RNA–Protein interactions for RNA: ENST00000632421.1

PHACTR4-206, Transcript of phosphatase and actin regulator 4, humanhuman

TSL 2

Gene PHACTR4, Length 3,375 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR4-206ENST00000632421 PPP4R3BQ5MIZ7 849 aa13.88□□□□□ -0.19
PHACTR4-206ENST00000632421 USP17L2Q6R6M4 530 aa13.88□□□□□ -0.19
PHACTR4-206ENST00000632421 RRP36Q96EU6 259 aaKnown RBP13.88□□□□□ -0.19
PHACTR4-206ENST00000632421 TMX4Q9H1E5 349 aaPredicted RBP13.88□□□□□ -0.19
PHACTR4-206ENST00000632421 TTF2Q9UNY4 1162 aaKnown RBP13.88□□□□□ -0.19
PHACTR4-206ENST00000632421 QSER1Q2KHR3 1735 aa13.87□□□□□ -0.19
PHACTR4-206ENST00000632421 PLSCR1O15162 318 aa13.87□□□□□ -0.19
PHACTR4-206ENST00000632421 SMARCA1P28370 1054 aa13.87□□□□□ -0.19
PHACTR4-206ENST00000632421 NAPAP54920 295 aa13.87□□□□□ -0.19
PHACTR4-206ENST00000632421 DMTNQ08495 405 aa13.87□□□□□ -0.19
PHACTR4-206ENST00000632421 PLIN4Q96Q06 1357 aa13.87□□□□□ -0.19
PHACTR4-206ENST00000632421 CPVLQ9H3G5 476 aa13.87□□□□□ -0.19
PHACTR4-206ENST00000632421 TMEM232C9JQI7 657 aa13.87□□□□□ -0.19
PHACTR4-206ENST00000632421 PTPN14Q15678 1187 aa13.87□□□□□ -0.19
PHACTR4-206ENST00000632421 DOK7Q18PE1 504 aa13.87□□□□□ -0.19
PHACTR4-206ENST00000632421 INF2Q27J81 1249 aa13.87□□□□□ -0.19
PHACTR4-206ENST00000632421 PDXDC2PQ6P474 469 aa13.87□□□□□ -0.19
PHACTR4-206ENST00000632421 MED15Q96RN5 788 aa13.87□□□□□ -0.19
PHACTR4-206ENST00000632421 ZMYND12Q9H0C1 365 aa13.87□□□□□ -0.19
PHACTR4-206ENST00000632421 INTS13Q9NVM9 706 aa13.87□□□□□ -0.19
PHACTR4-206ENST00000632421 TRMT1Q9NXH9 659 aaKnown RBP13.87□□□□□ -0.19
PHACTR4-206ENST00000632421 SEC63Q9UGP8 760 aaKnown RBP13.87□□□□□ -0.19
PHACTR4-206ENST00000632421 PAXBP1Q9Y5B6 917 aa13.87□□□□□ -0.19
PHACTR4-206ENST00000632421 KCNJ6P48051 423 aa13.86□□□□□ -0.19
PHACTR4-206ENST00000632421 GABPAQ06546 454 aa13.86□□□□□ -0.19
PHACTR4-206ENST00000632421 CEP135Q66GS9 1140 aa13.86□□□□□ -0.19
PHACTR4-206ENST00000632421 FLAD1Q8NFF5 587 aa13.86□□□□□ -0.19
PHACTR4-206ENST00000632421 PARP3Q9Y6F1 533 aa13.86□□□□□ -0.19
PHACTR4-206ENST00000632421 G3V3G9 751 aa13.86□□□□□ -0.19
PHACTR4-206ENST00000632421 APBA3O96018 575 aa13.86□□□□□ -0.19
PHACTR4-206ENST00000632421 MMP10P09238 476 aa13.86□□□□□ -0.19
PHACTR4-206ENST00000632421 DCAF8Q5TAQ9 597 aa13.86□□□□□ -0.19
PHACTR4-206ENST00000632421 DTHD1Q6ZMT9 781 aa13.86□□□□□ -0.19
PHACTR4-206ENST00000632421 NYAP1Q6ZVC0 841 aa13.86□□□□□ -0.19
PHACTR4-206ENST00000632421 HOMER1Q86YM7 354 aa13.86□□□□□ -0.19
PHACTR4-206ENST00000632421 MASTLQ96GX5 879 aa13.86□□□□□ -0.19
PHACTR4-206ENST00000632421 COL11A2P13942 1736 aaPredicted RBP13.86□□□□□ -0.19
PHACTR4-206ENST00000632421 SYNRGQ9UMZ2 1314 aa13.86□□□□□ -0.19
PHACTR4-206ENST00000632421 KLHL10Q6JEL2 608 aa13.86□□□□□ -0.19
PHACTR4-206ENST00000632421 CCDC112Q8NEF3 446 aa13.86□□□□□ -0.19
PHACTR4-206ENST00000632421 STAMQ92783 540 aa13.86□□□□□ -0.19
PHACTR4-206ENST00000632421 C6orf50Q9HD87 102 aa13.86□□□□□ -0.19
PHACTR4-206ENST00000632421 SAMSN1Q9NSI8 373 aaKnown RBP13.86□□□□□ -0.19
PHACTR4-206ENST00000632421 USP17L5A8MUK1 530 aa13.85□□□□□ -0.19
PHACTR4-206ENST00000632421 GTPBP6O43824 516 aaPredicted RBP13.85□□□□□ -0.19
PHACTR4-206ENST00000632421 CUL4BQ13620 913 aa13.85□□□□□ -0.19
PHACTR4-206ENST00000632421 SPATA1Q5VX52 437 aa13.85□□□□□ -0.19
PHACTR4-206ENST00000632421 KRT25Q7Z3Z0 450 aa13.85□□□□□ -0.19
PHACTR4-206ENST00000632421 MXD3Q9BW11 206 aa13.85□□□□□ -0.19
PHACTR4-206ENST00000632421 DDX4Q9NQI0 724 aaKnown RBP13.85□□□□□ -0.19
PHACTR4-206ENST00000632421 USP40Q9NVE5 1235 aa13.85□□□□□ -0.19
PHACTR4-206ENST00000632421 MTMR4Q9NYA4 1195 aa13.85□□□□□ -0.19
PHACTR4-206ENST00000632421 MYH8P13535 1937 aa13.85□□□□□ -0.19
PHACTR4-206ENST00000632421 LAD1O00515 517 aa13.85□□□□□ -0.19
PHACTR4-206ENST00000632421 CD44P16070 742 aaKnown RBP13.85□□□□□ -0.19
PHACTR4-206ENST00000632421 GNA11P29992 359 aa13.85□□□□□ -0.19
PHACTR4-206ENST00000632421 SOGA3Q5TF21 947 aa13.85□□□□□ -0.19
PHACTR4-206ENST00000632421 SMCO2A6NFE2 343 aa13.85□□□□□ -0.19
PHACTR4-206ENST00000632421 SCNN1DP51172 638 aa13.85□□□□□ -0.19
PHACTR4-206ENST00000632421 E4F1Q66K89 784 aaPredicted RBP13.85□□□□□ -0.19
PHACTR4-206ENST00000632421 BLZF1Q9H2G9 400 aa13.85□□□□□ -0.19
PHACTR4-206ENST00000632421 TMEM60Q9H2L4 133 aa13.85□□□□□ -0.19
PHACTR4-206ENST00000632421 VAT1LQ9HCJ6 419 aa13.85□□□□□ -0.19
PHACTR4-206ENST00000632421 PSDA5PKW4 1024 aaPredicted RBP13.84□□□□□ -0.19
PHACTR4-206ENST00000632421 PDHBP11177 359 aa13.84□□□□□ -0.19
PHACTR4-206ENST00000632421 AKR1B1P15121 316 aa13.84□□□□□ -0.19
PHACTR4-206ENST00000632421 STAT6P42226 847 aa13.84□□□□□ -0.19
PHACTR4-206ENST00000632421 ZNF592Q92610 1267 aa13.84□□□□□ -0.19
PHACTR4-206ENST00000632421 PIGSQ96S52 555 aa13.84□□□□□ -0.19
PHACTR4-206ENST00000632421 SWAP70Q9UH65 585 aa13.84□□□□□ -0.19
PHACTR4-206ENST00000632421 SERPINB13Q9UIV8 391 aa13.84□□□□□ -0.19
PHACTR4-206ENST00000632421 PPP1R3GB7ZBB8 358 aa13.84□□□□□ -0.19
PHACTR4-206ENST00000632421 MAPK8IP2Q13387 824 aaPredicted RBP13.84□□□□□ -0.19
PHACTR4-206ENST00000632421 NONOQ15233 471 aaKnown RBP eCLIP13.84□□□□□ -0.19
PHACTR4-206ENST00000632421 HHIPL2Q6UWX4 724 aa13.84□□□□□ -0.19
PHACTR4-206ENST00000632421 SMYD4Q8IYR2 804 aaPredicted RBP13.84□□□□□ -0.19
PHACTR4-206ENST00000632421 TEKT1Q969V4 418 aa13.84□□□□□ -0.19
PHACTR4-206ENST00000632421 MTRQ99707 1265 aa13.84□□□□□ -0.19
PHACTR4-206ENST00000632421 DISC1Q9NRI5 854 aa13.84□□□□□ -0.19
PHACTR4-206ENST00000632421 KIF2AO00139 706 aaPredicted RBP13.83□□□□□ -0.19
PHACTR4-206ENST00000632421 CDC25AP30304 524 aa13.83□□□□□ -0.19
PHACTR4-206ENST00000632421 PRPHP41219 470 aa13.83□□□□□ -0.19
PHACTR4-206ENST00000632421 STX17P56962 302 aa13.83□□□□□ -0.19
PHACTR4-206ENST00000632421 KARSQ15046 597 aaKnown RBP13.83□□□□□ -0.19
PHACTR4-206ENST00000632421 PTPN21Q16825 1174 aa13.83□□□□□ -0.19
PHACTR4-206ENST00000632421 ASPRV1Q53RT3 343 aa13.83□□□□□ -0.19
PHACTR4-206ENST00000632421 SPECC1LQ69YQ0 1117 aa13.83□□□□□ -0.19
PHACTR4-206ENST00000632421 UBA5Q9GZZ9 404 aa13.83□□□□□ -0.19
PHACTR4-206ENST00000632421 RIOX1Q9H6W3 641 aa13.83□□□□□ -0.19
PHACTR4-206ENST00000632421 MYO3BQ8WXR4 1341 aa13.83□□□□□ -0.2
PHACTR4-206ENST00000632421 IGKV6D-41A0A0C4DH26 115 aa13.83□□□□□ -0.2
PHACTR4-206ENST00000632421 CDC42EP5Q6NZY7 148 aa13.83□□□□□ -0.2
PHACTR4-206ENST00000632421 LRRC47Q8N1G4 583 aaKnown RBP13.83□□□□□ -0.2
PHACTR4-206ENST00000632421 RASSF8Q8NHQ8 419 aa13.83□□□□□ -0.2
PHACTR4-206ENST00000632421 ZNF622Q969S3 477 aaKnown RBP eCLIP13.83□□□□□ -0.21e-8■■■■□ 19.3
PHACTR4-206ENST00000632421 PPP1R13BQ96KQ4 1090 aa13.83□□□□□ -0.2
PHACTR4-206ENST00000632421 RMND1Q9NWS8 449 aa13.83□□□□□ -0.2
PHACTR4-206ENST00000632421 FRMPD2Q68DX3 1309 aaPredicted RBP13.83□□□□□ -0.2
PHACTR4-206ENST00000632421 hCG_1984214I3L0E3 225 aa13.83□□□□□ -0.2
PHACTR4-206ENST00000632421 TBX2Q13207 712 aaPredicted RBP13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms