1 575 aa17.46■□□□□ 0.39
SCN8A-214ENST00000637709 SEC63Q9UGP8 760 aaKnown RBP17.46■□□□□ 0.39
SCN8A-214ENST00000637709 ZBTB12Q9Y330 459 aaPredicted RBP17.46■□□□□ 0.39
SCN8A-214ENST00000637709 CALML3P27482 149 aa17.45■□□□□ 0.38
SCN8A-214ENST00000637709 GNAQP50148 359 aa17.45■□□□□ 0.38
SCN8A-214ENST00000637709 CCDC96Q2M329 555 aa17.45■□□□□ 0.38
SCN8A-214ENST00000637709 RRP36Q96EU6 259 aaKnown RBP17.45■□□□□ 0.38
SCN8A-214ENST00000637709 MRFAP1L1Q96HT8 127 aa17.45■□□□□ 0.38
SCN8A-214ENST00000637709 MAPK8IP1Q9UQF2 711 aa17.45■□□□□ 0.38
SCN8A-214ENST00000637709 CCNT1O60563 726 aaKnown RBP17.45■□□□□ 0.38
SCN8A-214ENST00000637709 FANCCQ00597 558 aa17.45■□□□□ 0.38
SCN8A-214ENST00000637709 CERS3Q8IU89 383 aa17.45■□□□□ 0.38
SCN8A-214ENST00000637709 GJA10Q969M2 543 aa17.45■□□□□ 0.38
SCN8A-214ENST00000637709 MTRQ99707 1265 aa17.45■□□□□ 0.38
SCN8A-214ENST00000637709 ZNF277Q9NRM2 450 aaPredicted RBP17.45■□□□□ 0.38
SCN8A-214ENST00000637709 PCNTO95613 3336 aa17.45■□□□□ 0.38
SCN8A-214ENST00000637709 CLRN2A0PK11 232 aa17.44■□□□□ 0.38
SCN8A-214ENST00000637709 USP27XA6NNY8 438 aa17.44■□□□□ 0.38
SCN8A-214ENST00000637709 SERPINC1P01008 464 aa17.44■□□□□ 0.38
SCN8A-214ENST00000637709 CD44P16070 742 aaKnown RBP17.44■□□□□ 0.38
SCN8A-214ENST00000637709 MYL5Q02045 173 aa17.44■□□□□ 0.38
SCN8A-214ENST00000637709 HHIPL2Q6UWX4 724 aa17.44■□□□□ 0.38
SCN8A-214ENST00000637709 LRRC8AQ8IWT6 810 aa17.44■□□□□ 0.38
SCN8A-214ENST00000637709 C4orf32Q8N8J7 132 aa17.44■□□□□ 0.38
SCN8A-214ENST00000637709 RASSF8Q8NHQ8 419 aa17.44■□□□□ 0.38
SCN8A-214ENST00000637709 PRMT6Q96LA8 375 aaPredicted RBP17.44■□□□□ 0.38
SCN8A-214ENST00000637709 C16orf45Q96MC5 204 aaPredicted RBP17.44■□□□□ 0.38
SCN8A-214ENST00000637709 QSER1Q2KHR3 1735 aa17.44■□□□□ 0.38
SCN8A-214ENST00000637709 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.44■□□□□ 0.38
SCN8A-214ENST00000637709 TSC1Q92574 1164 aa17.44■□□□□ 0.38
SCN8A-214ENST00000637709 FERMT2Q96AC1 680 aa17.44■□□□□ 0.38
SCN8A-214ENST00000637709 NUP88Q99567 741 aaPredicted RBP17.44■□□□□ 0.38
SCN8A-214ENST00000637709 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.44■□□□□ 0.38
SCN8A-214ENST00000637709 SIPA1L1O43166 1804 aa17.43■□□□□ 0.38
SCN8A-214ENST00000637709 TTLL1O95922 423 aa17.43■□□□□ 0.38
SCN8A-214ENST00000637709 CUL4BQ13620 913 aa17.43■□□□□ 0.38
SCN8A-214ENST00000637709 UBE2SQ16763 222 aa17.43■□□□□ 0.38
SCN8A-214ENST00000637709 CCDC178Q5BJE1 867 aa17.43■□□□□ 0.38
SCN8A-214ENST00000637709 STRIP1Q5VSL9 837 aa17.43■□□□□ 0.38
SCN8A-214ENST00000637709 STYK1Q6J9G0 422 aa17.43■□□□□ 0.38
SCN8A-214ENST00000637709 C7orf43Q8WVR3 580 aa17.43■□□□□ 0.38
SCN8A-214ENST00000637709 ZDHHC15Q96MV8 337 aa17.43■□□□□ 0.38
SCN8A-214ENST00000637709 BPIFA3Q9BQP9 254 aa17.43■□□□□ 0.38
SCN8A-214ENST00000637709 SAMSN1Q9NSI8 373 aaKnown RBP17.43■□□□□ 0.38
SCN8A-214ENST00000637709 PPP1R11O60927 126 aaPredicted RBP17.43■□□□□ 0.38
SCN8A-214ENST00000637709 HLA-DOAP06340 250 aa17.43■□□□□ 0.38
SCN8A-214ENST00000637709 SLFN14P0C7P3 912 aa17.43■□□□□ 0.38
SCN8A-214ENST00000637709 JAG1P78504 1218 aa17.43■□□□□ 0.38
SCN8A-214ENST00000637709 CFAP100Q494V2 611 aa17.43■□□□□ 0.38
SCN8A-214ENST00000637709 LRRC15Q8TF66 581 aa17.43■□□□□ 0.38
SCN8A-214ENST00000637709 SPZ1Q9BXG8 430 aa17.43■□□□□ 0.38
SCN8A-214ENST00000637709 TRMT1Q9NXH9 659 aaKnown RBP17.43■□□□□ 0.38
SCN8A-214ENST00000637709 NFE2L3Q9Y4A8 694 aa17.43■□□□□ 0.38
SCN8A-214ENST00000637709 TCP10L2B9ZVM9 353 aa17.42■□□□□ 0.38
SCN8A-214ENST00000637709 USP17L10C9JJH3 530 aa17.42■□□□□ 0.38
SCN8A-214ENST00000637709 CDAN1Q8IWY9 1227 aa17.42■□□□□ 0.38
SCN8A-214ENST00000637709 ADGRF4Q8IZF3 695 aa17.42■□□□□ 0.38
SCN8A-214ENST00000637709 CCDC148Q8NFR7 591 aa17.42■□□□□ 0.38
SCN8A-214ENST00000637709 PPP1R1BQ9UD71 204 aaPredicted RBP17.42■□□□□ 0.38
SCN8A-214ENST00000637709 SUGT1Q9Y2Z0 365 aa17.42■□□□□ 0.38
SCN8A-214ENST00000637709 SMCHD1A6NHR9 2005 aa17.42■□□□□ 0.38
SCN8A-214ENST00000637709 SARSP49591 514 aaKnown RBP17.42■□□□□ 0.38
SCN8A-214ENST00000637709 MORC3Q14149 939 aa17.42■□□□□ 0.38
SCN8A-214ENST00000637709 DHX8Q14562 1220 aaKnown RBP17.42■□□□□ 0.38
SCN8A-214ENST00000637709 SEPT2Q15019 361 aa17.42■□□□□ 0.38
SCN8A-214ENST00000637709 CREBRFQ8IUR6 639 aa17.42■□□□□ 0.38
SCN8A-214ENST00000637709 TBCKQ8TEA7 893 aa17.42■□□□□ 0.38
SCN8A-214ENST00000637709 SH3GLB2Q9NR46 395 aa17.42■□□□□ 0.38
SCN8A-214ENST00000637709 HOOK1Q9UJC3 728 aaKnown RBP17.42■□□□□ 0.38
SCN8A-214ENST00000637709 SMTNL1A8MU46 457 aa17.41■□□□□ 0.38
SCN8A-214ENST00000637709 UBASH3AP57075 661 aa17.41■□□□□ 0.38
SCN8A-214ENST00000637709 DPYDQ12882 1025 aa17.41■□□□□ 0.38
SCN8A-214ENST00000637709 CNKSR1Q969H4 720 aa17.41■□□□□ 0.38
SCN8A-214ENST00000637709 ZMYND12Q9H0C1 365 aa17.41■□□□□ 0.38
SCN8A-214ENST00000637709 IGKV6D-41A0A0C4DH26 115 aa17.41■□□□□ 0.38
SCN8A-214ENST00000637709 SKILP12757 684 aa17.41■□□□□ 0.38
SCN8A-214ENST00000637709 EEF2P13639 858 aaKnown RBP17.41■□□□□ 0.38
SCN8A-214ENST00000637709 E2F4Q16254 413 aa17.41■□□□□ 0.38
SCN8A-214ENST00000637709 SOGA3Q5TF21 947 aa17.41■□□□□ 0.38
SCN8A-214ENST00000637709 POTEDQ86YR6 584 aa17.41■□□□□ 0.38
SCN8A-214ENST00000637709 JMJD4Q9H9V9 463 aa17.41■□□□□ 0.38
SCN8A-214ENST00000637709 CDC25BP30305 580 aa17.4■□□□□ 0.38
SCN8A-214ENST00000637709 RRP1BQ14684 758 aaKnown RBP17.4■□□□□ 0.38
SCN8A-214ENST00000637709 ARMCX5Q6P1M9 558 aa17.4■□□□□ 0.38
SCN8A-214ENST00000637709 SAMD1Q6SPF0 538 aaPredicted RBP17.4■□□□□ 0.38
SCN8A-214ENST00000637709 SPICE1Q8N0Z3 855 aa17.4■□□□□ 0.38
SCN8A-214ENST00000637709 EEF2KMTQ96G04 330 aa17.4■□□□□ 0.38
SCN8A-214ENST00000637709 ZNF646O15015 1829 aaPredicted RBP17.4■□□□□ 0.38
SCN8A-214ENST00000637709 ZBTB7AO95365 584 aa17.4■□□□□ 0.38
SCN8A-214ENST00000637709 DPEP1P16444 411 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms