RNA–Protein interactions for RNA: ENST00000629670.1

CCDC163-208, Transcript of coiled-coil domain containing 163, humanhuman

TSL 3

Gene CCDC163, Length 919 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC163-208ENST00000629670 ROBO3Q96MS0 1386 aa13.3□□□□□ -0.28
CCDC163-208ENST00000629670 LAMA3Q16787 3333 aa13.29□□□□□ -0.28
CCDC163-208ENST00000629670 ATP2A1O14983 1001 aa13.29□□□□□ -0.28
CCDC163-208ENST00000629670 PRDM1O75626 825 aa13.29□□□□□ -0.28
CCDC163-208ENST00000629670 FDX1P10109 184 aa13.29□□□□□ -0.28
CCDC163-208ENST00000629670 SNX17Q15036 470 aa13.29□□□□□ -0.28
CCDC163-208ENST00000629670 FAM109BQ6ICB4 259 aaPredicted RBP13.29□□□□□ -0.28
CCDC163-208ENST00000629670 IFNL3Q8IZI9 196 aa13.29□□□□□ -0.28
CCDC163-208ENST00000629670 ANKRD35Q8N283 1001 aa13.29□□□□□ -0.28
CCDC163-208ENST00000629670 REPS2Q8NFH8 660 aa13.29□□□□□ -0.28
CCDC163-208ENST00000629670 MKL1Q969V6 931 aa13.29□□□□□ -0.28
CCDC163-208ENST00000629670 NAPBQ9H115 298 aa13.29□□□□□ -0.28
CCDC163-208ENST00000629670 MTMR4Q9NYA4 1195 aa13.29□□□□□ -0.28
CCDC163-208ENST00000629670 RLFQ13129 1914 aa13.29□□□□□ -0.28
CCDC163-208ENST00000629670 M0R2C6 588 aa13.28□□□□□ -0.28
CCDC163-208ENST00000629670 DLL1O00548 723 aa13.28□□□□□ -0.28
CCDC163-208ENST00000629670 PGK1P00558 417 aa13.28□□□□□ -0.28
CCDC163-208ENST00000629670 TLE2Q04725 743 aa13.28□□□□□ -0.28
CCDC163-208ENST00000629670 GMCL1P1Q8NEA9 526 aa13.28□□□□□ -0.28
CCDC163-208ENST00000629670 CHST13Q8NET6 341 aa13.28□□□□□ -0.28
CCDC163-208ENST00000629670 CHURC1Q8WUH1 139 aa13.28□□□□□ -0.28
CCDC163-208ENST00000629670 NUP133Q8WUM0 1156 aa13.28□□□□□ -0.28
CCDC163-208ENST00000629670 BADQ92934 168 aa13.28□□□□□ -0.28
CCDC163-208ENST00000629670 CEP95Q96GE4 821 aa13.28□□□□□ -0.28
CCDC163-208ENST00000629670 TSEN34Q9BSV6 310 aaKnown RBP13.28□□□□□ -0.28
CCDC163-208ENST00000629670 SPC25Q9HBM1 224 aa13.28□□□□□ -0.28
CCDC163-208ENST00000629670 ZHX1Q9UKY1 873 aaPredicted RBP13.28□□□□□ -0.28
CCDC163-208ENST00000629670 MYH7P12883 1935 aa13.28□□□□□ -0.28
CCDC163-208ENST00000629670 SYNGAP1Q96PV0 1343 aa13.28□□□□□ -0.28
CCDC163-208ENST00000629670 FRMPD3Q5JV73 1810 aa13.27□□□□□ -0.28
CCDC163-208ENST00000629670 IGKV6D-41A0A0C4DH26 115 aa13.27□□□□□ -0.29
CCDC163-208ENST00000629670 CLTBP09497 229 aa13.27□□□□□ -0.29
CCDC163-208ENST00000629670 ZNF865P0CJ78 1059 aaPredicted RBP13.27□□□□□ -0.29
CCDC163-208ENST00000629670 BMP3P12645 472 aa13.27□□□□□ -0.29
CCDC163-208ENST00000629670 TAL1P17542 331 aaPredicted RBP13.27□□□□□ -0.29
CCDC163-208ENST00000629670 OAZ1P54368 228 aa13.27□□□□□ -0.29
CCDC163-208ENST00000629670 TFAP4Q01664 338 aa13.27□□□□□ -0.29
CCDC163-208ENST00000629670 IKQ13123 557 aaPredicted RBP13.27□□□□□ -0.29
CCDC163-208ENST00000629670 ZNF697Q5TEC3 545 aa13.27□□□□□ -0.29
CCDC163-208ENST00000629670 SLFN13Q68D06 897 aa13.27□□□□□ -0.29
CCDC163-208ENST00000629670 MAMDC4Q6UXC1 1216 aa13.27□□□□□ -0.29
CCDC163-208ENST00000629670 ZNF467Q7Z7K2 595 aaPredicted RBP13.27□□□□□ -0.29
CCDC163-208ENST00000629670 NEDD1Q8NHV4 660 aa13.27□□□□□ -0.29
CCDC163-208ENST00000629670 SLC38A10Q9HBR0 1119 aa13.27□□□□□ -0.29
CCDC163-208ENST00000629670 RAVER2Q9HCJ3 691 aaKnown RBP13.27□□□□□ -0.29
CCDC163-208ENST00000629670 EPB41L4AQ9HCS5 686 aaPredicted RBP13.27□□□□□ -0.29
CCDC163-208ENST00000629670 PDLIM7Q9NR12 457 aa13.27□□□□□ -0.29
CCDC163-208ENST00000629670 A0A1W2PQ45 241 aaPredicted RBP13.26□□□□□ -0.29
CCDC163-208ENST00000629670 A0A1W2PQY0 241 aa13.26□□□□□ -0.29
CCDC163-208ENST00000629670 MOXD2PA6NHM9 499 aa13.26□□□□□ -0.29
CCDC163-208ENST00000629670 DCDC2CA8MYV0 355 aa13.26□□□□□ -0.29
CCDC163-208ENST00000629670 POTEB2H3BUK9 544 aa13.26□□□□□ -0.29
CCDC163-208ENST00000629670 RAG1P15918 1043 aa13.26□□□□□ -0.29
CCDC163-208ENST00000629670 MX1P20591 662 aa13.26□□□□□ -0.29
CCDC163-208ENST00000629670 PPARAQ07869 468 aa13.26□□□□□ -0.29
CCDC163-208ENST00000629670 SHHQ15465 462 aa13.26□□□□□ -0.29
CCDC163-208ENST00000629670 FAM160B2Q86V87 743 aa13.26□□□□□ -0.29
CCDC163-208ENST00000629670 LRRC47Q8N1G4 583 aaKnown RBP13.26□□□□□ -0.29
CCDC163-208ENST00000629670 PCSK9Q8NBP7 692 aaKnown RBP13.26□□□□□ -0.29
CCDC163-208ENST00000629670 ABHD16BQ9H3Z7 469 aa13.26□□□□□ -0.29
CCDC163-208ENST00000629670 STARD7Q9NQZ5 370 aa13.26□□□□□ -0.29
CCDC163-208ENST00000629670 TMEM39AQ9NV64 488 aa13.26□□□□□ -0.29
CCDC163-208ENST00000629670 RIPK3Q9Y572 518 aa13.26□□□□□ -0.29
CCDC163-208ENST00000629670 DNAJC25-GNG10A0A024R161 153 aa13.25□□□□□ -0.29
CCDC163-208ENST00000629670 TSPY2A6NKD2 308 aa13.25□□□□□ -0.29
CCDC163-208ENST00000629670 TMEM232C9JQI7 657 aa13.25□□□□□ -0.29
CCDC163-208ENST00000629670 PQBP1O60828 265 aaKnown RBP13.25□□□□□ -0.29
CCDC163-208ENST00000629670 DUSP11O75319 330 aaKnown RBP13.25□□□□□ -0.29
CCDC163-208ENST00000629670 SLC1A4P43007 532 aa13.25□□□□□ -0.29
CCDC163-208ENST00000629670 STAT2P52630 851 aa13.25□□□□□ -0.29
CCDC163-208ENST00000629670 ACLYP53396 1101 aa13.25□□□□□ -0.29
CCDC163-208ENST00000629670 ACVR2BQ13705 512 aa13.25□□□□□ -0.29
CCDC163-208ENST00000629670 ZMYM1Q5SVZ6 1142 aa13.25□□□□□ -0.29
CCDC163-208ENST00000629670 VTI1AQ96AJ9 217 aa13.25□□□□□ -0.29
CCDC163-208ENST00000629670 GLT1D1Q96MS3 346 aa13.25□□□□□ -0.29
CCDC163-208ENST00000629670 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.25□□□□□ -0.29
CCDC163-208ENST00000629670 PLIN4Q96Q06 1357 aa13.24□□□□□ -0.29
CCDC163-208ENST00000629670 MROH7Q68CQ1 1323 aa13.24□□□□□ -0.29
CCDC163-208ENST00000629670 SYNRGQ9UMZ2 1314 aa13.24□□□□□ -0.29
CCDC163-208ENST00000629670 TRIM43BA6NCK2 446 aa13.24□□□□□ -0.29
CCDC163-208ENST00000629670 ADAMTS4O75173 837 aa13.24□□□□□ -0.29
CCDC163-208ENST00000629670 SNAI1O95863 264 aaPredicted RBP13.24□□□□□ -0.29
CCDC163-208ENST00000629670 TKFCQ3LXA3 575 aa13.24□□□□□ -0.29
CCDC163-208ENST00000629670 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.24□□□□□ -0.29
CCDC163-208ENST00000629670 SH3RF1Q7Z6J0 888 aa13.24□□□□□ -0.29
CCDC163-208ENST00000629670 PI4K2BQ8TCG2 481 aa13.24□□□□□ -0.29
CCDC163-208ENST00000629670 STAG1Q8WVM7 1258 aa13.24□□□□□ -0.29
CCDC163-208ENST00000629670 TRIM43Q96BQ3 446 aaPredicted RBP13.24□□□□□ -0.29
CCDC163-208ENST00000629670 GMCL1Q96IK5 515 aa13.24□□□□□ -0.29
CCDC163-208ENST00000629670 TOX2Q96NM4 488 aa13.24□□□□□ -0.29
CCDC163-208ENST00000629670 SEC62Q99442 399 aaKnown RBP13.24□□□□□ -0.29
CCDC163-208ENST00000629670 ACAD9Q9H845 621 aa13.24□□□□□ -0.29
CCDC163-208ENST00000629670 HOMER2Q9NSB8 354 aa13.24□□□□□ -0.29
CCDC163-208ENST00000629670 STX8Q9UNK0 236 aa13.24□□□□□ -0.29
CCDC163-208ENST00000629670 PCDHB15Q9Y5E8 787 aa13.24□□□□□ -0.29
CCDC163-208ENST00000629670 KIAA0355O15063 1070 aa13.23□□□□□ -0.29
CCDC163-208ENST00000629670 C6orf222P0C671 652 aaPredicted RBP13.23□□□□□ -0.29
CCDC163-208ENST00000629670 SMAD3P84022 425 aaKnown RBP13.23□□□□□ -0.29
CCDC163-208ENST00000629670 FPGSQ05932 587 aa13.23□□□□□ -0.29
CCDC163-208ENST00000629670 KCNA10Q16322 511 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms