RNA–Protein interactions for RNA: ENST00000637156.1

CLN8-213, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLN8, Length 1,897 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-213ENST00000637156 PNMA6FA0A0J9YX94 578 aa24.27■■□□□ 1.48
CLN8-213ENST00000637156 NLRP5P59047 1200 aa24.27■■□□□ 1.48
CLN8-213ENST00000637156 SPP2Q13103 211 aa24.27■■□□□ 1.48
CLN8-213ENST00000637156 GNL2Q13823 731 aaKnown RBP24.27■■□□□ 1.48
CLN8-213ENST00000637156 FAM83BQ5T0W9 1011 aa24.27■■□□□ 1.48
CLN8-213ENST00000637156 NOSTRINQ8IVI9 506 aa24.27■■□□□ 1.48
CLN8-213ENST00000637156 TMEM87AQ8NBN3 555 aa24.27■■□□□ 1.48
CLN8-213ENST00000637156 USP28Q96RU2 1077 aa24.27■■□□□ 1.48
CLN8-213ENST00000637156 WDR18Q9BV38 432 aa24.27■■□□□ 1.48
CLN8-213ENST00000637156 FTOQ9C0B1 505 aaKnown RBP eCLIP24.27■■□□□ 1.48
CLN8-213ENST00000637156 ZHX2Q9Y6X8 837 aa24.27■■□□□ 1.48
CLN8-213ENST00000637156 PPP1R11O60927 126 aaPredicted RBP24.26■■□□□ 1.47
CLN8-213ENST00000637156 MAP3K9P80192 1104 aa24.26■■□□□ 1.47
CLN8-213ENST00000637156 NOL9Q5SY16 702 aaKnown RBP24.26■■□□□ 1.47
CLN8-213ENST00000637156 FEZ1Q99689 392 aa24.26■■□□□ 1.47
CLN8-213ENST00000637156 CFAP45Q9UL16 551 aa24.26■■□□□ 1.47
CLN8-213ENST00000637156 MYH6P13533 1939 aa24.26■■□□□ 1.47
CLN8-213ENST00000637156 TCHHQ07283 1943 aa24.26■■□□□ 1.47
CLN8-213ENST00000637156 ZBTB5O15062 677 aa24.26■■□□□ 1.47
CLN8-213ENST00000637156 KRT2P35908 639 aa24.26■■□□□ 1.47
CLN8-213ENST00000637156 CEBPZQ03701 1054 aaKnown RBP24.26■■□□□ 1.47
CLN8-213ENST00000637156 DGKZQ13574 1117 aa24.26■■□□□ 1.47
CLN8-213ENST00000637156 ATL3Q6DD88 541 aa24.26■■□□□ 1.47
CLN8-213ENST00000637156 TRAK2O60296 914 aa24.25■■□□□ 1.47
CLN8-213ENST00000637156 ZNF396Q96N95 335 aaPredicted RBP24.25■■□□□ 1.47
CLN8-213ENST00000637156 SCAND2PQ9GZW5 306 aaPredicted RBP24.25■■□□□ 1.47
CLN8-213ENST00000637156 GADD45BO75293 160 aaPredicted RBP24.24■■□□□ 1.47
CLN8-213ENST00000637156 EARS2Q5JPH6 523 aaKnown RBP24.24■■□□□ 1.47
CLN8-213ENST00000637156 MAP1SQ66K74 1059 aaPredicted RBP24.24■■□□□ 1.47
CLN8-213ENST00000637156 ZNF280CQ8ND82 737 aa24.24■■□□□ 1.47
CLN8-213ENST00000637156 LEO1Q8WVC0 666 aaPredicted RBP24.24■■□□□ 1.47
CLN8-213ENST00000637156 TNFRSF25Q93038 417 aa24.24■■□□□ 1.47
CLN8-213ENST00000637156 COA7Q96BR5 231 aa24.24■■□□□ 1.47
CLN8-213ENST00000637156 EMILIN3Q9NT22 766 aa24.24■■□□□ 1.47
CLN8-213ENST00000637156 DCAF8L1A6NGE4 600 aa24.24■■□□□ 1.47
CLN8-213ENST00000637156 BACE1P56817 501 aa24.24■■□□□ 1.47
CLN8-213ENST00000637156 MTMR2Q13614 643 aa24.24■■□□□ 1.47
CLN8-213ENST00000637156 VGLL4Q14135 290 aa24.24■■□□□ 1.47
CLN8-213ENST00000637156 SYDE2Q5VT97 1194 aa24.24■■□□□ 1.47
CLN8-213ENST00000637156 MOB2Q70IA6 237 aa24.24■■□□□ 1.47
CLN8-213ENST00000637156 ZMYND12Q9H0C1 365 aa24.24■■□□□ 1.47
CLN8-213ENST00000637156 RCOR1Q9UKL0 485 aa24.24■■□□□ 1.47
CLN8-213ENST00000637156 PRR12Q9ULL5 1215 aa24.24■■□□□ 1.47
CLN8-213ENST00000637156 PCDHA4Q9UN74 947 aa24.24■■□□□ 1.47
CLN8-213ENST00000637156 PTMSP20962 102 aa24.23■■□□□ 1.47
CLN8-213ENST00000637156 CALML3P27482 149 aa24.23■■□□□ 1.47
CLN8-213ENST00000637156 STAT2P52630 851 aa24.23■■□□□ 1.47
CLN8-213ENST00000637156 SNAP25P60880 206 aa24.23■■□□□ 1.47
CLN8-213ENST00000637156 IKQ13123 557 aaPredicted RBP24.23■■□□□ 1.47
CLN8-213ENST00000637156 QRICH1Q2TAL8 776 aa24.23■■□□□ 1.47
CLN8-213ENST00000637156 FAM177A1Q8N128 213 aaPredicted RBP24.23■■□□□ 1.47
CLN8-213ENST00000637156 AS3MTQ9HBK9 375 aa24.23■■□□□ 1.47
CLN8-213ENST00000637156 CLIC4Q9Y696 253 aa24.23■■□□□ 1.47
CLN8-213ENST00000637156 SNCAIPQ9Y6H5 919 aa24.23■■□□□ 1.47
CLN8-213ENST00000637156 M0R2N6 131 aa24.22■■□□□ 1.47
CLN8-213ENST00000637156 NF2P35240 595 aa24.22■■□□□ 1.47
CLN8-213ENST00000637156 TOB1P50616 345 aaPredicted RBP24.22■■□□□ 1.47
CLN8-213ENST00000637156 NAPAP54920 295 aa24.22■■□□□ 1.47
CLN8-213ENST00000637156 NOM1Q5C9Z4 860 aaKnown RBP24.22■■□□□ 1.47
CLN8-213ENST00000637156 BLIDQ8IZY5 108 aa24.22■■□□□ 1.47
CLN8-213ENST00000637156 CCDC148Q8NFR7 591 aa24.22■■□□□ 1.47
CLN8-213ENST00000637156 LPAR1Q92633 364 aa24.22■■□□□ 1.47
CLN8-213ENST00000637156 SPATA32Q96LK8 384 aa24.22■■□□□ 1.47
CLN8-213ENST00000637156 RTEL1Q9NZ71 1219 aa24.22■■□□□ 1.47
CLN8-213ENST00000637156 AFG3L2Q9Y4W6 797 aa24.22■■□□□ 1.47
CLN8-213ENST00000637156 ATAD5Q96QE3 1844 aa24.22■■□□□ 1.47
CLN8-213ENST00000637156 SMCO2A6NFE2 343 aa24.21■■□□□ 1.47
CLN8-213ENST00000637156 TRIM75PA6NK02 468 aa24.21■■□□□ 1.47
CLN8-213ENST00000637156 PLA2G6O60733 806 aa24.21■■□□□ 1.47
CLN8-213ENST00000637156 IREB2P48200 963 aaKnown RBP24.21■■□□□ 1.47
CLN8-213ENST00000637156 FMR1Q06787 632 aaKnown RBP eCLIP24.21■■□□□ 1.47
CLN8-213ENST00000637156 CDC37Q16543 378 aaPredicted RBP24.21■■□□□ 1.47
CLN8-213ENST00000637156 BRMS1Q9HCU9 246 aa24.21■■□□□ 1.47
CLN8-213ENST00000637156 FAM205CA6NFA0 338 aa24.21■■□□□ 1.47
CLN8-213ENST00000637156 hCG_1984214I3L0E3 225 aa24.21■■□□□ 1.47
CLN8-213ENST00000637156 GALNT17Q6IS24 598 aa24.21■■□□□ 1.47
CLN8-213ENST00000637156 ZNF713Q8N859 430 aaPredicted RBP24.21■■□□□ 1.47
CLN8-213ENST00000637156 CCDC12Q8WUD4 166 aaPredicted RBP24.21■■□□□ 1.47
CLN8-213ENST00000637156 CHURC1Q8WUH1 139 aa24.21■■□□□ 1.47
CLN8-213ENST00000637156 FBXO28Q9NVF7 368 aa24.21■■□□□ 1.47
CLN8-213ENST00000637156 ELP1O95163 1332 aa24.2■■□□□ 1.47
CLN8-213ENST00000637156 USP14P54578 494 aa24.2■■□□□ 1.46
CLN8-213ENST00000637156 MAP3K11Q16584 847 aa24.2■■□□□ 1.46
CLN8-213ENST00000637156 CSPP1Q1MSJ5 1256 aa24.2■■□□□ 1.46
CLN8-213ENST00000637156 DAGLBQ8NCG7 672 aa24.2■■□□□ 1.46
CLN8-213ENST00000637156 GPT2Q8TD30 523 aa24.2■■□□□ 1.46
CLN8-213ENST00000637156 NMRK2Q9NPI5 230 aa24.2■■□□□ 1.46
CLN8-213ENST00000637156 POLR3EQ9NVU0 708 aa24.2■■□□□ 1.46
CLN8-213ENST00000637156 FEM1BQ9UK73 627 aa24.2■■□□□ 1.46
CLN8-213ENST00000637156 TRAF5O00463 557 aa24.19■■□□□ 1.46
CLN8-213ENST00000637156 WDR46O15213 610 aaKnown RBP24.19■■□□□ 1.46
CLN8-213ENST00000637156 ANO1Q5XXA6 986 aa24.19■■□□□ 1.46
CLN8-213ENST00000637156 LINC00301Q8NCQ3 95 aa24.19■■□□□ 1.46
CLN8-213ENST00000637156 RASGRP4Q8TDF6 673 aa24.19■■□□□ 1.46
CLN8-213ENST00000637156 CNKSR2Q8WXI2 1034 aa24.19■■□□□ 1.46
CLN8-213ENST00000637156 KIFC2Q96AC6 838 aa24.19■■□□□ 1.46
CLN8-213ENST00000637156 C6orf50Q9HD87 102 aa24.19■■□□□ 1.46
CLN8-213ENST00000637156 ZBTB4Q9P1Z0 1013 aaPredicted RBP24.19■■□□□ 1.46
CLN8-213ENST00000637156 PCDHA6Q9UN73 950 aa24.19■■□□□ 1.46
CLN8-213ENST00000637156 PCDHA8Q9Y5H6 950 aa24.19■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms