RNA–Protein interactions for RNA: ENST00000625916.1

SCN1A-208, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 4

Gene SCN1A, Length 560 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-208ENST00000625916 KBTBD4Q9NVX7 518 aa5.5□□□□□ -1.53
SCN1A-208ENST00000625916 RTEL1Q9NZ71 1219 aa5.5□□□□□ -1.53
SCN1A-208ENST00000625916 TNFRSF10DQ9UBN6 386 aa5.5□□□□□ -1.53
SCN1A-208ENST00000625916 SIGLEC6O43699 453 aa5.49□□□□□ -1.53
SCN1A-208ENST00000625916 CLEC3AO75596 197 aa5.49□□□□□ -1.53
SCN1A-208ENST00000625916 POLR2BP30876 1174 aaKnown RBP5.49□□□□□ -1.53
SCN1A-208ENST00000625916 YBX1P67809 324 aaKnown RBP5.49□□□□□ -1.53
SCN1A-208ENST00000625916 VMACQ2NL98 169 aa5.49□□□□□ -1.53
SCN1A-208ENST00000625916 OVOS1Q6IE37 1185 aa5.49□□□□□ -1.53
SCN1A-208ENST00000625916 AEBP1Q8IUX7 1158 aa5.49□□□□□ -1.53
SCN1A-208ENST00000625916 MZB1Q8WU39 189 aa5.49□□□□□ -1.53
SCN1A-208ENST00000625916 ZNF512BQ96KM6 892 aaPredicted RBP5.49□□□□□ -1.53
SCN1A-208ENST00000625916 FCRL2Q96LA5 508 aaPredicted RBP5.49□□□□□ -1.53
SCN1A-208ENST00000625916 PRDM14Q9GZV8 571 aa5.49□□□□□ -1.53
SCN1A-208ENST00000625916 GPR55Q9Y2T6 319 aaPredicted RBP5.49□□□□□ -1.53
SCN1A-208ENST00000625916 ROBO2Q9HCK4 1378 aa5.49□□□□□ -1.53
SCN1A-208ENST00000625916 OTOL1A6NHN0 477 aaPredicted RBP5.48□□□□□ -1.53
SCN1A-208ENST00000625916 WTIPA6NIX2 430 aaPredicted RBP5.48□□□□□ -1.53
SCN1A-208ENST00000625916 MEIS1O00470 390 aa5.48□□□□□ -1.53
SCN1A-208ENST00000625916 CDR1P51861 262 aa5.48□□□□□ -1.53
SCN1A-208ENST00000625916 ERVFRD-1P60508 538 aa5.48□□□□□ -1.53
SCN1A-208ENST00000625916 KIR3DS1Q14943 382 aa5.48□□□□□ -1.53
SCN1A-208ENST00000625916 RAB3GAP1Q15042 981 aa5.48□□□□□ -1.53
SCN1A-208ENST00000625916 HSF5Q4G112 596 aaPredicted RBP5.48□□□□□ -1.53
SCN1A-208ENST00000625916 ERICH6BQ5W0A0 696 aa5.48□□□□□ -1.53
SCN1A-208ENST00000625916 CNKSR3Q6P9H4 555 aa5.48□□□□□ -1.53
SCN1A-208ENST00000625916 FBXL19Q6PCT2 694 aa5.48□□□□□ -1.53
SCN1A-208ENST00000625916 DNAJC14Q6Y2X3 702 aaPredicted RBP5.48□□□□□ -1.53
SCN1A-208ENST00000625916 TMC6Q7Z403 805 aa5.48□□□□□ -1.53
SCN1A-208ENST00000625916 FBXO33Q7Z6M2 555 aa5.48□□□□□ -1.53
SCN1A-208ENST00000625916 FEZF2Q8TBJ5 459 aa5.48□□□□□ -1.53
SCN1A-208ENST00000625916 CDADC1Q9BWV3 514 aa5.48□□□□□ -1.53
SCN1A-208ENST00000625916 XYLT2Q9H1B5 865 aa5.48□□□□□ -1.53
SCN1A-208ENST00000625916 COPRSQ9NQ92 184 aa5.48□□□□□ -1.53
SCN1A-208ENST00000625916 CHST7Q9NS84 486 aa5.48□□□□□ -1.53
SCN1A-208ENST00000625916 MINPP1Q9UNW1 487 aa5.48□□□□□ -1.53
SCN1A-208ENST00000625916 SUPT16HQ9Y5B9 1047 aaKnown RBP5.48□□□□□ -1.53
SCN1A-208ENST00000625916 FADS2P1A8MWK0 482 aa5.47□□□□□ -1.53
SCN1A-208ENST00000625916 ATE1O95260 518 aa5.47□□□□□ -1.53
SCN1A-208ENST00000625916 PRKCAP17252 672 aa5.47□□□□□ -1.53
SCN1A-208ENST00000625916 ENDOUP21128 410 aaKnown RBP5.47□□□□□ -1.53
SCN1A-208ENST00000625916 EIF4A3P38919 411 aaKnown RBP5.47□□□□□ -1.53
SCN1A-208ENST00000625916 TMEM62Q0P6H9 643 aa5.47□□□□□ -1.53
SCN1A-208ENST00000625916 LAPTM5Q13571 262 aa5.47□□□□□ -1.53
SCN1A-208ENST00000625916 CDCP2Q5VXM1 449 aa5.47□□□□□ -1.53
SCN1A-208ENST00000625916 ZDHHC14Q8IZN3 488 aa5.47□□□□□ -1.53
SCN1A-208ENST00000625916 CXorf38Q8TB03 319 aa5.47□□□□□ -1.53
SCN1A-208ENST00000625916 LRRC3Q9BY71 257 aa5.47□□□□□ -1.53
SCN1A-208ENST00000625916 MKRN2Q9H000 416 aaKnown RBP5.47□□□□□ -1.53
SCN1A-208ENST00000625916 EPB41L4AQ9HCS5 686 aaPredicted RBP5.47□□□□□ -1.53
SCN1A-208ENST00000625916 FBXL21Q9UKT6 434 aa5.47□□□□□ -1.53
SCN1A-208ENST00000625916 NUDT19A8MXV4 375 aa5.46□□□□□ -1.54
SCN1A-208ENST00000625916 IRS4O14654 1257 aaPredicted RBP5.46□□□□□ -1.54
SCN1A-208ENST00000625916 CCNFP41002 786 aa5.46□□□□□ -1.54
SCN1A-208ENST00000625916 CYP4F8P98187 520 aa5.46□□□□□ -1.54
SCN1A-208ENST00000625916 TAGLNQ01995 201 aaKnown RBP5.46□□□□□ -1.54
SCN1A-208ENST00000625916 NLRC3Q7RTR2 1065 aa5.46□□□□□ -1.54
SCN1A-208ENST00000625916 LDHDQ86WU2 507 aa5.46□□□□□ -1.54
SCN1A-208ENST00000625916 FAM129CQ86XR2 697 aa5.46□□□□□ -1.54
SCN1A-208ENST00000625916 SP8Q8IXZ3 490 aa5.46□□□□□ -1.54
SCN1A-208ENST00000625916 TMEFF1Q8IYR6 380 aa5.46□□□□□ -1.54
SCN1A-208ENST00000625916 NUP43Q8NFH3 380 aa5.46□□□□□ -1.54
SCN1A-208ENST00000625916 ATG4CQ96DT6 458 aa5.46□□□□□ -1.54
SCN1A-208ENST00000625916 CNNM2Q9H8M5 875 aa5.46□□□□□ -1.54
SCN1A-208ENST00000625916 GFOD1Q9NXC2 390 aa5.46□□□□□ -1.54
SCN1A-208ENST00000625916 KLHL14Q9P2G3 628 aa5.46□□□□□ -1.54
SCN1A-208ENST00000625916 PCDHB12Q9Y5F1 795 aa5.46□□□□□ -1.54
SCN1A-208ENST00000625916 ADAMTS20P59510 1910 aa5.46□□□□□ -1.54
SCN1A-208ENST00000625916 MCM4P33991 863 aa5.45□□□□□ -1.54
SCN1A-208ENST00000625916 SEZ6Q53EL9 994 aa5.45□□□□□ -1.54
SCN1A-208ENST00000625916 DBX2Q6ZNG2 339 aa5.45□□□□□ -1.54
SCN1A-208ENST00000625916 GK5Q6ZS86 529 aa5.45□□□□□ -1.54
SCN1A-208ENST00000625916 ERMP1Q7Z2K6 904 aa5.45□□□□□ -1.54
SCN1A-208ENST00000625916 PRRT2Q7Z6L0 340 aaPredicted RBP5.45□□□□□ -1.54
SCN1A-208ENST00000625916 IGDCC3Q8IVU1 814 aa5.45□□□□□ -1.54
SCN1A-208ENST00000625916 ZNF296Q8WUU4 475 aaPredicted RBP5.45□□□□□ -1.54
SCN1A-208ENST00000625916 PWWP2AQ96N64 755 aa5.45□□□□□ -1.54
SCN1A-208ENST00000625916 EHMT1Q9H9B1 1298 aa5.45□□□□□ -1.54
SCN1A-208ENST00000625916 ERVK13-1Q9NX77 482 aa5.45□□□□□ -1.54
SCN1A-208ENST00000625916 JAG2Q9Y219 1238 aa5.45□□□□□ -1.54
SCN1A-208ENST00000625916 A0A1W2PQ27 194 aa5.44□□□□□ -1.54
SCN1A-208ENST00000625916 A0A1W2PQ45 241 aaPredicted RBP5.44□□□□□ -1.54
SCN1A-208ENST00000625916 A0A1W2PQ64 194 aa5.44□□□□□ -1.54
SCN1A-208ENST00000625916 A0A1W2PQC6 194 aa5.44□□□□□ -1.54
SCN1A-208ENST00000625916 A0A1W2PQD8 194 aa5.44□□□□□ -1.54
SCN1A-208ENST00000625916 A0A1W2PQY0 241 aa5.44□□□□□ -1.54
SCN1A-208ENST00000625916 GREM1O60565 184 aa5.44□□□□□ -1.54
SCN1A-208ENST00000625916 CELA3BP08861 270 aa5.44□□□□□ -1.54
SCN1A-208ENST00000625916 BMP8BP34820 402 aa5.44□□□□□ -1.54
SCN1A-208ENST00000625916 CRKP46108 304 aa5.44□□□□□ -1.54
SCN1A-208ENST00000625916 NCKAP1LP55160 1127 aa5.44□□□□□ -1.54
SCN1A-208ENST00000625916 CLCQ05315 142 aa5.44□□□□□ -1.54
SCN1A-208ENST00000625916 SKOR2Q2VWA4 1001 aaPredicted RBP5.44□□□□□ -1.54
SCN1A-208ENST00000625916 SLCO6A1Q86UG4 719 aa5.44□□□□□ -1.54
SCN1A-208ENST00000625916 SYT8Q8NBV8 401 aa5.44□□□□□ -1.54
SCN1A-208ENST00000625916 SLC6A18Q96N87 628 aa5.44□□□□□ -1.54
SCN1A-208ENST00000625916 KCNQ5Q9NR82 932 aa5.44□□□□□ -1.54
SCN1A-208ENST00000625916 BUB1BO60566 1050 aaPredicted RBP5.43□□□□□ -1.54
SCN1A-208ENST00000625916 ZNF205O95201 554 aa5.43□□□□□ -1.54
SCN1A-208ENST00000625916 APOBRQ0VD83 1088 aa5.43□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms