RNA–Protein interactions for RNA: ENST00000637387.1

CTSD-211, Transcript of cathepsin D, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CTSD, Length 1,597 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-211ENST00000637387 RBM27Q9P2N5 1060 aaKnown RBP17.67■□□□□ 0.42
CTSD-211ENST00000637387 TMX2Q9Y320 296 aa17.67■□□□□ 0.42
CTSD-211ENST00000637387 RLFQ13129 1914 aa17.67■□□□□ 0.42
CTSD-211ENST00000637387 U2AF2P26368 475 aaKnown RBP eCLIP17.66■□□□□ 0.42
CTSD-211ENST00000637387 AKAP17AQ02040 695 aaKnown RBP17.66■□□□□ 0.42
CTSD-211ENST00000637387 GPATCH4Q5T3I0 446 aaKnown RBP17.66■□□□□ 0.42
CTSD-211ENST00000637387 SLFN13Q68D06 897 aa17.66■□□□□ 0.42
CTSD-211ENST00000637387 KCTD1Q719H9 257 aa17.66■□□□□ 0.42
CTSD-211ENST00000637387 PIBF1Q8WXW3 757 aa17.66■□□□□ 0.42
CTSD-211ENST00000637387 CCDC102AQ96A19 550 aa17.66■□□□□ 0.42
CTSD-211ENST00000637387 GMCL1Q96IK5 515 aa17.66■□□□□ 0.42
CTSD-211ENST00000637387 BEGAINQ9BUH8 593 aa17.66■□□□□ 0.42
CTSD-211ENST00000637387 UBA5Q9GZZ9 404 aa17.66■□□□□ 0.42
CTSD-211ENST00000637387 GPCPD1Q9NPB8 672 aa17.66■□□□□ 0.42
CTSD-211ENST00000637387 SMCHD1A6NHR9 2005 aa17.66■□□□□ 0.42
CTSD-211ENST00000637387 CTNND1O60716 968 aaKnown RBP17.66■□□□□ 0.42
CTSD-211ENST00000637387 DCAF15Q66K64 600 aa17.66■□□□□ 0.42
CTSD-211ENST00000637387 WWC2Q6AWC2 1192 aa17.66■□□□□ 0.42
CTSD-211ENST00000637387 GPKOWQ92917 476 aaPredicted RBP eCLIP17.66■□□□□ 0.42
CTSD-211ENST00000637387 ZNF341Q9BYN7 854 aa17.66■□□□□ 0.42
CTSD-211ENST00000637387 GOLGA6L22H0YM25 854 aa17.65■□□□□ 0.42
CTSD-211ENST00000637387 ADAMTS3O15072 1205 aa17.65■□□□□ 0.42
CTSD-211ENST00000637387 FIBPO43427 364 aa17.65■□□□□ 0.42
CTSD-211ENST00000637387 SLC10A3P09131 477 aa17.65■□□□□ 0.42
CTSD-211ENST00000637387 TRIM29Q14134 588 aa17.65■□□□□ 0.42
CTSD-211ENST00000637387 CCDC96Q2M329 555 aa17.65■□□□□ 0.42
CTSD-211ENST00000637387 MYSM1Q5VVJ2 828 aa17.65■□□□□ 0.42
CTSD-211ENST00000637387 BRAPQ7Z569 592 aa17.65■□□□□ 0.42
CTSD-211ENST00000637387 DIS3L2Q8IYB7 885 aaKnown RBP17.65■□□□□ 0.42
CTSD-211ENST00000637387 OXER1Q8TDS5 423 aa17.65■□□□□ 0.42
CTSD-211ENST00000637387 MTMR8Q96EF0 704 aa17.65■□□□□ 0.42
CTSD-211ENST00000637387 PIGSQ96S52 555 aa17.65■□□□□ 0.42
CTSD-211ENST00000637387 NUP88Q99567 741 aaPredicted RBP17.65■□□□□ 0.42
CTSD-211ENST00000637387 FTOQ9C0B1 505 aaKnown RBP eCLIP17.65■□□□□ 0.42
CTSD-211ENST00000637387 ARHGEF10LQ9HCE6 1279 aa17.65■□□□□ 0.42
CTSD-211ENST00000637387 GINM1Q9NU53 330 aa17.65■□□□□ 0.42
CTSD-211ENST00000637387 LOC285556D6RIA3 1793 aa17.64■□□□□ 0.41
CTSD-211ENST00000637387 BTBD18B2RXH4 712 aa17.64■□□□□ 0.41
CTSD-211ENST00000637387 STXBP3O00186 592 aa17.64■□□□□ 0.41
CTSD-211ENST00000637387 CA12O43570 354 aa17.64■□□□□ 0.41
CTSD-211ENST00000637387 ZNF157P51786 506 aaPredicted RBP17.64■□□□□ 0.41
CTSD-211ENST00000637387 KRT85P78386 507 aa17.64■□□□□ 0.41
CTSD-211ENST00000637387 TNFRSF25Q93038 417 aa17.64■□□□□ 0.41
CTSD-211ENST00000637387 USP28Q96RU2 1077 aa17.64■□□□□ 0.41
CTSD-211ENST00000637387 JMJD4Q9H9V9 463 aa17.64■□□□□ 0.41
CTSD-211ENST00000637387 PRPF40AO75400 957 aaKnown RBP17.63■□□□□ 0.41
CTSD-211ENST00000637387 SLC16A2P36021 539 aa17.63■□□□□ 0.41
CTSD-211ENST00000637387 SLC1A4P43007 532 aa17.63■□□□□ 0.41
CTSD-211ENST00000637387 NR5A1Q13285 461 aa17.63■□□□□ 0.41
CTSD-211ENST00000637387 ADGRF4Q8IZF3 695 aa17.63■□□□□ 0.41
CTSD-211ENST00000637387 HOOK2Q96ED9 719 aa17.63■□□□□ 0.41
CTSD-211ENST00000637387 WRNIP1Q96S55 665 aa17.63■□□□□ 0.41
CTSD-211ENST00000637387 ANP32EQ9BTT0 268 aa17.63■□□□□ 0.41
CTSD-211ENST00000637387 VCPKMTQ9H867 229 aa17.63■□□□□ 0.41
CTSD-211ENST00000637387 SH3GLB2Q9NR46 395 aa17.63■□□□□ 0.41
CTSD-211ENST00000637387 TFIP11Q9UBB9 837 aaKnown RBP17.63■□□□□ 0.41
CTSD-211ENST00000637387 COL11A1P12107 1806 aaPredicted RBP17.63■□□□□ 0.41
CTSD-211ENST00000637387 RBBP6Q7Z6E9 1792 aaKnown RBP17.62■□□□□ 0.41
CTSD-211ENST00000637387 PPP1R11O60927 126 aaPredicted RBP17.62■□□□□ 0.41
CTSD-211ENST00000637387 NCLP19338 710 aaKnown RBP17.62■□□□□ 0.41
CTSD-211ENST00000637387 MOB2Q70IA6 237 aa17.62■□□□□ 0.41
CTSD-211ENST00000637387 HOMER1Q86YM7 354 aa17.62■□□□□ 0.41
CTSD-211ENST00000637387 RASAL3Q86YV0 1011 aa17.62■□□□□ 0.41
CTSD-211ENST00000637387 SCYL3Q8IZE3 742 aa17.62■□□□□ 0.41
CTSD-211ENST00000637387 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.62■□□□□ 0.413e-12■□□□□ 10.8
CTSD-211ENST00000637387 RRP36Q96EU6 259 aaKnown RBP17.62■□□□□ 0.41
CTSD-211ENST00000637387 FOXP1Q9H334 677 aaPredicted RBP17.62■□□□□ 0.41
CTSD-211ENST00000637387 BARHL2Q9NY43 387 aa17.62■□□□□ 0.41
CTSD-211ENST00000637387 ELP1O95163 1332 aa17.62■□□□□ 0.41
CTSD-211ENST00000637387 GADD45BO75293 160 aaPredicted RBP17.62■□□□□ 0.41
CTSD-211ENST00000637387 XBP1P17861 261 aa17.62■□□□□ 0.41
CTSD-211ENST00000637387 EARS2Q5JPH6 523 aaKnown RBP17.62■□□□□ 0.41
CTSD-211ENST00000637387 BTNL9Q6UXG8 535 aa17.62■□□□□ 0.41
CTSD-211ENST00000637387 NOSTRINQ8IVI9 506 aa17.62■□□□□ 0.41
CTSD-211ENST00000637387 SPICE1Q8N0Z3 855 aa17.62■□□□□ 0.41
CTSD-211ENST00000637387 ZKSCAN4Q969J2 545 aaPredicted RBP17.62■□□□□ 0.41
CTSD-211ENST00000637387 TSKSQ9UJT2 592 aa17.62■□□□□ 0.41
CTSD-211ENST00000637387 FAM205CA6NFA0 338 aa17.61■□□□□ 0.41
CTSD-211ENST00000637387 USP17L10C9JJH3 530 aa17.61■□□□□ 0.41
CTSD-211ENST00000637387 M0R2N6 131 aa17.61■□□□□ 0.41
CTSD-211ENST00000637387 USP2O75604 605 aaPredicted RBP17.61■□□□□ 0.41
CTSD-211ENST00000637387 BMP3P12645 472 aa17.61■□□□□ 0.41
CTSD-211ENST00000637387 PTMSP20962 102 aa17.61■□□□□ 0.41
CTSD-211ENST00000637387 NOM1Q5C9Z4 860 aaKnown RBP17.61■□□□□ 0.41
CTSD-211ENST00000637387 NOL9Q5SY16 702 aaKnown RBP17.61■□□□□ 0.41
CTSD-211ENST00000637387 GPT2Q8TD30 523 aa17.61■□□□□ 0.41
CTSD-211ENST00000637387 LEO1Q8WVC0 666 aaPredicted RBP17.61■□□□□ 0.41
CTSD-211ENST00000637387 VAT1LQ9HCJ6 419 aa17.61■□□□□ 0.41
CTSD-211ENST00000637387 GOPCQ9HD26 462 aa17.61■□□□□ 0.41
CTSD-211ENST00000637387 RAD21O60216 631 aa17.6■□□□□ 0.41
CTSD-211ENST00000637387 TRAK2O60296 914 aa17.6■□□□□ 0.41
CTSD-211ENST00000637387 KRT2P35908 639 aa17.6■□□□□ 0.41
CTSD-211ENST00000637387 SUPT20HL1Q3ZLR7 823 aa17.6■□□□□ 0.41
CTSD-211ENST00000637387 ATL3Q6DD88 541 aa17.6■□□□□ 0.41
CTSD-211ENST00000637387 HEATR3Q7Z4Q2 680 aa17.6■□□□□ 0.41
CTSD-211ENST00000637387 DAGLBQ8NCG7 672 aa17.6■□□□□ 0.41
CTSD-211ENST00000637387 SH2D4AQ9H788 454 aa17.6■□□□□ 0.41
CTSD-211ENST00000637387 MYH7BA7E2Y1 1941 aa17.6■□□□□ 0.41
CTSD-211ENST00000637387 hCG_1984214I3L0E3 225 aa17.59■□□□□ 0.41
CTSD-211ENST00000637387 PTPRAP18433 802 aa17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms