RNA–Protein interactions for RNA: ENST00000634926.1

SMARCB1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 269 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-208ENST00000634926 IRS2Q9Y4H2 1338 aa4.23□□□□□ -1.73
SMARCB1-208ENST00000634926 EIF4G3O43432 1585 aaKnown RBP4.23□□□□□ -1.73
SMARCB1-208ENST00000634926 KIR2DL1P43626 348 aaPredicted RBP4.23□□□□□ -1.73
SMARCB1-208ENST00000634926 KIR2DL2P43627 348 aaPredicted RBP4.23□□□□□ -1.73
SMARCB1-208ENST00000634926 BBS9Q3SYG4 887 aa4.23□□□□□ -1.73
SMARCB1-208ENST00000634926 LSRQ86X29 649 aaPredicted RBP4.23□□□□□ -1.73
SMARCB1-208ENST00000634926 SYTL4Q96C24 671 aaPredicted RBP4.23□□□□□ -1.73
SMARCB1-208ENST00000634926 PRDM14Q9GZV8 571 aa4.23□□□□□ -1.73
SMARCB1-208ENST00000634926 RIMBP3CA6NJZ7 1639 aa4.23□□□□□ -1.73
SMARCB1-208ENST00000634926 RIMBP3BA6NNM3 1639 aa4.23□□□□□ -1.73
SMARCB1-208ENST00000634926 TARBP1Q13395 1621 aaKnown RBP4.23□□□□□ -1.73
SMARCB1-208ENST00000634926 RIMBP3Q9UFD9 1639 aa4.23□□□□□ -1.73
SMARCB1-208ENST00000634926 NUDT19A8MXV4 375 aa4.22□□□□□ -1.73
SMARCB1-208ENST00000634926 DNAJA2O60884 412 aa4.22□□□□□ -1.73
SMARCB1-208ENST00000634926 TFE3P19532 575 aaPredicted RBP4.22□□□□□ -1.73
SMARCB1-208ENST00000634926 RTP1P59025 263 aa4.22□□□□□ -1.73
SMARCB1-208ENST00000634926 DLX2Q07687 328 aaPredicted RBP4.22□□□□□ -1.73
SMARCB1-208ENST00000634926 RAB3GAP1Q15042 981 aa4.22□□□□□ -1.73
SMARCB1-208ENST00000634926 MAP3K11Q16584 847 aa4.22□□□□□ -1.73
SMARCB1-208ENST00000634926 LIPIQ6XZB0 460 aa4.22□□□□□ -1.73
SMARCB1-208ENST00000634926 FAM13CQ8NE31 585 aa4.22□□□□□ -1.73
SMARCB1-208ENST00000634926 ZNF526Q8TF50 670 aaPredicted RBP4.22□□□□□ -1.73
SMARCB1-208ENST00000634926 GZF1Q9H116 711 aaPredicted RBP4.22□□□□□ -1.73
SMARCB1-208ENST00000634926 C12orf49Q9H741 205 aa4.22□□□□□ -1.73
SMARCB1-208ENST00000634926 ADAM30Q9UKF2 790 aa4.22□□□□□ -1.73
SMARCB1-208ENST00000634926 CNOT11Q9UKZ1 510 aaKnown RBP4.22□□□□□ -1.73
SMARCB1-208ENST00000634926 MINPP1Q9UNW1 487 aa4.22□□□□□ -1.73
SMARCB1-208ENST00000634926 HCFC2Q9Y5Z7 792 aa4.22□□□□□ -1.73
SMARCB1-208ENST00000634926 TOPBP1Q92547 1522 aa4.21□□□□□ -1.73
SMARCB1-208ENST00000634926 FADS2P1A8MWK0 482 aa4.21□□□□□ -1.74
SMARCB1-208ENST00000634926 CHURC1-FNTBB4DL54 471 aa4.21□□□□□ -1.74
SMARCB1-208ENST00000634926 FKTNO75072 461 aa4.21□□□□□ -1.74
SMARCB1-208ENST00000634926 ITGB3P05106 788 aa4.21□□□□□ -1.74
SMARCB1-208ENST00000634926 CNR2P34972 360 aa4.21□□□□□ -1.74
SMARCB1-208ENST00000634926 SNW1Q13573 536 aaKnown RBP4.21□□□□□ -1.74
SMARCB1-208ENST00000634926 HSF5Q4G112 596 aaPredicted RBP4.21□□□□□ -1.74
SMARCB1-208ENST00000634926 TMCO4Q5TGY1 634 aa4.21□□□□□ -1.74
SMARCB1-208ENST00000634926 RPTNQ6XPR3 784 aa4.21□□□□□ -1.74
SMARCB1-208ENST00000634926 RNF111Q6ZNA4 994 aa4.21□□□□□ -1.74
SMARCB1-208ENST00000634926 AGMOQ6ZNB7 445 aa4.21□□□□□ -1.74
SMARCB1-208ENST00000634926 TMC3Q7Z5M5 1100 aa4.21□□□□□ -1.74
SMARCB1-208ENST00000634926 FNIP1Q8TF40 1166 aa4.21□□□□□ -1.74
SMARCB1-208ENST00000634926 TCTN2Q96GX1 697 aa4.21□□□□□ -1.74
SMARCB1-208ENST00000634926 TNFRSF12AQ9NP84 129 aa4.21□□□□□ -1.74
SMARCB1-208ENST00000634926 SMPD4Q9NXE4 827 aa4.21□□□□□ -1.74
SMARCB1-208ENST00000634926 SRRDQ9UH36 339 aa4.21□□□□□ -1.74
SMARCB1-208ENST00000634926 DNMBPQ6XZF7 1577 aa4.21□□□□□ -1.74
SMARCB1-208ENST00000634926 ZNF608Q9ULD9 1512 aaPredicted RBP4.21□□□□□ -1.74
SMARCB1-208ENST00000634926 CCDC88BA6NC98 1476 aa4.2□□□□□ -1.74
SMARCB1-208ENST00000634926 IFT140Q96RY7 1462 aa4.2□□□□□ -1.74
SMARCB1-208ENST00000634926 C1QTNF3-AMACRE9PGA6 284 aa4.2□□□□□ -1.74
SMARCB1-208ENST00000634926 NOBOXO60393 691 aa4.2□□□□□ -1.74
SMARCB1-208ENST00000634926 MPOP05164 745 aa4.2□□□□□ -1.74
SMARCB1-208ENST00000634926 ATF2P15336 505 aa4.2□□□□□ -1.74
SMARCB1-208ENST00000634926 ZNF20P17024 532 aa4.2□□□□□ -1.74
SMARCB1-208ENST00000634926 PLCG1P19174 1290 aa4.2□□□□□ -1.74
SMARCB1-208ENST00000634926 HMGA2P52926 109 aa4.2□□□□□ -1.74
SMARCB1-208ENST00000634926 RPS26P62854 115 aaKnown RBP4.2□□□□□ -1.74
SMARCB1-208ENST00000634926 CAP1Q01518 475 aa4.2□□□□□ -1.74
SMARCB1-208ENST00000634926 NMIQ13287 307 aaPredicted RBP4.2□□□□□ -1.74
SMARCB1-208ENST00000634926 CBX2Q14781 532 aaPredicted RBP4.2□□□□□ -1.74
SMARCB1-208ENST00000634926 CLEC16AQ2KHT3 1053 aa4.2□□□□□ -1.74
SMARCB1-208ENST00000634926 ZFPM1Q8IX07 1006 aa4.2□□□□□ -1.74
SMARCB1-208ENST00000634926 SYTL5Q8TDW5 730 aaPredicted RBP4.2□□□□□ -1.74
SMARCB1-208ENST00000634926 SUSD2Q9UGT4 822 aa4.2□□□□□ -1.74
SMARCB1-208ENST00000634926 DCTN4Q9UJW0 460 aa4.2□□□□□ -1.74
SMARCB1-208ENST00000634926 TCFL5Q9UL49 500 aa4.2□□□□□ -1.74
SMARCB1-208ENST00000634926 PALD1Q9ULE6 856 aa4.2□□□□□ -1.74
SMARCB1-208ENST00000634926 TTF2Q9UNY4 1162 aaKnown RBP4.2□□□□□ -1.74
SMARCB1-208ENST00000634926 CHD1O14646 1710 aa4.2□□□□□ -1.74
SMARCB1-208ENST00000634926 WDR97A6NE52 1622 aa4.2□□□□□ -1.74
SMARCB1-208ENST00000634926 ARHGEF11O15085 1522 aa4.2□□□□□ -1.74
SMARCB1-208ENST00000634926 SOWAHDA6NJG2 315 aa4.19□□□□□ -1.74
SMARCB1-208ENST00000634926 ABLIM1O14639 778 aa4.19□□□□□ -1.74
SMARCB1-208ENST00000634926 MAPK8P45983 427 aa4.19□□□□□ -1.74
SMARCB1-208ENST00000634926 LIG3P49916 1009 aa4.19□□□□□ -1.74
SMARCB1-208ENST00000634926 MFAP1P55081 439 aaKnown RBP4.19□□□□□ -1.74
SMARCB1-208ENST00000634926 ZNF200P98182 395 aaPredicted RBP4.19□□□□□ -1.74
SMARCB1-208ENST00000634926 RPL6Q02878 288 aaKnown RBP4.19□□□□□ -1.74
SMARCB1-208ENST00000634926 PDE4BQ07343 736 aa4.19□□□□□ -1.74
SMARCB1-208ENST00000634926 PLEKHN1Q494U1 663 aaPredicted RBP4.19□□□□□ -1.74
SMARCB1-208ENST00000634926 TMEM201Q5SNT2 666 aa4.19□□□□□ -1.74
SMARCB1-208ENST00000634926 B4GALNT3Q6L9W6 998 aa4.19□□□□□ -1.74
SMARCB1-208ENST00000634926 RGS22Q8NE09 1264 aa4.19□□□□□ -1.74
SMARCB1-208ENST00000634926 FBF1Q8TES7 1133 aa4.19□□□□□ -1.74
SMARCB1-208ENST00000634926 JARID2Q92833 1246 aaPredicted RBP4.19□□□□□ -1.74
SMARCB1-208ENST00000634926 C8orf49Q96NF6 230 aa4.19□□□□□ -1.74
SMARCB1-208ENST00000634926 MRIQ9BWK5 157 aa4.19□□□□□ -1.74
SMARCB1-208ENST00000634926 FAM8A1Q9UBU6 413 aa4.19□□□□□ -1.74
SMARCB1-208ENST00000634926 TLR6Q9Y2C9 796 aa4.19□□□□□ -1.74
SMARCB1-208ENST00000634926 GPR55Q9Y2T6 319 aaPredicted RBP4.19□□□□□ -1.74
SMARCB1-208ENST00000634926 CLASP1Q7Z460 1538 aa4.18□□□□□ -1.74
SMARCB1-208ENST00000634926 SYPP08247 313 aa4.18□□□□□ -1.74
SMARCB1-208ENST00000634926 MSL3P1P0C860 447 aa4.18□□□□□ -1.74
SMARCB1-208ENST00000634926 C6P13671 934 aa4.18□□□□□ -1.74
SMARCB1-208ENST00000634926 PRKCAP17252 672 aa4.18□□□□□ -1.74
SMARCB1-208ENST00000634926 TGM1P22735 817 aa4.18□□□□□ -1.74
SMARCB1-208ENST00000634926 HTRA3P83110 453 aa4.18□□□□□ -1.74
SMARCB1-208ENST00000634926 FMR1Q06787 632 aaKnown RBP eCLIP4.18□□□□□ -1.74
SMARCB1-208ENST00000634926 CCDC85BQ15834 202 aaPredicted RBP4.18□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms