RNA–Protein interactions for RNA: ENST00000635747.1

CLN6-210, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 1,181 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-210ENST00000635747 IL17RBQ9NRM6 502 aa21.6■■□□□ 1.05
CLN6-210ENST00000635747 DIS3Q9Y2L1 958 aaKnown RBP21.6■■□□□ 1.05
CLN6-210ENST00000635747 PLA2G6O60733 806 aa21.59■■□□□ 1.05
CLN6-210ENST00000635747 IGHA2P01877 340 aa21.59■■□□□ 1.05
CLN6-210ENST00000635747 SLC1A4P43007 532 aa21.59■■□□□ 1.05
CLN6-210ENST00000635747 NOVP48745 357 aa21.59■■□□□ 1.05
CLN6-210ENST00000635747 STAT2P52630 851 aa21.59■■□□□ 1.05
CLN6-210ENST00000635747 OAZ1P54368 228 aa21.59■■□□□ 1.05
CLN6-210ENST00000635747 RRP12Q5JTH9 1297 aaKnown RBP21.59■■□□□ 1.05
CLN6-210ENST00000635747 AKNAD1Q5T1N1 836 aa21.59■■□□□ 1.05
CLN6-210ENST00000635747 SLC38A10Q9HBR0 1119 aa21.59■■□□□ 1.05
CLN6-210ENST00000635747 TCP11L1Q9NUJ3 509 aa21.59■■□□□ 1.05
CLN6-210ENST00000635747 ZNF236Q9UL36 1845 aa21.59■■□□□ 1.05
CLN6-210ENST00000635747 ZNF213O14771 459 aa21.58■■□□□ 1.05
CLN6-210ENST00000635747 CNGA1P29973 690 aa21.58■■□□□ 1.05
CLN6-210ENST00000635747 CYP2C19P33261 490 aa21.58■■□□□ 1.05
CLN6-210ENST00000635747 LHX8Q68G74 356 aa21.58■■□□□ 1.05
CLN6-210ENST00000635747 SNRNP48Q6IEG0 339 aaKnown RBP21.58■■□□□ 1.05
CLN6-210ENST00000635747 STAG1Q8WVM7 1258 aa21.58■■□□□ 1.05
CLN6-210ENST00000635747 ISY1Q9ULR0 285 aaKnown RBP21.58■■□□□ 1.05
CLN6-210ENST00000635747 PARP14Q460N5 1801 aa21.57■■□□□ 1.04
CLN6-210ENST00000635747 MYH4Q9Y623 1939 aa21.57■■□□□ 1.04
CLN6-210ENST00000635747 TMEM232C9JQI7 657 aa21.57■■□□□ 1.04
CLN6-210ENST00000635747 MCCP23508 829 aa21.57■■□□□ 1.04
CLN6-210ENST00000635747 PDE4AP27815 886 aa21.57■■□□□ 1.04
CLN6-210ENST00000635747 HAND2P61296 217 aa21.57■■□□□ 1.04
CLN6-210ENST00000635747 IKQ13123 557 aaPredicted RBP21.57■■□□□ 1.04
CLN6-210ENST00000635747 TTC22Q5TAA0 569 aa21.57■■□□□ 1.04
CLN6-210ENST00000635747 RCSD1Q6JBY9 416 aa21.57■■□□□ 1.04
CLN6-210ENST00000635747 MAML3Q96JK9 1138 aa21.57■■□□□ 1.04
CLN6-210ENST00000635747 DSCC1Q9BVC3 393 aa21.57■■□□□ 1.04
CLN6-210ENST00000635747 FBXO40Q9UH90 709 aa21.57■■□□□ 1.04
CLN6-210ENST00000635747 DDX20Q9UHI6 824 aaKnown RBP21.57■■□□□ 1.04
CLN6-210ENST00000635747 NRBP1Q9UHY1 535 aa21.57■■□□□ 1.04
CLN6-210ENST00000635747 CTNNA3Q9UI47 895 aa21.57■■□□□ 1.04
CLN6-210ENST00000635747 TACC3Q9Y6A5 838 aa21.57■■□□□ 1.04
CLN6-210ENST00000635747 H0YGN5 161 aa21.56■■□□□ 1.04
CLN6-210ENST00000635747 EVI5O60447 810 aa21.56■■□□□ 1.04
CLN6-210ENST00000635747 NMT2O60551 498 aa21.56■■□□□ 1.04
CLN6-210ENST00000635747 CYBAP13498 195 aa21.56■■□□□ 1.04
CLN6-210ENST00000635747 CPXCR1Q8N123 301 aa21.56■■□□□ 1.04
CLN6-210ENST00000635747 TTC14Q96N46 770 aa21.56■■□□□ 1.04
CLN6-210ENST00000635747 C11orf49Q9H6J7 331 aa21.56■■□□□ 1.04
CLN6-210ENST00000635747 TOP1P11387 765 aaKnown RBP21.55■■□□□ 1.04
CLN6-210ENST00000635747 DHX30Q7L2E3 1194 aaKnown RBP eCLIP21.55■■□□□ 1.04
CLN6-210ENST00000635747 CHST13Q8NET6 341 aa21.55■■□□□ 1.04
CLN6-210ENST00000635747 DIS3LQ8TF46 1054 aaKnown RBP21.55■■□□□ 1.04
CLN6-210ENST00000635747 DCAF4Q8WV16 495 aa21.55■■□□□ 1.04
CLN6-210ENST00000635747 ESR2Q92731 530 aa21.55■■□□□ 1.04
CLN6-210ENST00000635747 MNX1P50219 401 aaPredicted RBP21.54■■□□□ 1.04
CLN6-210ENST00000635747 IMMTQ16891 758 aaKnown RBP21.54■■□□□ 1.04
CLN6-210ENST00000635747 ZNF792Q3KQV3 632 aa21.54■■□□□ 1.04
CLN6-210ENST00000635747 CCDC178Q5BJE1 867 aa21.54■■□□□ 1.04
CLN6-210ENST00000635747 MSL3Q8N5Y2 521 aaKnown RBP21.54■■□□□ 1.04
CLN6-210ENST00000635747 RUFY2Q8WXA3 655 aa21.54■■□□□ 1.04
CLN6-210ENST00000635747 DDX11Q96FC9 970 aa21.54■■□□□ 1.04
CLN6-210ENST00000635747 RAVER2Q9HCJ3 691 aaKnown RBP21.54■■□□□ 1.04
CLN6-210ENST00000635747 RIPK3Q9Y572 518 aa21.54■■□□□ 1.04
CLN6-210ENST00000635747 SEPT4O43236 478 aa21.53■■□□□ 1.04
CLN6-210ENST00000635747 PGK2P07205 417 aa21.53■■□□□ 1.04
CLN6-210ENST00000635747 SLC4A3P48751 1232 aa21.53■■□□□ 1.04
CLN6-210ENST00000635747 TRPV1Q8NER1 839 aa21.53■■□□□ 1.04
CLN6-210ENST00000635747 TINF2Q9BSI4 451 aa21.53■■□□□ 1.04
CLN6-210ENST00000635747 COL11A1P12107 1806 aaPredicted RBP21.52■■□□□ 1.04
CLN6-210ENST00000635747 GSPT1P15170 499 aaKnown RBP21.52■■□□□ 1.04
CLN6-210ENST00000635747 TKFCQ3LXA3 575 aa21.52■■□□□ 1.04
CLN6-210ENST00000635747 KCTD1Q719H9 257 aa21.52■■□□□ 1.04
CLN6-210ENST00000635747 TBC1D10CQ8IV04 446 aa21.52■■□□□ 1.04
CLN6-210ENST00000635747 ARRDC4Q8NCT1 418 aa21.52■■□□□ 1.04
CLN6-210ENST00000635747 TMEM47Q9BQJ4 181 aa21.52■■□□□ 1.04
CLN6-210ENST00000635747 RAD50Q92878 1312 aa21.52■■□□□ 1.03
CLN6-210ENST00000635747 CCDC96Q2M329 555 aa21.51■■□□□ 1.03
CLN6-210ENST00000635747 IQCA1Q86XH1 822 aa21.51■■□□□ 1.03
CLN6-210ENST00000635747 ANKRD35Q8N283 1001 aa21.51■■□□□ 1.03
CLN6-210ENST00000635747 DNAH12Q6ZR08 3092 aa21.5■■□□□ 1.03
CLN6-210ENST00000635747 DNAJC25-GNG10A0A024R161 153 aa21.5■■□□□ 1.03
CLN6-210ENST00000635747 COL6A1P12109 1028 aa21.5■■□□□ 1.03
CLN6-210ENST00000635747 ZNF467Q7Z7K2 595 aaPredicted RBP21.5■■□□□ 1.03
CLN6-210ENST00000635747 DGKHQ86XP1 1220 aa21.5■■□□□ 1.03
CLN6-210ENST00000635747 ACAD9Q9H845 621 aa21.5■■□□□ 1.03
CLN6-210ENST00000635747 CNNM2Q9H8M5 875 aa21.5■■□□□ 1.03
CLN6-210ENST00000635747 MTMR7Q9Y216 660 aa21.5■■□□□ 1.03
CLN6-210ENST00000635747 DNM1LO00429 736 aa21.49■■□□□ 1.03
CLN6-210ENST00000635747 HABP4Q5JVS0 413 aaKnown RBP21.49■■□□□ 1.03
CLN6-210ENST00000635747 PRAMEF19Q5SWL8 479 aa21.49■■□□□ 1.03
CLN6-210ENST00000635747 BTNL9Q6UXG8 535 aa21.49■■□□□ 1.03
CLN6-210ENST00000635747 CHMP4CQ96CF2 233 aa21.49■■□□□ 1.03
CLN6-210ENST00000635747 KRT23Q9C075 422 aa21.49■■□□□ 1.03
CLN6-210ENST00000635747 PNMA2Q9UL42 364 aa21.49■■□□□ 1.03
CLN6-210ENST00000635747 PRR12Q9ULL5 1215 aa21.49■■□□□ 1.03
CLN6-210ENST00000635747 CNPY2Q9Y2B0 182 aa21.49■■□□□ 1.03
CLN6-210ENST00000635747 SYNGAP1Q96PV0 1343 aa21.49■■□□□ 1.03
CLN6-210ENST00000635747 CEP290O15078 2479 aa21.49■■□□□ 1.03
CLN6-210ENST00000635747 MAMDC4Q6UXC1 1216 aa21.48■■□□□ 1.03
CLN6-210ENST00000635747 PFASO15067 1338 aa21.48■■□□□ 1.03
CLN6-210ENST00000635747 NEDD4P46934 1319 aa21.48■■□□□ 1.03
CLN6-210ENST00000635747 ZNFX1Q9P2E3 1918 aaKnown RBP21.47■■□□□ 1.03
CLN6-210ENST00000635747 CHMLP26374 656 aa21.47■■□□□ 1.03
CLN6-210ENST00000635747 AGBL1Q96MI9 1066 aa21.47■■□□□ 1.03
CLN6-210ENST00000635747 HOMER2Q9NSB8 354 aa21.47■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms