RNA–Protein interactions for RNA: ENST00000637692.1

CACNA1A-245, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 1,245 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-245ENST00000637692 IKQ13123 557 aaPredicted RBP17.27■□□□□ 0.36
CACNA1A-245ENST00000637692 STK3Q13188 491 aa17.27■□□□□ 0.36
CACNA1A-245ENST00000637692 CUL4AQ13619 759 aa17.27■□□□□ 0.36
CACNA1A-245ENST00000637692 TREML2Q5T2D2 321 aa17.27■□□□□ 0.36
CACNA1A-245ENST00000637692 SYDE2Q5VT97 1194 aa17.27■□□□□ 0.36
CACNA1A-245ENST00000637692 LBX2Q6XYB7 198 aa17.27■□□□□ 0.36
CACNA1A-245ENST00000637692 CCDC144CPQ8IYA2 1237 aa17.27■□□□□ 0.36
CACNA1A-245ENST00000637692 STAG2Q8N3U4 1231 aa17.27■□□□□ 0.36
CACNA1A-245ENST00000637692 RIOX1Q9H6W3 641 aa17.27■□□□□ 0.36
CACNA1A-245ENST00000637692 GPCPD1Q9NPB8 672 aa17.27■□□□□ 0.36
CACNA1A-245ENST00000637692 PPP1R9AQ9ULJ8 1098 aa17.27■□□□□ 0.36
CACNA1A-245ENST00000637692 PTPRFP10586 1907 aa17.27■□□□□ 0.35
CACNA1A-245ENST00000637692 WDR33Q9C0J8 1336 aaKnown RBP17.26■□□□□ 0.35
CACNA1A-245ENST00000637692 BTBD19C9JJ37 291 aa17.26■□□□□ 0.35
CACNA1A-245ENST00000637692 LARGE1O95461 756 aa17.26■□□□□ 0.35
CACNA1A-245ENST00000637692 ALDH1A1P00352 501 aa17.26■□□□□ 0.35
CACNA1A-245ENST00000637692 GOLGA8HP0CJ92 632 aa17.26■□□□□ 0.35
CACNA1A-245ENST00000637692 KIF23Q02241 960 aaPredicted RBP17.26■□□□□ 0.35
CACNA1A-245ENST00000637692 FUT2Q10981 343 aa17.26■□□□□ 0.35
CACNA1A-245ENST00000637692 DGKZQ13574 1117 aa17.26■□□□□ 0.35
CACNA1A-245ENST00000637692 NTRK3Q16288 839 aa17.26■□□□□ 0.35
CACNA1A-245ENST00000637692 RASGRP2Q7LDG7 609 aa17.26■□□□□ 0.35
CACNA1A-245ENST00000637692 RAB11FIP4Q86YS3 637 aa17.26■□□□□ 0.35
CACNA1A-245ENST00000637692 TRIM22Q8IYM9 498 aa17.26■□□□□ 0.35
CACNA1A-245ENST00000637692 MB21D1Q8N884 522 aa17.26■□□□□ 0.35
CACNA1A-245ENST00000637692 INTS4Q96HW7 963 aaKnown RBP17.26■□□□□ 0.35
CACNA1A-245ENST00000637692 RNF26Q9BY78 433 aaPredicted RBP17.26■□□□□ 0.35
CACNA1A-245ENST00000637692 NCOA5Q9HCD5 579 aaKnown RBP17.26■□□□□ 0.35
CACNA1A-245ENST00000637692 ADAMTS5Q9UNA0 930 aa17.26■□□□□ 0.35
CACNA1A-245ENST00000637692 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.26■□□□□ 0.35
CACNA1A-245ENST00000637692 STK36Q9NRP7 1315 aa17.25■□□□□ 0.35
CACNA1A-245ENST00000637692 PDHXO00330 501 aa17.25■□□□□ 0.35
CACNA1A-245ENST00000637692 PLEKHA8P1O95397 391 aa17.25■□□□□ 0.35
CACNA1A-245ENST00000637692 DSG3P32926 999 aa17.25■□□□□ 0.35
CACNA1A-245ENST00000637692 HMGN5P82970 282 aaKnown RBP17.25■□□□□ 0.35
CACNA1A-245ENST00000637692 SRBD1Q8N5C6 995 aaKnown RBP17.25■□□□□ 0.35
CACNA1A-245ENST00000637692 NECAB1Q8N987 351 aa17.25■□□□□ 0.35
CACNA1A-245ENST00000637692 MTMR8Q96EF0 704 aa17.25■□□□□ 0.35
CACNA1A-245ENST00000637692 RRP36Q96EU6 259 aaKnown RBP17.25■□□□□ 0.35
CACNA1A-245ENST00000637692 PARK7Q99497 189 aaKnown RBP17.25■□□□□ 0.35
CACNA1A-245ENST00000637692 ASCC2Q9H1I8 757 aaPredicted RBP17.25■□□□□ 0.35
CACNA1A-245ENST00000637692 PRR12Q9ULL5 1215 aa17.25■□□□□ 0.35
CACNA1A-245ENST00000637692 RBM19Q9Y4C8 960 aaKnown RBP17.25■□□□□ 0.35
CACNA1A-245ENST00000637692 GCLCP48506 637 aaPredicted RBP17.24■□□□□ 0.35
CACNA1A-245ENST00000637692 VEGFBP49765 207 aa17.24■□□□□ 0.35
CACNA1A-245ENST00000637692 OAZ1P54368 228 aa17.24■□□□□ 0.35
CACNA1A-245ENST00000637692 AKAP17AQ02040 695 aaKnown RBP17.24■□□□□ 0.35
CACNA1A-245ENST00000637692 TTBK2Q6IQ55 1244 aa17.24■□□□□ 0.35
CACNA1A-245ENST00000637692 IFNL1Q8IU54 200 aa17.24■□□□□ 0.35
CACNA1A-245ENST00000637692 CCDC83Q8IWF9 413 aa17.24■□□□□ 0.35
CACNA1A-245ENST00000637692 ADGRF4Q8IZF3 695 aa17.24■□□□□ 0.35
CACNA1A-245ENST00000637692 FAM177A1Q8N128 213 aaPredicted RBP17.24■□□□□ 0.35
CACNA1A-245ENST00000637692 PTPN18Q99952 460 aa17.24■□□□□ 0.35
CACNA1A-245ENST00000637692 RANBP17Q9H2T7 1088 aaKnown RBP17.24■□□□□ 0.35
CACNA1A-245ENST00000637692 JMJD4Q9H9V9 463 aa17.24■□□□□ 0.35
CACNA1A-245ENST00000637692 KIF3AQ9Y496 699 aa17.24■□□□□ 0.35
CACNA1A-245ENST00000637692 CNTNAP5Q8WYK1 1306 aa17.23■□□□□ 0.35
CACNA1A-245ENST00000637692 THSD7BQ9C0I4 1608 aa17.23■□□□□ 0.35
CACNA1A-245ENST00000637692 VWA5AO00534 786 aa17.23■□□□□ 0.35
CACNA1A-245ENST00000637692 ATP2A1O14983 1001 aa17.23■□□□□ 0.35
CACNA1A-245ENST00000637692 PRPF3O43395 683 aaKnown RBP17.23■□□□□ 0.35
CACNA1A-245ENST00000637692 CYTH3O43739 400 aa17.23■□□□□ 0.35
CACNA1A-245ENST00000637692 ZBED4O75132 1171 aa17.23■□□□□ 0.35
CACNA1A-245ENST00000637692 FMNL1O95466 1100 aaPredicted RBP17.23■□□□□ 0.35
CACNA1A-245ENST00000637692 SLC16A2P36021 539 aa17.23■□□□□ 0.35
CACNA1A-245ENST00000637692 HERVK_113P62684 666 aa17.23■□□□□ 0.35
CACNA1A-245ENST00000637692 SSRP1Q08945 709 aaKnown RBP17.23■□□□□ 0.35
CACNA1A-245ENST00000637692 NBPF11Q86T75 865 aa17.23■□□□□ 0.35
CACNA1A-245ENST00000637692 FAM43AQ8N2R8 423 aa17.23■□□□□ 0.35
CACNA1A-245ENST00000637692 NSUN7Q8NE18 718 aaKnown RBP17.23■□□□□ 0.35
CACNA1A-245ENST00000637692 SMARCC2Q8TAQ2 1214 aa17.23■□□□□ 0.35
CACNA1A-245ENST00000637692 WASF1Q92558 559 aa17.23■□□□□ 0.35
CACNA1A-245ENST00000637692 KIFC2Q96AC6 838 aa17.23■□□□□ 0.35
CACNA1A-245ENST00000637692 UBA5Q9GZZ9 404 aa17.23■□□□□ 0.35
CACNA1A-245ENST00000637692 SLC38A10Q9HBR0 1119 aa17.23■□□□□ 0.35
CACNA1A-245ENST00000637692 FBXO28Q9NVF7 368 aa17.23■□□□□ 0.35
CACNA1A-245ENST00000637692 SEC63Q9UGP8 760 aaKnown RBP17.23■□□□□ 0.35
CACNA1A-245ENST00000637692 PNMA6FA0A0J9YX94 578 aa17.22■□□□□ 0.35
CACNA1A-245ENST00000637692 SPDYE16A6NNV3 312 aaPredicted RBP17.22■□□□□ 0.35
CACNA1A-245ENST00000637692 hCG_1984214I3L0E3 225 aa17.22■□□□□ 0.35
CACNA1A-245ENST00000637692 IGF2BP3O00425 579 aaKnown RBP eCLIP17.22■□□□□ 0.35
CACNA1A-245ENST00000637692 ZBTB5O15062 677 aa17.22■□□□□ 0.35
CACNA1A-245ENST00000637692 DEXIO95424 95 aa17.22■□□□□ 0.35
CACNA1A-245ENST00000637692 ST3GAL1Q11201 340 aa17.22■□□□□ 0.35
CACNA1A-245ENST00000637692 GRM1Q13255 1194 aa17.22■□□□□ 0.35
CACNA1A-245ENST00000637692 TEX2Q8IWB9 1127 aa17.22■□□□□ 0.35
CACNA1A-245ENST00000637692 ZNF713Q8N859 430 aaPredicted RBP17.22■□□□□ 0.35
CACNA1A-245ENST00000637692 RABGAP1Q9Y3P9 1069 aa17.22■□□□□ 0.35
CACNA1A-245ENST00000637692 CTDP1Q9Y5B0 961 aaPredicted RBP17.22■□□□□ 0.35
CACNA1A-245ENST00000637692 PTPDC1A2A3K4 754 aa17.21■□□□□ 0.35
CACNA1A-245ENST00000637692 CTDNEP1O95476 244 aa17.21■□□□□ 0.35
CACNA1A-245ENST00000637692 HSP90AA1P07900 732 aaKnown RBP17.21■□□□□ 0.35
CACNA1A-245ENST00000637692 SLC35G1Q2M3R5 365 aa17.21■□□□□ 0.35
CACNA1A-245ENST00000637692 SMCR8Q8TEV9 937 aaPredicted RBP17.21■□□□□ 0.35
CACNA1A-245ENST00000637692 P2RX7Q99572 595 aaKnown RBP17.21■□□□□ 0.35
CACNA1A-245ENST00000637692 CFHR5Q9BXR6 569 aa17.21■□□□□ 0.35
CACNA1A-245ENST00000637692 SLC26A6Q9BXS9 759 aa17.21■□□□□ 0.35
CACNA1A-245ENST00000637692 V9GY48 417 aaPredicted RBP17.21■□□□□ 0.35
CACNA1A-245ENST00000637692 AOC2O75106 756 aa17.2■□□□□ 0.34
CACNA1A-245ENST00000637692 COPB2P35606 906 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms