RNA–Protein interactions for RNA: ENST00000635578.1

SMARCB1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 242 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-209ENST00000635578 C8orf49Q96NF6 230 aa2.18□□□□□ -2.06
SMARCB1-209ENST00000635578 KIF2CQ99661 725 aa2.18□□□□□ -2.06
SMARCB1-209ENST00000635578 MENTQ9BUN1 341 aa2.18□□□□□ -2.06
SMARCB1-209ENST00000635578 MRIQ9BWK5 157 aa2.18□□□□□ -2.06
SMARCB1-209ENST00000635578 HDAC8Q9BY41 377 aa2.18□□□□□ -2.06
SMARCB1-209ENST00000635578 PRDM14Q9GZV8 571 aa2.18□□□□□ -2.06
SMARCB1-209ENST00000635578 USTQ9Y2C2 406 aa2.18□□□□□ -2.06
SMARCB1-209ENST00000635578 DUSP10Q9Y6W6 482 aa2.18□□□□□ -2.06
SMARCB1-209ENST00000635578 WTIPA6NIX2 430 aaPredicted RBP2.17□□□□□ -2.06
SMARCB1-209ENST00000635578 SOWAHDA6NJG2 315 aa2.17□□□□□ -2.06
SMARCB1-209ENST00000635578 CHURC1-FNTBB4DL54 471 aa2.17□□□□□ -2.06
SMARCB1-209ENST00000635578 F6X3S4 739 aa2.17□□□□□ -2.06
SMARCB1-209ENST00000635578 MEIS1O00470 390 aa2.17□□□□□ -2.06
SMARCB1-209ENST00000635578 SLPIP03973 132 aa2.17□□□□□ -2.06
SMARCB1-209ENST00000635578 PLA2G1BP04054 148 aaKnown RBP2.17□□□□□ -2.06
SMARCB1-209ENST00000635578 ITGB3P05106 788 aa2.17□□□□□ -2.06
SMARCB1-209ENST00000635578 MSL3P1P0C860 447 aa2.17□□□□□ -2.06
SMARCB1-209ENST00000635578 ZNF20P17024 532 aa2.17□□□□□ -2.06
SMARCB1-209ENST00000635578 PFKLP17858 780 aa2.17□□□□□ -2.06
SMARCB1-209ENST00000635578 IGFBP6P24592 240 aaPredicted RBP2.17□□□□□ -2.06
SMARCB1-209ENST00000635578 LIG3P49916 1009 aa2.17□□□□□ -2.06
SMARCB1-209ENST00000635578 GJA9P57773 515 aa2.17□□□□□ -2.06
SMARCB1-209ENST00000635578 RPS26P62854 115 aaKnown RBP2.17□□□□□ -2.06
SMARCB1-209ENST00000635578 LAPTM5Q13571 262 aa2.17□□□□□ -2.06
SMARCB1-209ENST00000635578 VWA3BQ502W6 1294 aa2.17□□□□□ -2.06
SMARCB1-209ENST00000635578 ALG1LQ6GMV1 187 aa2.17□□□□□ -2.06
SMARCB1-209ENST00000635578 AGMOQ6ZNB7 445 aa2.17□□□□□ -2.06
SMARCB1-209ENST00000635578 NLGN1Q8N2Q7 840 aa2.17□□□□□ -2.06
SMARCB1-209ENST00000635578 SYTL5Q8TDW5 730 aaPredicted RBP2.17□□□□□ -2.06
SMARCB1-209ENST00000635578 FNIP1Q8TF40 1166 aa2.17□□□□□ -2.06
SMARCB1-209ENST00000635578 ZNF526Q8TF50 670 aaPredicted RBP2.17□□□□□ -2.06
SMARCB1-209ENST00000635578 CDADC1Q9BWV3 514 aa2.17□□□□□ -2.06
SMARCB1-209ENST00000635578 IMPACTQ9P2X3 320 aa2.17□□□□□ -2.06
SMARCB1-209ENST00000635578 CNOT11Q9UKZ1 510 aaKnown RBP2.17□□□□□ -2.06
SMARCB1-209ENST00000635578 PLA2G2DQ9UNK4 145 aa2.17□□□□□ -2.06
SMARCB1-209ENST00000635578 MINPP1Q9UNW1 487 aa2.17□□□□□ -2.06
SMARCB1-209ENST00000635578 TLR6Q9Y2C9 796 aa2.17□□□□□ -2.06
SMARCB1-209ENST00000635578 FAN1Q9Y2M0 1017 aa2.17□□□□□ -2.06
SMARCB1-209ENST00000635578 PMF1-BGLAPU3KQ54 211 aa2.17□□□□□ -2.06
SMARCB1-209ENST00000635578 FADS2P1A8MWK0 482 aa2.16□□□□□ -2.06
SMARCB1-209ENST00000635578 PRAMEF1O95521 474 aa2.16□□□□□ -2.06
SMARCB1-209ENST00000635578 BPNT1O95861 308 aa2.16□□□□□ -2.06
SMARCB1-209ENST00000635578 TACR2P21452 398 aa2.16□□□□□ -2.06
SMARCB1-209ENST00000635578 GBP1P32455 592 aa2.16□□□□□ -2.06
SMARCB1-209ENST00000635578 GDF5P43026 501 aa2.16□□□□□ -2.06
SMARCB1-209ENST00000635578 SNW1Q13573 536 aaKnown RBP2.16□□□□□ -2.06
SMARCB1-209ENST00000635578 TARBP2Q15633 366 aaKnown RBP2.16□□□□□ -2.06
SMARCB1-209ENST00000635578 CRB2Q5IJ48 1285 aa2.16□□□□□ -2.06
SMARCB1-209ENST00000635578 CPZQ66K79 652 aa2.16□□□□□ -2.06
SMARCB1-209ENST00000635578 ZC3H14Q6PJT7 736 aaKnown RBP2.16□□□□□ -2.06
SMARCB1-209ENST00000635578 SPRED1Q7Z699 444 aa2.16□□□□□ -2.06
SMARCB1-209ENST00000635578 SLFN12Q8IYM2 578 aa2.16□□□□□ -2.06
SMARCB1-209ENST00000635578 ZNF655Q8N720 491 aaPredicted RBP2.16□□□□□ -2.06
SMARCB1-209ENST00000635578 DAGLBQ8NCG7 672 aa2.16□□□□□ -2.06
SMARCB1-209ENST00000635578 LINC00116Q8NCU8 138 aa2.16□□□□□ -2.06
SMARCB1-209ENST00000635578 ENOX1Q8TC92 643 aaKnown RBP2.16□□□□□ -2.06
SMARCB1-209ENST00000635578 FCRL2Q96LA5 508 aaPredicted RBP2.16□□□□□ -2.06
SMARCB1-209ENST00000635578 CCDC74BQ96LY2 380 aa2.16□□□□□ -2.06
SMARCB1-209ENST00000635578 TNFRSF12AQ9NP84 129 aa2.16□□□□□ -2.06
SMARCB1-209ENST00000635578 TNFRSF10DQ9UBN6 386 aa2.16□□□□□ -2.06
SMARCB1-209ENST00000635578 REV1Q9UBZ9 1251 aa2.16□□□□□ -2.06
SMARCB1-209ENST00000635578 HCFC2Q9Y5Z7 792 aa2.16□□□□□ -2.06
SMARCB1-209ENST00000635578 A0A1W2PQ27 194 aa2.15□□□□□ -2.07
SMARCB1-209ENST00000635578 A0A1W2PQ64 194 aa2.15□□□□□ -2.07
SMARCB1-209ENST00000635578 A0A1W2PQC6 194 aa2.15□□□□□ -2.07
SMARCB1-209ENST00000635578 A0A1W2PQD8 194 aa2.15□□□□□ -2.07
SMARCB1-209ENST00000635578 A0A1W2PQJ5 194 aa2.15□□□□□ -2.07
SMARCB1-209ENST00000635578 NOBOXO60393 691 aa2.15□□□□□ -2.07
SMARCB1-209ENST00000635578 DNAJA2O60884 412 aa2.15□□□□□ -2.07
SMARCB1-209ENST00000635578 HTR3BO95264 441 aa2.15□□□□□ -2.07
SMARCB1-209ENST00000635578 ATF2P15336 505 aa2.15□□□□□ -2.07
SMARCB1-209ENST00000635578 EIF4BP23588 611 aaKnown RBP2.15□□□□□ -2.07
SMARCB1-209ENST00000635578 MC3RP41968 323 aa2.15□□□□□ -2.07
SMARCB1-209ENST00000635578 MAPKAPK2P49137 400 aa2.15□□□□□ -2.07
SMARCB1-209ENST00000635578 RNF4P78317 190 aa2.15□□□□□ -2.07
SMARCB1-209ENST00000635578 FOXO4P98177 505 aa2.15□□□□□ -2.07
SMARCB1-209ENST00000635578 FMR1Q06787 632 aaKnown RBP eCLIP2.15□□□□□ -2.07
SMARCB1-209ENST00000635578 CBX2Q14781 532 aaPredicted RBP2.15□□□□□ -2.07
SMARCB1-209ENST00000635578 TMEM201Q5SNT2 666 aa2.15□□□□□ -2.07
SMARCB1-209ENST00000635578 DIEXFQ68CQ4 756 aaKnown RBP2.15□□□□□ -2.07
SMARCB1-209ENST00000635578 BNC2Q6ZN30 1099 aaPredicted RBP2.15□□□□□ -2.07
SMARCB1-209ENST00000635578 SLCO6A1Q86UG4 719 aa2.15□□□□□ -2.07
SMARCB1-209ENST00000635578 CARFQ8N187 725 aa2.15□□□□□ -2.07
SMARCB1-209ENST00000635578 CHST13Q8NET6 341 aa2.15□□□□□ -2.07
SMARCB1-209ENST00000635578 SH3RF3Q8TEJ3 882 aaPredicted RBP2.15□□□□□ -2.07
SMARCB1-209ENST00000635578 ARID3AQ99856 593 aa2.15□□□□□ -2.07
SMARCB1-209ENST00000635578 KRTAP3-1Q9BYR8 98 aa2.15□□□□□ -2.07
SMARCB1-209ENST00000635578 LNPKQ9C0E8 428 aa2.15□□□□□ -2.07
SMARCB1-209ENST00000635578 C1orf115Q9H7X2 142 aa2.15□□□□□ -2.07
SMARCB1-209ENST00000635578 ERVK13-1Q9NX77 482 aa2.15□□□□□ -2.07
SMARCB1-209ENST00000635578 C1QTNF3-AMACRE9PGA6 284 aa2.14□□□□□ -2.07
SMARCB1-209ENST00000635578 SUPT5HO00267 1087 aaKnown RBP2.14□□□□□ -2.07
SMARCB1-209ENST00000635578 LDHBP07195 334 aaKnown RBP2.14□□□□□ -2.07
SMARCB1-209ENST00000635578 P4HBP07237 508 aaKnown RBP2.14□□□□□ -2.07
SMARCB1-209ENST00000635578 FBLN1P23142 703 aa2.14□□□□□ -2.07
SMARCB1-209ENST00000635578 TACR1P25103 407 aa2.14□□□□□ -2.07
SMARCB1-209ENST00000635578 POLR2BP30876 1174 aaKnown RBP2.14□□□□□ -2.07
SMARCB1-209ENST00000635578 NBPF9Q3BBW0 867 aa2.14□□□□□ -2.07
SMARCB1-209ENST00000635578 MEI1Q5TIA1 1274 aa2.14□□□□□ -2.07
SMARCB1-209ENST00000635578 BICRALQ6AI39 1079 aa2.14□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms