RNA–Protein interactions for RNA: ENST00000625926.1

SSBP4-215, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5 BASIC

Gene SSBP4, Length 162 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-215ENST00000625926 FDX1P10109 184 aa12.83□□□□□ -0.36
SSBP4-215ENST00000625926 SLC1A4P43007 532 aa12.83□□□□□ -0.36
SSBP4-215ENST00000625926 SNRNP48Q6IEG0 339 aaKnown RBP12.83□□□□□ -0.36
SSBP4-215ENST00000625926 CPXCR1Q8N123 301 aa12.83□□□□□ -0.36
SSBP4-215ENST00000625926 TRPV1Q8NER1 839 aa12.83□□□□□ -0.36
SSBP4-215ENST00000625926 GMCL1Q96IK5 515 aa12.83□□□□□ -0.36
SSBP4-215ENST00000625926 SLC38A10Q9HBR0 1119 aa12.83□□□□□ -0.36
SSBP4-215ENST00000625926 TOMM22Q9NS69 142 aa12.83□□□□□ -0.36
SSBP4-215ENST00000625926 DIS3Q9Y2L1 958 aaKnown RBP12.83□□□□□ -0.36
SSBP4-215ENST00000625926 HIP1O00291 1037 aa12.82□□□□□ -0.36
SSBP4-215ENST00000625926 NMT2O60551 498 aa12.82□□□□□ -0.36
SSBP4-215ENST00000625926 COL6A1P12109 1028 aa12.82□□□□□ -0.36
SSBP4-215ENST00000625926 MCCP23508 829 aa12.82□□□□□ -0.36
SSBP4-215ENST00000625926 SLC4A3P48751 1232 aa12.82□□□□□ -0.36
SSBP4-215ENST00000625926 OAZ1P54368 228 aa12.82□□□□□ -0.36
SSBP4-215ENST00000625926 ZNF792Q3KQV3 632 aa12.82□□□□□ -0.36
SSBP4-215ENST00000625926 RRP12Q5JTH9 1297 aaKnown RBP12.82□□□□□ -0.36
SSBP4-215ENST00000625926 CHRDL2Q6WN34 429 aa12.82□□□□□ -0.36
SSBP4-215ENST00000625926 FAM160B2Q86V87 743 aa12.82□□□□□ -0.36
SSBP4-215ENST00000625926 CHURC1Q8WUH1 139 aa12.82□□□□□ -0.36
SSBP4-215ENST00000625926 STAG1Q8WVM7 1258 aa12.82□□□□□ -0.36
SSBP4-215ENST00000625926 RAVER2Q9HCJ3 691 aaKnown RBP12.82□□□□□ -0.36
SSBP4-215ENST00000625926 DIAPH3Q9NSV4 1193 aa12.82□□□□□ -0.36
SSBP4-215ENST00000625926 NRBP1Q9UHY1 535 aa12.82□□□□□ -0.36
SSBP4-215ENST00000625926 ISY1Q9ULR0 285 aaKnown RBP12.82□□□□□ -0.36
SSBP4-215ENST00000625926 RIPK3Q9Y572 518 aa12.82□□□□□ -0.36
SSBP4-215ENST00000625926 TACC3Q9Y6A5 838 aa12.82□□□□□ -0.36
SSBP4-215ENST00000625926 TRIOBPQ9H2D6 2365 aa12.82□□□□□ -0.36
SSBP4-215ENST00000625926 KIAA0100Q14667 2235 aaKnown RBP12.82□□□□□ -0.36
SSBP4-215ENST00000625926 ZMYM6O95789 1325 aa12.82□□□□□ -0.36
SSBP4-215ENST00000625926 SEPT4O43236 478 aa12.81□□□□□ -0.36
SSBP4-215ENST00000625926 PCP11498 1178 aaKnown RBP12.81□□□□□ -0.36
SSBP4-215ENST00000625926 NOVP48745 357 aa12.81□□□□□ -0.36
SSBP4-215ENST00000625926 STAT2P52630 851 aa12.81□□□□□ -0.36
SSBP4-215ENST00000625926 IKQ13123 557 aaPredicted RBP12.81□□□□□ -0.36
SSBP4-215ENST00000625926 PRAMEF19Q5SWL8 479 aa12.81□□□□□ -0.36
SSBP4-215ENST00000625926 RCSD1Q6JBY9 416 aa12.81□□□□□ -0.36
SSBP4-215ENST00000625926 CWC27Q6UX04 472 aaKnown RBP12.81□□□□□ -0.36
SSBP4-215ENST00000625926 MFSD6Q6ZSS7 791 aa12.81□□□□□ -0.36
SSBP4-215ENST00000625926 ARRDC4Q8NCT1 418 aa12.81□□□□□ -0.36
SSBP4-215ENST00000625926 DDX11Q96FC9 970 aa12.81□□□□□ -0.36
SSBP4-215ENST00000625926 TINF2Q9BSI4 451 aa12.81□□□□□ -0.36
SSBP4-215ENST00000625926 FBXO40Q9UH90 709 aa12.81□□□□□ -0.36
SSBP4-215ENST00000625926 MGAMO43451 1857 aa12.8□□□□□ -0.36
SSBP4-215ENST00000625926 DNM1LO00429 736 aa12.8□□□□□ -0.36
SSBP4-215ENST00000625926 PLA2G6O60733 806 aa12.8□□□□□ -0.36
SSBP4-215ENST00000625926 HAND2P61296 217 aa12.8□□□□□ -0.36
SSBP4-215ENST00000625926 IRX6P78412 446 aaPredicted RBP12.8□□□□□ -0.36
SSBP4-215ENST00000625926 AKNAD1Q5T1N1 836 aa12.8□□□□□ -0.36
SSBP4-215ENST00000625926 C7orf61Q8IZ16 206 aa12.8□□□□□ -0.36
SSBP4-215ENST00000625926 CHST13Q8NET6 341 aa12.8□□□□□ -0.36
SSBP4-215ENST00000625926 CHMP4CQ96CF2 233 aa12.8□□□□□ -0.36
SSBP4-215ENST00000625926 RNF41Q9H4P4 317 aaPredicted RBP12.8□□□□□ -0.36
SSBP4-215ENST00000625926 TCP11L1Q9NUJ3 509 aa12.8□□□□□ -0.36
SSBP4-215ENST00000625926 PFASO15067 1338 aa12.8□□□□□ -0.36
SSBP4-215ENST00000625926 ZNF213O14771 459 aa12.79□□□□□ -0.36
SSBP4-215ENST00000625926 TOP1P11387 765 aaKnown RBP12.79□□□□□ -0.36
SSBP4-215ENST00000625926 KCTD1Q719H9 257 aa12.79□□□□□ -0.36
SSBP4-215ENST00000625926 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.79□□□□□ -0.368e-7■■■■□ 26.7
SSBP4-215ENST00000625926 ANKRD35Q8N283 1001 aa12.79□□□□□ -0.36
SSBP4-215ENST00000625926 MSL3Q8N5Y2 521 aaKnown RBP12.79□□□□□ -0.36
SSBP4-215ENST00000625926 DCAF4Q8WV16 495 aa12.79□□□□□ -0.36
SSBP4-215ENST00000625926 TTC14Q96N46 770 aa12.79□□□□□ -0.36
SSBP4-215ENST00000625926 SENP6Q9GZR1 1112 aaPredicted RBP12.79□□□□□ -0.36
SSBP4-215ENST00000625926 RBM27Q9P2N5 1060 aaKnown RBP12.79□□□□□ -0.36
SSBP4-215ENST00000625926 CNPY2Q9Y2B0 182 aa12.79□□□□□ -0.36
SSBP4-215ENST00000625926 DNAJC25-GNG10A0A024R161 153 aa12.78□□□□□ -0.36
SSBP4-215ENST00000625926 PDE4AP27815 886 aa12.78□□□□□ -0.36
SSBP4-215ENST00000625926 NT5C2P49902 561 aa12.78□□□□□ -0.36
SSBP4-215ENST00000625926 CCDC96Q2M329 555 aa12.78□□□□□ -0.36
SSBP4-215ENST00000625926 ANO1Q5XXA6 986 aa12.78□□□□□ -0.36
SSBP4-215ENST00000625926 ESR2Q92731 530 aa12.78□□□□□ -0.36
SSBP4-215ENST00000625926 TMEM47Q9BQJ4 181 aa12.78□□□□□ -0.36
SSBP4-215ENST00000625926 PRO3102Q9H379 93 aa12.78□□□□□ -0.36
SSBP4-215ENST00000625926 MTMR7Q9Y216 660 aa12.78□□□□□ -0.36
SSBP4-215ENST00000625926 CENPFP49454 3210 aa12.77□□□□□ -0.36
SSBP4-215ENST00000625926 PLXNB2O15031 1838 aa12.77□□□□□ -0.37
SSBP4-215ENST00000625926 KBTBD13C9JR72 458 aa12.77□□□□□ -0.37
SSBP4-215ENST00000625926 MYCNP04198 464 aaPredicted RBP12.77□□□□□ -0.37
SSBP4-215ENST00000625926 ZNF865P0CJ78 1059 aaPredicted RBP12.77□□□□□ -0.37
SSBP4-215ENST00000625926 RARBP10826 455 aa12.77□□□□□ -0.37
SSBP4-215ENST00000625926 LRRC26Q2I0M4 334 aa12.77□□□□□ -0.37
SSBP4-215ENST00000625926 TKFCQ3LXA3 575 aa12.77□□□□□ -0.37
SSBP4-215ENST00000625926 GJC2Q5T442 439 aaPredicted RBP12.77□□□□□ -0.37
SSBP4-215ENST00000625926 TTC22Q5TAA0 569 aa12.77□□□□□ -0.37
SSBP4-215ENST00000625926 MAMDC4Q6UXC1 1216 aa12.77□□□□□ -0.37
SSBP4-215ENST00000625926 ZNF467Q7Z7K2 595 aaPredicted RBP12.77□□□□□ -0.37
SSBP4-215ENST00000625926 TBC1D10CQ8IV04 446 aa12.77□□□□□ -0.37
SSBP4-215ENST00000625926 AGBL1Q96MI9 1066 aa12.77□□□□□ -0.37
SSBP4-215ENST00000625926 DSCC1Q9BVC3 393 aa12.77□□□□□ -0.37
SSBP4-215ENST00000625926 ACAD9Q9H845 621 aa12.77□□□□□ -0.37
SSBP4-215ENST00000625926 HOMER2Q9NSB8 354 aa12.77□□□□□ -0.37
SSBP4-215ENST00000625926 CTNNA3Q9UI47 895 aa12.77□□□□□ -0.37
SSBP4-215ENST00000625926 PRR12Q9ULL5 1215 aa12.77□□□□□ -0.37
SSBP4-215ENST00000625926 ZMYND8Q9ULU4 1186 aaPredicted RBP12.77□□□□□ -0.37
SSBP4-215ENST00000625926 ZNF536O15090 1300 aa12.77□□□□□ -0.37
SSBP4-215ENST00000625926 BAZ2AQ9UIF9 1905 aaKnown RBP12.76□□□□□ -0.37
SSBP4-215ENST00000625926 UNC80Q8N2C7 3258 aa12.76□□□□□ -0.37
SSBP4-215ENST00000625926 SNAI1O95863 264 aaPredicted RBP12.76□□□□□ -0.37
SSBP4-215ENST00000625926 AKR1A1P14550 325 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms