RNA–Protein interactions for RNA: ENST00000637285.1

SCN1A-215, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5

Gene SCN1A, Length 100 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-215ENST00000637285 RPS26P62854 115 aaKnown RBP2.98□□□□□ -1.93
SCN1A-215ENST00000637285 CAP1Q01518 475 aa2.98□□□□□ -1.93
SCN1A-215ENST00000637285 TSNAXIP1Q2TAA8 658 aa2.98□□□□□ -1.93
SCN1A-215ENST00000637285 ZC3H14Q6PJT7 736 aaKnown RBP2.98□□□□□ -1.93
SCN1A-215ENST00000637285 RPTNQ6XPR3 784 aa2.98□□□□□ -1.93
SCN1A-215ENST00000637285 CCDC82Q8N4S0 544 aa2.98□□□□□ -1.93
SCN1A-215ENST00000637285 RETREG2Q8NC44 543 aa2.98□□□□□ -1.93
SCN1A-215ENST00000637285 ENOX1Q8TC92 643 aaKnown RBP2.98□□□□□ -1.93
SCN1A-215ENST00000637285 SYTL5Q8TDW5 730 aaPredicted RBP2.98□□□□□ -1.93
SCN1A-215ENST00000637285 FNIP1Q8TF40 1166 aa2.98□□□□□ -1.93
SCN1A-215ENST00000637285 CCDC74BQ96LY2 380 aa2.98□□□□□ -1.93
SCN1A-215ENST00000637285 HDAC8Q9BY41 377 aa2.98□□□□□ -1.93
SCN1A-215ENST00000637285 PRDM14Q9GZV8 571 aa2.98□□□□□ -1.93
SCN1A-215ENST00000637285 C12orf49Q9H741 205 aa2.98□□□□□ -1.93
SCN1A-215ENST00000637285 TNFRSF10DQ9UBN6 386 aa2.98□□□□□ -1.93
SCN1A-215ENST00000637285 FAM8A1Q9UBU6 413 aa2.98□□□□□ -1.93
SCN1A-215ENST00000637285 KLHL3Q9UH77 587 aa2.98□□□□□ -1.93
SCN1A-215ENST00000637285 DCTN4Q9UJW0 460 aa2.98□□□□□ -1.93
SCN1A-215ENST00000637285 WWC3Q9ULE0 1092 aa2.98□□□□□ -1.93
SCN1A-215ENST00000637285 SPG7Q9UQ90 795 aa2.98□□□□□ -1.93
SCN1A-215ENST00000637285 PMF1-BGLAPU3KQ54 211 aa2.98□□□□□ -1.93
SCN1A-215ENST00000637285 FADS2P1A8MWK0 482 aa2.97□□□□□ -1.93
SCN1A-215ENST00000637285 CHURC1-FNTBB4DL54 471 aa2.97□□□□□ -1.93
SCN1A-215ENST00000637285 C1QTNF3-AMACRE9PGA6 284 aa2.97□□□□□ -1.93
SCN1A-215ENST00000637285 NOBOXO60393 691 aa2.97□□□□□ -1.93
SCN1A-215ENST00000637285 PLA2G1BP04054 148 aaKnown RBP2.97□□□□□ -1.93
SCN1A-215ENST00000637285 MAPK1P28482 360 aa2.97□□□□□ -1.93
SCN1A-215ENST00000637285 GJA9P57773 515 aa2.97□□□□□ -1.93
SCN1A-215ENST00000637285 FOXO4P98177 505 aa2.97□□□□□ -1.93
SCN1A-215ENST00000637285 RPL6Q02878 288 aaKnown RBP2.97□□□□□ -1.93
SCN1A-215ENST00000637285 CBX2Q14781 532 aaPredicted RBP2.97□□□□□ -1.93
SCN1A-215ENST00000637285 TARBP2Q15633 366 aaKnown RBP2.97□□□□□ -1.93
SCN1A-215ENST00000637285 BBS9Q3SYG4 887 aa2.97□□□□□ -1.93
SCN1A-215ENST00000637285 PLEKHN1Q494U1 663 aaPredicted RBP2.97□□□□□ -1.93
SCN1A-215ENST00000637285 ALG1LQ6GMV1 187 aa2.97□□□□□ -1.93
SCN1A-215ENST00000637285 AGMOQ6ZNB7 445 aa2.97□□□□□ -1.93
SCN1A-215ENST00000637285 TMC3Q7Z5M5 1100 aa2.97□□□□□ -1.93
SCN1A-215ENST00000637285 SPRED1Q7Z699 444 aa2.97□□□□□ -1.93
SCN1A-215ENST00000637285 TXNDC2Q86VQ3 553 aa2.97□□□□□ -1.93
SCN1A-215ENST00000637285 PHACTR4Q8IZ21 702 aa2.97□□□□□ -1.93
SCN1A-215ENST00000637285 DAGLBQ8NCG7 672 aa2.97□□□□□ -1.93
SCN1A-215ENST00000637285 LINC00116Q8NCU8 138 aa2.97□□□□□ -1.93
SCN1A-215ENST00000637285 CHST13Q8NET6 341 aa2.97□□□□□ -1.93
SCN1A-215ENST00000637285 SH3RF3Q8TEJ3 882 aaPredicted RBP2.97□□□□□ -1.93
SCN1A-215ENST00000637285 RBM15Q96T37 977 aaKnown RBP eCLIP2.97□□□□□ -1.93
SCN1A-215ENST00000637285 KRTAP3-1Q9BYR8 98 aa2.97□□□□□ -1.93
SCN1A-215ENST00000637285 LNPKQ9C0E8 428 aa2.97□□□□□ -1.93
SCN1A-215ENST00000637285 TNFRSF12AQ9NP84 129 aa2.97□□□□□ -1.93
SCN1A-215ENST00000637285 FAN1Q9Y2M0 1017 aa2.97□□□□□ -1.93
SCN1A-215ENST00000637285 IRS2Q9Y4H2 1338 aa2.96□□□□□ -1.93
SCN1A-215ENST00000637285 A0A1W2PQ27 194 aa2.96□□□□□ -1.94
SCN1A-215ENST00000637285 A0A1W2PQ64 194 aa2.96□□□□□ -1.94
SCN1A-215ENST00000637285 A0A1W2PQC6 194 aa2.96□□□□□ -1.94
SCN1A-215ENST00000637285 A0A1W2PQD8 194 aa2.96□□□□□ -1.94
SCN1A-215ENST00000637285 CYR61O00622 381 aa2.96□□□□□ -1.94
SCN1A-215ENST00000637285 TFE3P19532 575 aaPredicted RBP2.96□□□□□ -1.94
SCN1A-215ENST00000637285 GBP1P32455 592 aa2.96□□□□□ -1.94
SCN1A-215ENST00000637285 MAPKAPK2P49137 400 aa2.96□□□□□ -1.94
SCN1A-215ENST00000637285 LIG3P49916 1009 aa2.96□□□□□ -1.94
SCN1A-215ENST00000637285 SAPCD2Q86UD0 394 aa2.96□□□□□ -1.94
SCN1A-215ENST00000637285 SLFN12Q8IYM2 578 aa2.96□□□□□ -1.94
SCN1A-215ENST00000637285 Q8N1X5 172 aa2.96□□□□□ -1.94
SCN1A-215ENST00000637285 ZNF655Q8N720 491 aaPredicted RBP2.96□□□□□ -1.94
SCN1A-215ENST00000637285 FCRL2Q96LA5 508 aaPredicted RBP2.96□□□□□ -1.94
SCN1A-215ENST00000637285 KIF2CQ99661 725 aa2.96□□□□□ -1.94
SCN1A-215ENST00000637285 IMPACTQ9P2X3 320 aa2.96□□□□□ -1.94
SCN1A-215ENST00000637285 USTQ9Y2C2 406 aa2.96□□□□□ -1.94
SCN1A-215ENST00000637285 SH3D21A4FU49 640 aa2.95□□□□□ -1.94
SCN1A-215ENST00000637285 SOWAHDA6NJG2 315 aa2.95□□□□□ -1.94
SCN1A-215ENST00000637285 MEIS1O00470 390 aa2.95□□□□□ -1.94
SCN1A-215ENST00000637285 BPNT1O95861 308 aa2.95□□□□□ -1.94
SCN1A-215ENST00000637285 ATF2P15336 505 aa2.95□□□□□ -1.94
SCN1A-215ENST00000637285 FBLN1P23142 703 aa2.95□□□□□ -1.94
SCN1A-215ENST00000637285 ACVRL1P37023 503 aa2.95□□□□□ -1.94
SCN1A-215ENST00000637285 ATP2B2Q01814 1243 aa2.95□□□□□ -1.94
SCN1A-215ENST00000637285 SNW1Q13573 536 aaKnown RBP2.95□□□□□ -1.94
SCN1A-215ENST00000637285 NR1I3Q14994 352 aa2.95□□□□□ -1.94
SCN1A-215ENST00000637285 TMEM201Q5SNT2 666 aa2.95□□□□□ -1.94
SCN1A-215ENST00000637285 DIEXFQ68CQ4 756 aaKnown RBP2.95□□□□□ -1.94
SCN1A-215ENST00000637285 USP51Q70EK9 711 aa2.95□□□□□ -1.94
SCN1A-215ENST00000637285 CARFQ8N187 725 aa2.95□□□□□ -1.94
SCN1A-215ENST00000637285 SAMD11Q96NU1 681 aa2.95□□□□□ -1.94
SCN1A-215ENST00000637285 CDADC1Q9BWV3 514 aa2.95□□□□□ -1.94
SCN1A-215ENST00000637285 C1QTNF3Q9BXJ4 246 aa2.95□□□□□ -1.94
SCN1A-215ENST00000637285 ACSL6Q9UKU0 697 aa2.95□□□□□ -1.94
SCN1A-215ENST00000637285 PLA2G2DQ9UNK4 145 aa2.95□□□□□ -1.94
SCN1A-215ENST00000637285 MINPP1Q9UNW1 487 aa2.95□□□□□ -1.94
SCN1A-215ENST00000637285 TLR6Q9Y2C9 796 aa2.95□□□□□ -1.94
SCN1A-215ENST00000637285 HCFC2Q9Y5Z7 792 aa2.95□□□□□ -1.94
SCN1A-215ENST00000637285 A0A1W2PQ45 241 aaPredicted RBP2.94□□□□□ -1.94
SCN1A-215ENST00000637285 A0A1W2PQY0 241 aa2.94□□□□□ -1.94
SCN1A-215ENST00000637285 PRAMEF1O95521 474 aa2.94□□□□□ -1.94
SCN1A-215ENST00000637285 MC3RP41968 323 aa2.94□□□□□ -1.94
SCN1A-215ENST00000637285 SLCO6A1Q86UG4 719 aa2.94□□□□□ -1.94
SCN1A-215ENST00000637285 TTC9BQ8N6N2 239 aa2.94□□□□□ -1.94
SCN1A-215ENST00000637285 DVL3Q92997 716 aaPredicted RBP2.94□□□□□ -1.94
SCN1A-215ENST00000637285 KISS1RQ969F8 398 aaPredicted RBP2.94□□□□□ -1.94
SCN1A-215ENST00000637285 EAF1Q96JC9 268 aaPredicted RBP2.94□□□□□ -1.94
SCN1A-215ENST00000637285 JMJD8Q96S16 334 aa2.94□□□□□ -1.94
SCN1A-215ENST00000637285 ERVK13-1Q9NX77 482 aa2.94□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms