RNA–Protein interactions for RNA: ENST00000635750.1

SCN1A-209, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SCN1A, Length 8,299 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-209ENST00000635750 PDE8AO60658 829 aa6.08□□□□□ -1.44
SCN1A-209ENST00000635750 MYL5Q02045 173 aa6.08□□□□□ -1.44
SCN1A-209ENST00000635750 KLHL30Q0D2K2 578 aa6.08□□□□□ -1.44
SCN1A-209ENST00000635750 MUM1Q2TAK8 710 aa6.08□□□□□ -1.44
SCN1A-209ENST00000635750 MAP7D3Q8IWC1 876 aa6.08□□□□□ -1.44
SCN1A-209ENST00000635750 NR1H4Q96RI1 486 aaPredicted RBP6.08□□□□□ -1.44
SCN1A-209ENST00000635750 NCOA1Q15788 1441 aa6.08□□□□□ -1.44
SCN1A-209ENST00000635750 CEP104O60308 925 aa6.08□□□□□ -1.44
SCN1A-209ENST00000635750 F13A1P00488 732 aa6.08□□□□□ -1.44
SCN1A-209ENST00000635750 CEBPAP49715 358 aaPredicted RBP6.08□□□□□ -1.44
SCN1A-209ENST00000635750 PAK2Q13177 524 aa6.08□□□□□ -1.44
SCN1A-209ENST00000635750 ANKRD20A4Q4UJ75 823 aa6.08□□□□□ -1.44
SCN1A-209ENST00000635750 ANKRD20A8PQ5CZ79 823 aa6.08□□□□□ -1.44
SCN1A-209ENST00000635750 ANKRD20A2Q5SQ80 823 aa6.08□□□□□ -1.44
SCN1A-209ENST00000635750 ANKRD20A1Q5TYW2 823 aa6.08□□□□□ -1.44
SCN1A-209ENST00000635750 ADALQ6DHV7 355 aa6.08□□□□□ -1.44
SCN1A-209ENST00000635750 NUDT18Q6ZVK8 323 aa6.08□□□□□ -1.44
SCN1A-209ENST00000635750 BTG4Q9NY30 223 aa6.08□□□□□ -1.44
SCN1A-209ENST00000635750 DONSONQ9NYP3 566 aa6.08□□□□□ -1.44
SCN1A-209ENST00000635750 STAT1P42224 750 aa6.08□□□□□ -1.44
SCN1A-209ENST00000635750 RAD51AP2Q09MP3 1159 aa6.08□□□□□ -1.44
SCN1A-209ENST00000635750 WASHC5Q12768 1159 aa6.08□□□□□ -1.44
SCN1A-209ENST00000635750 ARHGAP44Q17R89 818 aa6.08□□□□□ -1.44
SCN1A-209ENST00000635750 BEND3Q5T5X7 828 aa6.08□□□□□ -1.44
SCN1A-209ENST00000635750 CCDC84Q86UT8 332 aaPredicted RBP6.08□□□□□ -1.44
SCN1A-209ENST00000635750 ESYT1Q9BSJ8 1104 aa6.08□□□□□ -1.44
SCN1A-209ENST00000635750 SLITRK6Q9H5Y7 841 aa6.08□□□□□ -1.44
SCN1A-209ENST00000635750 NDUFAB1O14561 156 aa6.08□□□□□ -1.44
SCN1A-209ENST00000635750 POLR2DO15514 142 aaKnown RBP6.08□□□□□ -1.44
SCN1A-209ENST00000635750 GPC4O75487 556 aa6.08□□□□□ -1.44
SCN1A-209ENST00000635750 XRCC5P13010 732 aaKnown RBP6.08□□□□□ -1.44
SCN1A-209ENST00000635750 RXRAP19793 462 aa6.08□□□□□ -1.44
SCN1A-209ENST00000635750 STX2P32856 288 aa6.08□□□□□ -1.44
SCN1A-209ENST00000635750 CCDC186Q7Z3E2 898 aa6.08□□□□□ -1.44
SCN1A-209ENST00000635750 GDAP1Q8TB36 358 aa6.08□□□□□ -1.44
SCN1A-209ENST00000635750 MOSPD1Q9UJG1 213 aa6.08□□□□□ -1.44
SCN1A-209ENST00000635750 POLR2MP0CAP2 368 aa6.08□□□□□ -1.44
SCN1A-209ENST00000635750 SDSP20132 328 aa6.08□□□□□ -1.44
SCN1A-209ENST00000635750 ARHGAP25P42331 645 aa6.08□□□□□ -1.44
SCN1A-209ENST00000635750 EPHB1P54762 984 aa6.08□□□□□ -1.44
SCN1A-209ENST00000635750 IGBP1P78318 339 aa6.08□□□□□ -1.44
SCN1A-209ENST00000635750 DNM1Q05193 864 aaKnown RBP6.08□□□□□ -1.44
SCN1A-209ENST00000635750 SLC12A1Q13621 1099 aa6.08□□□□□ -1.44
SCN1A-209ENST00000635750 C16orf72Q14CZ0 275 aa6.08□□□□□ -1.44
SCN1A-209ENST00000635750 SRRM1Q8IYB3 904 aaKnown RBP6.08□□□□□ -1.44
SCN1A-209ENST00000635750 SUGCTQ9HAC7 445 aa6.08□□□□□ -1.44
SCN1A-209ENST00000635750 SMYD2Q9NRG4 433 aa6.08□□□□□ -1.44
SCN1A-209ENST00000635750 ITSN2Q9NZM3 1697 aa6.08□□□□□ -1.44
SCN1A-209ENST00000635750 SYNJ2BP-COX16A0A087WUM0 186 aa6.07□□□□□ -1.44
SCN1A-209ENST00000635750 TMCC1O94876 653 aa6.07□□□□□ -1.44
SCN1A-209ENST00000635750 IFNB1P01574 187 aa6.07□□□□□ -1.44
SCN1A-209ENST00000635750 ANXA1P04083 346 aa6.07□□□□□ -1.44
SCN1A-209ENST00000635750 TFCP2Q12800 502 aa6.07□□□□□ -1.44
SCN1A-209ENST00000635750 RNF139Q8WU17 664 aa6.07□□□□□ -1.44
SCN1A-209ENST00000635750 ZSCAN32Q9NX65 697 aa6.07□□□□□ -1.44
SCN1A-209ENST00000635750 COX16Q9P0S2 106 aa6.07□□□□□ -1.44
SCN1A-209ENST00000635750 LRWD1Q9UFC0 647 aa6.07□□□□□ -1.44
SCN1A-209ENST00000635750 ZNF215Q9UL58 517 aaPredicted RBP6.07□□□□□ -1.44
SCN1A-209ENST00000635750 IGF1RP08069 1367 aa6.07□□□□□ -1.44
SCN1A-209ENST00000635750 PTPN23Q9H3S7 1636 aa6.07□□□□□ -1.44
SCN1A-209ENST00000635750 RECQLP46063 649 aaPredicted RBP6.07□□□□□ -1.44
SCN1A-209ENST00000635750 NOLC1Q14978 699 aaKnown RBP eCLIP6.07□□□□□ -1.44
SCN1A-209ENST00000635750 LONRF2Q1L5Z9 754 aa6.07□□□□□ -1.44
SCN1A-209ENST00000635750 KLHL40Q2TBA0 621 aa6.07□□□□□ -1.44
SCN1A-209ENST00000635750 CREB3L3Q68CJ9 461 aa6.07□□□□□ -1.44
SCN1A-209ENST00000635750 GADD45GIP1Q8TAE8 222 aaPredicted RBP6.07□□□□□ -1.44
SCN1A-209ENST00000635750 APOL6Q9BWW8 343 aa6.07□□□□□ -1.44
SCN1A-209ENST00000635750 TTI1O43156 1089 aa6.07□□□□□ -1.44
SCN1A-209ENST00000635750 ITGA6P23229 1130 aa6.07□□□□□ -1.44
SCN1A-209ENST00000635750 SERPINB6P35237 376 aa6.07□□□□□ -1.44
SCN1A-209ENST00000635750 KCTD2Q14681 263 aa6.07□□□□□ -1.44
SCN1A-209ENST00000635750 XKR9Q5GH70 373 aa6.07□□□□□ -1.44
SCN1A-209ENST00000635750 TTC38Q5R3I4 469 aa6.07□□□□□ -1.44
SCN1A-209ENST00000635750 FAM186BQ8IYM0 893 aa6.07□□□□□ -1.44
SCN1A-209ENST00000635750 REXO1Q8N1G1 1221 aaKnown RBP6.07□□□□□ -1.44
SCN1A-209ENST00000635750 NRBF2Q96F24 287 aa6.07□□□□□ -1.44
SCN1A-209ENST00000635750 SRPK1Q96SB4 655 aaKnown RBP6.07□□□□□ -1.44
SCN1A-209ENST00000635750 ADD3Q9UEY8 706 aaKnown RBP6.07□□□□□ -1.44
SCN1A-209ENST00000635750 ANKRD36BQ8N2N9 1353 aa6.07□□□□□ -1.44
SCN1A-209ENST00000635750 DENND4BO75064 1496 aaPredicted RBP6.07□□□□□ -1.44
SCN1A-209ENST00000635750 RGS16O15492 202 aaPredicted RBP6.07□□□□□ -1.44
SCN1A-209ENST00000635750 PMLP29590 882 aa6.07□□□□□ -1.44
SCN1A-209ENST00000635750 ADCY8P40145 1251 aa6.07□□□□□ -1.44
SCN1A-209ENST00000635750 PRKCQQ04759 706 aa6.07□□□□□ -1.44
SCN1A-209ENST00000635750 SUPT20HL1Q3ZLR7 823 aa6.07□□□□□ -1.44
SCN1A-209ENST00000635750 FBXL13Q8NEE6 735 aa6.07□□□□□ -1.44
SCN1A-209ENST00000635750 RUNDC3BQ96NL0 473 aa6.07□□□□□ -1.44
SCN1A-209ENST00000635750 SLC38A10Q9HBR0 1119 aa6.07□□□□□ -1.44
SCN1A-209ENST00000635750 LRRIQ4A6NIV6 560 aa6.07□□□□□ -1.44
SCN1A-209ENST00000635750 HGSO14964 777 aaPredicted RBP6.07□□□□□ -1.44
SCN1A-209ENST00000635750 SOX5P35711 763 aa6.07□□□□□ -1.44
SCN1A-209ENST00000635750 LMNB2Q03252 620 aa6.07□□□□□ -1.44
SCN1A-209ENST00000635750 THOC5Q13769 683 aaKnown RBP6.07□□□□□ -1.44
SCN1A-209ENST00000635750 MYSM1Q5VVJ2 828 aa6.07□□□□□ -1.44
SCN1A-209ENST00000635750 BBOF1Q8ND07 529 aa6.07□□□□□ -1.44
SCN1A-209ENST00000635750 NCAPD3P42695 1498 aa6.07□□□□□ -1.44
SCN1A-209ENST00000635750 DPYSL4O14531 572 aa6.07□□□□□ -1.44
SCN1A-209ENST00000635750 ALAS1P13196 640 aa6.07□□□□□ -1.44
SCN1A-209ENST00000635750 EVCP57679 992 aa6.07□□□□□ -1.44
SCN1A-209ENST00000635750 TTBK2Q6IQ55 1244 aa6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms