RNA–Protein interactions for RNA: ENST00000637212.1

LINC00643-207, long intergenic non-protein coding RNA 643, humanhuman

BASIC

Gene LINC00643, Length 734 nt, Biotype transcribed unitary pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00643-207ENST00000637212 A0A0G2JLL6 359 aaPredicted RBP15.47■□□□□ 0.07
LINC00643-207ENST00000637212 H3BQV1 296 aa15.47■□□□□ 0.07
LINC00643-207ENST00000637212 hCG_1984214I3L0E3 225 aa15.47■□□□□ 0.07
LINC00643-207ENST00000637212 IRF6O14896 467 aa15.47■□□□□ 0.07
LINC00643-207ENST00000637212 BRD1O95696 1058 aa15.47■□□□□ 0.07
LINC00643-207ENST00000637212 VCAM1P19320 739 aa15.47■□□□□ 0.07
LINC00643-207ENST00000637212 SLC16A2P36021 539 aa15.47■□□□□ 0.07
LINC00643-207ENST00000637212 HMGCS2P54868 508 aa15.47■□□□□ 0.07
LINC00643-207ENST00000637212 IFFO2Q5TF58 517 aa15.47■□□□□ 0.07
LINC00643-207ENST00000637212 FASTKD5Q7L8L6 764 aaKnown RBP15.47■□□□□ 0.07
LINC00643-207ENST00000637212 RASGRP2Q7LDG7 609 aa15.47■□□□□ 0.07
LINC00643-207ENST00000637212 PRRT2Q7Z6L0 340 aaPredicted RBP15.47■□□□□ 0.07
LINC00643-207ENST00000637212 ZNF713Q8N859 430 aaPredicted RBP15.47■□□□□ 0.07
LINC00643-207ENST00000637212 PRPF38AQ8NAV1 312 aaKnown RBP15.47■□□□□ 0.07
LINC00643-207ENST00000637212 OTUD5Q96G74 571 aa15.47■□□□□ 0.07
LINC00643-207ENST00000637212 HOXC10Q9NYD6 342 aa15.47■□□□□ 0.07
LINC00643-207ENST00000637212 ISY1Q9ULR0 285 aaKnown RBP15.47■□□□□ 0.07
LINC00643-207ENST00000637212 POLR2AP24928 1970 aaKnown RBP15.47■□□□□ 0.07
LINC00643-207ENST00000637212 USP17L15C9J2P7 530 aa15.46■□□□□ 0.07
LINC00643-207ENST00000637212 USP17L13C9JLJ4 530 aa15.46■□□□□ 0.07
LINC00643-207ENST00000637212 USP17L11C9JVI0 530 aa15.46■□□□□ 0.07
LINC00643-207ENST00000637212 USP17L18D6R9N7 530 aa15.46■□□□□ 0.07
LINC00643-207ENST00000637212 USP17L22D6RA61 530 aa15.46■□□□□ 0.07
LINC00643-207ENST00000637212 USP17L17D6RBQ6 530 aa15.46■□□□□ 0.07
LINC00643-207ENST00000637212 USP17L19D6RCP7 530 aa15.46■□□□□ 0.07
LINC00643-207ENST00000637212 USP17L20D6RJB6 530 aa15.46■□□□□ 0.07
LINC00643-207ENST00000637212 ZBTB5O15062 677 aa15.46■□□□□ 0.07
LINC00643-207ENST00000637212 DTNBO60941 627 aa15.46■□□□□ 0.07
LINC00643-207ENST00000637212 PPFIA3O75145 1194 aa15.46■□□□□ 0.07
LINC00643-207ENST00000637212 ZSCAN22P10073 491 aaPredicted RBP15.46■□□□□ 0.07
LINC00643-207ENST00000637212 HOXA7P31268 230 aaPredicted RBP15.46■□□□□ 0.07
LINC00643-207ENST00000637212 USP17L24Q0WX57 530 aa15.46■□□□□ 0.07
LINC00643-207ENST00000637212 IKQ13123 557 aaPredicted RBP15.46■□□□□ 0.07
LINC00643-207ENST00000637212 SNAPC2Q13487 334 aa15.46■□□□□ 0.07
LINC00643-207ENST00000637212 CATSPERGQ6ZRH7 1159 aa15.46■□□□□ 0.07
LINC00643-207ENST00000637212 CNKSR2Q8WXI2 1034 aa15.46■□□□□ 0.07
LINC00643-207ENST00000637212 PIGSQ96S52 555 aa15.46■□□□□ 0.07
LINC00643-207ENST00000637212 PNMA2Q9UL42 364 aa15.46■□□□□ 0.07
LINC00643-207ENST00000637212 PRR12Q9ULL5 1215 aa15.46■□□□□ 0.07
LINC00643-207ENST00000637212 MTMR6Q9Y217 621 aa15.46■□□□□ 0.07
LINC00643-207ENST00000637212 ZBTB48P10074 688 aaPredicted RBP15.45■□□□□ 0.06
LINC00643-207ENST00000637212 GTF2A2P52657 109 aa15.45■□□□□ 0.06
LINC00643-207ENST00000637212 HUNKP57058 714 aa15.45■□□□□ 0.06
LINC00643-207ENST00000637212 COG2Q14746 738 aa15.45■□□□□ 0.06
LINC00643-207ENST00000637212 GALNT17Q6IS24 598 aa15.45■□□□□ 0.06
LINC00643-207ENST00000637212 CCDC12Q8WUD4 166 aaPredicted RBP15.45■□□□□ 0.06
LINC00643-207ENST00000637212 WNK4Q96J92 1243 aa15.45■□□□□ 0.06
LINC00643-207ENST00000637212 SLF1Q9BQI6 1058 aa15.45■□□□□ 0.06
LINC00643-207ENST00000637212 CPVLQ9H3G5 476 aa15.45■□□□□ 0.06
LINC00643-207ENST00000637212 RPAP3Q9H6T3 665 aaPredicted RBP15.45■□□□□ 0.06
LINC00643-207ENST00000637212 BARHL2Q9NY43 387 aa15.45■□□□□ 0.06
LINC00643-207ENST00000637212 ZDHHC9Q9Y397 364 aa15.45■□□□□ 0.06
LINC00643-207ENST00000637212 hCG_1642624A0A1W2PR95 340 aa15.44■□□□□ 0.06
LINC00643-207ENST00000637212 CETPP11597 493 aa15.44■□□□□ 0.06
LINC00643-207ENST00000637212 CALML3P27482 149 aa15.44■□□□□ 0.06
LINC00643-207ENST00000637212 APLP1P51693 650 aa15.44■□□□□ 0.06
LINC00643-207ENST00000637212 SAFBQ15424 915 aaKnown RBP eCLIP15.44■□□□□ 0.06
LINC00643-207ENST00000637212 SPRYD7Q5W111 196 aa15.44■□□□□ 0.06
LINC00643-207ENST00000637212 KRT40Q6A162 431 aa15.44■□□□□ 0.06
LINC00643-207ENST00000637212 SAPCD2Q86UD0 394 aa15.44■□□□□ 0.06
LINC00643-207ENST00000637212 TEX2Q8IWB9 1127 aa15.44■□□□□ 0.06
LINC00643-207ENST00000637212 KIFC2Q96AC6 838 aa15.44■□□□□ 0.06
LINC00643-207ENST00000637212 HHIPL1Q96JK4 782 aa15.44■□□□□ 0.06
LINC00643-207ENST00000637212 AIFM3Q96NN9 605 aa15.44■□□□□ 0.06
LINC00643-207ENST00000637212 TANGO6Q9C0B7 1094 aa15.44■□□□□ 0.06
LINC00643-207ENST00000637212 RANBP17Q9H2T7 1088 aaKnown RBP15.44■□□□□ 0.06
LINC00643-207ENST00000637212 ZSCAN16Q9H4T2 348 aaPredicted RBP15.44■□□□□ 0.06
LINC00643-207ENST00000637212 PPP1R9AQ9ULJ8 1098 aa15.44■□□□□ 0.06
LINC00643-207ENST00000637212 ADAMTS5Q9UNA0 930 aa15.44■□□□□ 0.06
LINC00643-207ENST00000637212 MYPNQ86TC9 1320 aa15.43■□□□□ 0.06
LINC00643-207ENST00000637212 TMEM88BA6NKF7 163 aa15.43■□□□□ 0.06
LINC00643-207ENST00000637212 FLOT1O75955 427 aa15.43■□□□□ 0.06
LINC00643-207ENST00000637212 DSG3P32926 999 aa15.43■□□□□ 0.06
LINC00643-207ENST00000637212 GJA5P36382 358 aa15.43■□□□□ 0.06
LINC00643-207ENST00000637212 PABPC4Q13310 644 aaKnown RBP eCLIP15.43■□□□□ 0.06
LINC00643-207ENST00000637212 PKP1Q13835 747 aa15.43■□□□□ 0.06
LINC00643-207ENST00000637212 CDC37Q16543 378 aaPredicted RBP15.43■□□□□ 0.06
LINC00643-207ENST00000637212 PPP1R18Q6NYC8 613 aa15.43■□□□□ 0.06
LINC00643-207ENST00000637212 HOMER1Q86YM7 354 aa15.43■□□□□ 0.06
LINC00643-207ENST00000637212 CCDC148Q8NFR7 591 aa15.43■□□□□ 0.06
LINC00643-207ENST00000637212 PIBF1Q8WXW3 757 aa15.43■□□□□ 0.06
LINC00643-207ENST00000637212 PHF20Q9BVI0 1012 aa15.43■□□□□ 0.06
LINC00643-207ENST00000637212 AMNQ9BXJ7 453 aa15.43■□□□□ 0.06
LINC00643-207ENST00000637212 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.43■□□□□ 0.06
LINC00643-207ENST00000637212 ATP6V1DQ9Y5K8 247 aa15.43■□□□□ 0.06
LINC00643-207ENST00000637212 TLL2Q9Y6L7 1015 aa15.43■□□□□ 0.06
LINC00643-207ENST00000637212 PAPPA2Q9BXP8 1791 aa15.43■□□□□ 0.06
LINC00643-207ENST00000637212 VPS37CA5D8V6 355 aaPredicted RBP15.42■□□□□ 0.06
LINC00643-207ENST00000637212 STXBP3O00186 592 aa15.42■□□□□ 0.06
LINC00643-207ENST00000637212 ZBED4O75132 1171 aa15.42■□□□□ 0.06
LINC00643-207ENST00000637212 MMP1P03956 469 aa15.42■□□□□ 0.06
LINC00643-207ENST00000637212 NLRP5P59047 1200 aa15.42■□□□□ 0.06
LINC00643-207ENST00000637212 MAPK8IP2Q13387 824 aaPredicted RBP15.42■□□□□ 0.06
LINC00643-207ENST00000637212 MOGSQ13724 837 aa15.42■□□□□ 0.06
LINC00643-207ENST00000637212 QRICH1Q2TAL8 776 aa15.42■□□□□ 0.06
LINC00643-207ENST00000637212 WWC2Q6AWC2 1192 aa15.42■□□□□ 0.06
LINC00643-207ENST00000637212 RGMBQ6NW40 437 aa15.42■□□□□ 0.06
LINC00643-207ENST00000637212 HEATR3Q7Z4Q2 680 aa15.42■□□□□ 0.06
LINC00643-207ENST00000637212 FBXO11Q86XK2 927 aa15.42■□□□□ 0.06
LINC00643-207ENST00000637212 CCDC102AQ96A19 550 aa15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms