RNA–Protein interactions for RNA: ENST00000636652.1

CHRNA4-216, Transcript of cholinergic receptor nicotinic alpha 4 subunit, humanhuman

TSL 5

Gene CHRNA4, Length 195 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4-216ENST00000636652 RBM27Q9P2N5 1060 aaKnown RBP15.52■□□□□ 0.08
CHRNA4-216ENST00000636652 SLC45A1Q9Y2W3 748 aa15.52■□□□□ 0.08
CHRNA4-216ENST00000636652 MYPNQ86TC9 1320 aa15.51■□□□□ 0.07
CHRNA4-216ENST00000636652 STK36Q9NRP7 1315 aa15.51■□□□□ 0.07
CHRNA4-216ENST00000636652 PTPDC1A2A3K4 754 aa15.51■□□□□ 0.07
CHRNA4-216ENST00000636652 CYTH3O43739 400 aa15.51■□□□□ 0.07
CHRNA4-216ENST00000636652 FLOT1O75955 427 aa15.51■□□□□ 0.07
CHRNA4-216ENST00000636652 HSP90AA1P07900 732 aaKnown RBP15.51■□□□□ 0.07
CHRNA4-216ENST00000636652 SLC16A2P36021 539 aa15.51■□□□□ 0.07
CHRNA4-216ENST00000636652 HMGN5P82970 282 aaKnown RBP15.51■□□□□ 0.07
CHRNA4-216ENST00000636652 SLC35G1Q2M3R5 365 aa15.51■□□□□ 0.07
CHRNA4-216ENST00000636652 GPAT2Q6NUI2 795 aa15.51■□□□□ 0.07
CHRNA4-216ENST00000636652 PAXIP1Q6ZW49 1069 aaPredicted RBP15.51■□□□□ 0.07
CHRNA4-216ENST00000636652 ANKRD23Q86SG2 305 aa15.51■□□□□ 0.07
CHRNA4-216ENST00000636652 NBPF11Q86T75 865 aa15.51■□□□□ 0.07
CHRNA4-216ENST00000636652 TRIM22Q8IYM9 498 aa15.51■□□□□ 0.07
CHRNA4-216ENST00000636652 CMTR1Q8N1G2 835 aaKnown RBP15.51■□□□□ 0.07
CHRNA4-216ENST00000636652 SMARCC2Q8TAQ2 1214 aa15.51■□□□□ 0.07
CHRNA4-216ENST00000636652 SLF1Q9BQI6 1058 aa15.51■□□□□ 0.07
CHRNA4-216ENST00000636652 RNF26Q9BY78 433 aaPredicted RBP15.51■□□□□ 0.07
CHRNA4-216ENST00000636652 PPP1R9AQ9ULJ8 1098 aa15.51■□□□□ 0.07
CHRNA4-216ENST00000636652 FMNL1O95466 1100 aaPredicted RBP15.5■□□□□ 0.07
CHRNA4-216ENST00000636652 INHBEP58166 350 aa15.5■□□□□ 0.07
CHRNA4-216ENST00000636652 SSRP1Q08945 709 aaKnown RBP15.5■□□□□ 0.07
CHRNA4-216ENST00000636652 SREBF2Q12772 1141 aa15.5■□□□□ 0.07
CHRNA4-216ENST00000636652 NOGQ13253 232 aa15.5■□□□□ 0.07
CHRNA4-216ENST00000636652 CYP4F22Q6NT55 531 aa15.5■□□□□ 0.07
CHRNA4-216ENST00000636652 PRPF38AQ8NAV1 312 aaKnown RBP15.5■□□□□ 0.07
CHRNA4-216ENST00000636652 MTMR8Q96EF0 704 aa15.5■□□□□ 0.07
CHRNA4-216ENST00000636652 CAPNS2Q96L46 248 aa15.5■□□□□ 0.07
CHRNA4-216ENST00000636652 SLC26A6Q9BXS9 759 aa15.5■□□□□ 0.07
CHRNA4-216ENST00000636652 CPVLQ9H3G5 476 aa15.5■□□□□ 0.07
CHRNA4-216ENST00000636652 JMJD4Q9H9V9 463 aa15.5■□□□□ 0.07
CHRNA4-216ENST00000636652 ZCCHC17Q9NP64 241 aaKnown RBP15.5■□□□□ 0.07
CHRNA4-216ENST00000636652 FBXO28Q9NVF7 368 aa15.5■□□□□ 0.07
CHRNA4-216ENST00000636652 PRR12Q9ULL5 1215 aa15.5■□□□□ 0.07
CHRNA4-216ENST00000636652 PTPRFP10586 1907 aa15.49■□□□□ 0.07
CHRNA4-216ENST00000636652 BTBD19C9JJ37 291 aa15.49■□□□□ 0.07
CHRNA4-216ENST00000636652 PRPF3O43395 683 aaKnown RBP15.49■□□□□ 0.07
CHRNA4-216ENST00000636652 JAK2O60674 1132 aa15.49■□□□□ 0.07
CHRNA4-216ENST00000636652 FDX1P10109 184 aa15.49■□□□□ 0.07
CHRNA4-216ENST00000636652 OSBPP22059 807 aa15.49■□□□□ 0.07
CHRNA4-216ENST00000636652 IRX3P78415 501 aaPredicted RBP15.49■□□□□ 0.07
CHRNA4-216ENST00000636652 AKAP17AQ02040 695 aaKnown RBP15.49■□□□□ 0.07
CHRNA4-216ENST00000636652 COG2Q14746 738 aa15.49■□□□□ 0.07
CHRNA4-216ENST00000636652 ADGRF4Q8IZF3 695 aa15.49■□□□□ 0.07
CHRNA4-216ENST00000636652 CCDC82Q8N4S0 544 aa15.49■□□□□ 0.07
CHRNA4-216ENST00000636652 PHKBQ93100 1093 aa15.49■□□□□ 0.07
CHRNA4-216ENST00000636652 KIFC2Q96AC6 838 aa15.49■□□□□ 0.07
CHRNA4-216ENST00000636652 RRP36Q96EU6 259 aaKnown RBP15.49■□□□□ 0.07
CHRNA4-216ENST00000636652 DAXXQ9UER7 740 aaPredicted RBP15.49■□□□□ 0.07
CHRNA4-216ENST00000636652 PNMA3Q9UL41 463 aa15.49■□□□□ 0.07
CHRNA4-216ENST00000636652 SMC3Q9UQE7 1217 aa15.49■□□□□ 0.07
CHRNA4-216ENST00000636652 DEXIO95424 95 aa15.48■□□□□ 0.07
CHRNA4-216ENST00000636652 DSG3P32926 999 aa15.48■□□□□ 0.07
CHRNA4-216ENST00000636652 C1QTNF8P60827 252 aa15.48■□□□□ 0.07
CHRNA4-216ENST00000636652 REM2Q8IYK8 340 aaPredicted RBP15.48■□□□□ 0.07
CHRNA4-216ENST00000636652 ASCC2Q9H1I8 757 aaPredicted RBP15.48■□□□□ 0.07
CHRNA4-216ENST00000636652 RANBP17Q9H2T7 1088 aaKnown RBP15.48■□□□□ 0.07
CHRNA4-216ENST00000636652 VAT1LQ9HCJ6 419 aa15.48■□□□□ 0.07
CHRNA4-216ENST00000636652 HOXC10Q9NYD6 342 aa15.48■□□□□ 0.07
CHRNA4-216ENST00000636652 ORC3Q9UBD5 711 aaPredicted RBP15.48■□□□□ 0.07
CHRNA4-216ENST00000636652 SEC63Q9UGP8 760 aaKnown RBP15.48■□□□□ 0.07
CHRNA4-216ENST00000636652 ADAMTS5Q9UNA0 930 aa15.48■□□□□ 0.07
CHRNA4-216ENST00000636652 KIF3AQ9Y496 699 aa15.48■□□□□ 0.07
CHRNA4-216ENST00000636652 V9GY48 417 aaPredicted RBP15.48■□□□□ 0.07
CHRNA4-216ENST00000636652 SPDYE16A6NNV3 312 aaPredicted RBP15.47■□□□□ 0.07
CHRNA4-216ENST00000636652 PDHXO00330 501 aa15.47■□□□□ 0.07
CHRNA4-216ENST00000636652 ZBTB5O15062 677 aa15.47■□□□□ 0.07
CHRNA4-216ENST00000636652 HSPA6P17066 643 aa15.47■□□□□ 0.07
CHRNA4-216ENST00000636652 CDC37Q16543 378 aaPredicted RBP15.47■□□□□ 0.07
CHRNA4-216ENST00000636652 LBX2Q6XYB7 198 aa15.47■□□□□ 0.07
CHRNA4-216ENST00000636652 HOMER1Q86YM7 354 aa15.47■□□□□ 0.07
CHRNA4-216ENST00000636652 FAM43AQ8N2R8 423 aa15.47■□□□□ 0.07
CHRNA4-216ENST00000636652 GTF3C2Q8WUA4 911 aaPredicted RBP15.47■□□□□ 0.07
CHRNA4-216ENST00000636652 WASF1Q92558 559 aa15.47■□□□□ 0.07
CHRNA4-216ENST00000636652 ATG4CQ96DT6 458 aa15.47■□□□□ 0.07
CHRNA4-216ENST00000636652 DDX11Q96FC9 970 aa15.47■□□□□ 0.07
CHRNA4-216ENST00000636652 IPO9Q96P70 1041 aaKnown RBP15.47■□□□□ 0.07
CHRNA4-216ENST00000636652 PIGSQ96S52 555 aa15.47■□□□□ 0.07
CHRNA4-216ENST00000636652 PARK7Q99497 189 aaKnown RBP15.47■□□□□ 0.07
CHRNA4-216ENST00000636652 PTPN18Q99952 460 aa15.47■□□□□ 0.07
CHRNA4-216ENST00000636652 SLC38A10Q9HBR0 1119 aa15.47■□□□□ 0.07
CHRNA4-216ENST00000636652 PNMA2Q9UL42 364 aa15.47■□□□□ 0.07
CHRNA4-216ENST00000636652 PNMA6FA0A0J9YX94 578 aa15.46■□□□□ 0.07
CHRNA4-216ENST00000636652 VWA5AO00534 786 aa15.46■□□□□ 0.07
CHRNA4-216ENST00000636652 ZBED4O75132 1171 aa15.46■□□□□ 0.07
CHRNA4-216ENST00000636652 PPFIA3O75145 1194 aa15.46■□□□□ 0.07
CHRNA4-216ENST00000636652 FDPSP14324 419 aaKnown RBP15.46■□□□□ 0.07
CHRNA4-216ENST00000636652 GJB2P29033 226 aa15.46■□□□□ 0.07
CHRNA4-216ENST00000636652 TM4SF4P48230 202 aa15.46■□□□□ 0.07
CHRNA4-216ENST00000636652 HERVK_113P62684 666 aa15.46■□□□□ 0.07
CHRNA4-216ENST00000636652 KIF23Q02241 960 aaPredicted RBP15.46■□□□□ 0.07
CHRNA4-216ENST00000636652 GRM1Q13255 1194 aa15.46■□□□□ 0.07
CHRNA4-216ENST00000636652 PFKFB3Q16875 520 aaPredicted RBP15.46■□□□□ 0.07
CHRNA4-216ENST00000636652 QRICH1Q2TAL8 776 aa15.46■□□□□ 0.07
CHRNA4-216ENST00000636652 OTUD7BQ6GQQ9 843 aa15.46■□□□□ 0.07
CHRNA4-216ENST00000636652 SAMD1Q6SPF0 538 aaPredicted RBP15.46■□□□□ 0.07
CHRNA4-216ENST00000636652 IFNL1Q8IU54 200 aa15.46■□□□□ 0.07
CHRNA4-216ENST00000636652 MB21D1Q8N884 522 aa15.46■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms