RNA–Protein interactions for RNA: ENST00000628118.1

CHD2-213, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 1 (best)

Gene CHD2, Length 585 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-213ENST00000628118 SLC25A27O95847 323 aa9.41□□□□□ -0.9
CHD2-213ENST00000628118 PDHBP11177 359 aa9.41□□□□□ -0.9
CHD2-213ENST00000628118 MAPK4P31152 587 aa9.41□□□□□ -0.9
CHD2-213ENST00000628118 LIFRP42702 1097 aa9.41□□□□□ -0.9
CHD2-213ENST00000628118 ANAPC15P60006 121 aa9.41□□□□□ -0.9
CHD2-213ENST00000628118 ASPRV1Q53RT3 343 aa9.41□□□□□ -0.9
CHD2-213ENST00000628118 BTNL9Q6UXG8 535 aa9.41□□□□□ -0.9
CHD2-213ENST00000628118 DHX32Q7L7V1 743 aaKnown RBP9.41□□□□□ -0.9
CHD2-213ENST00000628118 SHCBP1Q8NEM2 672 aa9.41□□□□□ -0.9
CHD2-213ENST00000628118 IGDCC4Q8TDY8 1250 aa9.41□□□□□ -0.9
CHD2-213ENST00000628118 MAP3K14Q99558 947 aa9.41□□□□□ -0.9
CHD2-213ENST00000628118 ZKSCAN3Q9BRR0 538 aa9.41□□□□□ -0.9
CHD2-213ENST00000628118 EFCC1Q9HA90 598 aa9.41□□□□□ -0.9
CHD2-213ENST00000628118 RBPJLQ9UBG7 517 aa9.41□□□□□ -0.9
CHD2-213ENST00000628118 TRPC6Q9Y210 931 aa9.41□□□□□ -0.9
CHD2-213ENST00000628118 CTDP1Q9Y5B0 961 aaPredicted RBP9.41□□□□□ -0.9
CHD2-213ENST00000628118 RLFQ13129 1914 aa9.41□□□□□ -0.9
CHD2-213ENST00000628118 PARP14Q460N5 1801 aa9.4□□□□□ -0.9
CHD2-213ENST00000628118 TMEM232C9JQI7 657 aa9.4□□□□□ -0.9
CHD2-213ENST00000628118 VWA5AO00534 786 aa9.4□□□□□ -0.9
CHD2-213ENST00000628118 RIOK3O14730 519 aaKnown RBP9.4□□□□□ -0.9
CHD2-213ENST00000628118 PRC1O43663 620 aa9.4□□□□□ -0.9
CHD2-213ENST00000628118 ZBED4O75132 1171 aa9.4□□□□□ -0.9
CHD2-213ENST00000628118 DDAH1O94760 285 aa9.4□□□□□ -0.9
CHD2-213ENST00000628118 CALM1P0DP23 149 aa9.4□□□□□ -0.9
CHD2-213ENST00000628118 CALM2P0DP24 149 aa9.4□□□□□ -0.9
CHD2-213ENST00000628118 CALM3P0DP25 149 aa9.4□□□□□ -0.9
CHD2-213ENST00000628118 PSMC4P43686 418 aa9.4□□□□□ -0.9
CHD2-213ENST00000628118 RCAN1P53805 252 aa9.4□□□□□ -0.9
CHD2-213ENST00000628118 ZNF543Q08ER8 600 aa9.4□□□□□ -0.9
CHD2-213ENST00000628118 CCDC96Q2M329 555 aa9.4□□□□□ -0.9
CHD2-213ENST00000628118 TMEM67Q5HYA8 995 aa9.4□□□□□ -0.9
CHD2-213ENST00000628118 CATIPQ7Z7H3 387 aa9.4□□□□□ -0.9
CHD2-213ENST00000628118 CCAR1Q8IX12 1150 aaKnown RBP9.4□□□□□ -0.9
CHD2-213ENST00000628118 FBXL16Q8N461 479 aa9.4□□□□□ -0.9
CHD2-213ENST00000628118 IL27Q8NEV9 243 aa9.4□□□□□ -0.9
CHD2-213ENST00000628118 CD99L2Q8TCZ2 262 aa9.4□□□□□ -0.9
CHD2-213ENST00000628118 COA7Q96BR5 231 aa9.4□□□□□ -0.9
CHD2-213ENST00000628118 TM6SF1Q9BZW5 370 aa9.4□□□□□ -0.9
CHD2-213ENST00000628118 TRIM17Q9Y577 477 aa9.4□□□□□ -0.9
CHD2-213ENST00000628118 SNX14Q9Y5W7 946 aa9.4□□□□□ -0.9
CHD2-213ENST00000628118 A0A0G2JMZ2 1700 aa9.39□□□□□ -0.91
CHD2-213ENST00000628118 MGAMO43451 1857 aa9.39□□□□□ -0.91
CHD2-213ENST00000628118 SH2B2O14492 632 aaPredicted RBP9.39□□□□□ -0.91
CHD2-213ENST00000628118 TNPO2O14787 897 aaKnown RBP9.39□□□□□ -0.91
CHD2-213ENST00000628118 STRNO43815 780 aa9.39□□□□□ -0.91
CHD2-213ENST00000628118 CNMDO75829 334 aa9.39□□□□□ -0.91
CHD2-213ENST00000628118 FMNL1O95466 1100 aaPredicted RBP9.39□□□□□ -0.91
CHD2-213ENST00000628118 PARP1P09874 1014 aaKnown RBP9.39□□□□□ -0.91
CHD2-213ENST00000628118 GNAQP50148 359 aa9.39□□□□□ -0.91
CHD2-213ENST00000628118 ANTXR2P58335 489 aa9.39□□□□□ -0.91
CHD2-213ENST00000628118 EXOSC10Q01780 885 aaKnown RBP9.39□□□□□ -0.91
CHD2-213ENST00000628118 IKQ13123 557 aaPredicted RBP9.39□□□□□ -0.91
CHD2-213ENST00000628118 TKFCQ3LXA3 575 aa9.39□□□□□ -0.91
CHD2-213ENST00000628118 FBXO46Q6PJ61 603 aaPredicted RBP9.39□□□□□ -0.91
CHD2-213ENST00000628118 BLOC1S2Q6QNY1 142 aa9.39□□□□□ -0.91
CHD2-213ENST00000628118 SYNE3Q6ZMZ3 975 aa9.39□□□□□ -0.91
CHD2-213ENST00000628118 OTOP1Q7RTM1 612 aa9.39□□□□□ -0.91
CHD2-213ENST00000628118 SGMS1Q86VZ5 419 aa9.39□□□□□ -0.91
CHD2-213ENST00000628118 RIOX2Q8IUF8 465 aa9.39□□□□□ -0.91
CHD2-213ENST00000628118 NKX2-3Q8TAU0 364 aa9.39□□□□□ -0.91
CHD2-213ENST00000628118 SOCS4Q8WXH5 440 aa9.39□□□□□ -0.91
CHD2-213ENST00000628118 ATG4CQ96DT6 458 aa9.39□□□□□ -0.91
CHD2-213ENST00000628118 IL17RAQ96F46 866 aa9.39□□□□□ -0.91
CHD2-213ENST00000628118 NUP88Q99567 741 aaPredicted RBP9.39□□□□□ -0.91
CHD2-213ENST00000628118 PAGR1Q9BTK6 254 aa9.39□□□□□ -0.91
CHD2-213ENST00000628118 TEX13BQ9BXU2 312 aa9.39□□□□□ -0.91
CHD2-213ENST00000628118 MAF1Q9H063 256 aa9.39□□□□□ -0.91
CHD2-213ENST00000628118 SPATC1LQ9H0A9 340 aa9.39□□□□□ -0.91
CHD2-213ENST00000628118 MROH8Q9H579 483 aa9.39□□□□□ -0.91
CHD2-213ENST00000628118 LY9Q9HBG7 655 aa9.39□□□□□ -0.91
CHD2-213ENST00000628118 SLC38A10Q9HBR0 1119 aa9.39□□□□□ -0.91
CHD2-213ENST00000628118 TXNRD2Q9NNW7 524 aa9.39□□□□□ -0.91
CHD2-213ENST00000628118 ISY1Q9ULR0 285 aaKnown RBP9.39□□□□□ -0.91
CHD2-213ENST00000628118 TAF6LQ9Y6J9 622 aa9.39□□□□□ -0.91
CHD2-213ENST00000628118 CCDC69A6NI79 296 aa9.38□□□□□ -0.91
CHD2-213ENST00000628118 SMARCA1P28370 1054 aa9.38□□□□□ -0.91
CHD2-213ENST00000628118 KIF5BP33176 963 aa9.38□□□□□ -0.91
CHD2-213ENST00000628118 TIE1P35590 1138 aa9.38□□□□□ -0.91
CHD2-213ENST00000628118 STAT3P40763 770 aa9.38□□□□□ -0.91
CHD2-213ENST00000628118 TRAF1Q13077 416 aa9.38□□□□□ -0.91
CHD2-213ENST00000628118 IRF5Q13568 498 aa9.38□□□□□ -0.91
CHD2-213ENST00000628118 GRM4Q14833 912 aa9.38□□□□□ -0.91
CHD2-213ENST00000628118 PPP2R5BQ15173 497 aa9.38□□□□□ -0.91
CHD2-213ENST00000628118 Q3C1V9 767 aa9.38□□□□□ -0.91
CHD2-213ENST00000628118 C8orf34Q49A92 452 aa9.38□□□□□ -0.91
CHD2-213ENST00000628118 SYDE2Q5VT97 1194 aa9.38□□□□□ -0.91
CHD2-213ENST00000628118 KCTD1Q719H9 257 aa9.38□□□□□ -0.91
CHD2-213ENST00000628118 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.38□□□□□ -0.91
CHD2-213ENST00000628118 PLEKHH3Q7Z736 793 aa9.38□□□□□ -0.91
CHD2-213ENST00000628118 ABRAQ8N0Z2 381 aa9.38□□□□□ -0.91
CHD2-213ENST00000628118 REPS2Q8NFH8 660 aa9.38□□□□□ -0.91
CHD2-213ENST00000628118 KIFC2Q96AC6 838 aa9.38□□□□□ -0.91
CHD2-213ENST00000628118 JAKMIP1Q96N16 626 aaKnown RBP9.38□□□□□ -0.91
CHD2-213ENST00000628118 DCBLD2Q96PD2 775 aa9.38□□□□□ -0.91
CHD2-213ENST00000628118 NUDT12Q9BQG2 462 aa9.38□□□□□ -0.91
CHD2-213ENST00000628118 LZTS2Q9BRK4 669 aa9.38□□□□□ -0.91
CHD2-213ENST00000628118 RANBP17Q9H2T7 1088 aaKnown RBP9.38□□□□□ -0.91
CHD2-213ENST00000628118 CWC22Q9HCG8 908 aaKnown RBP9.38□□□□□ -0.91
CHD2-213ENST00000628118 FBXO28Q9NVF7 368 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms