RNA–Protein interactions for RNA: ENST00000625705.1

NPLOC4-221, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5 BASIC

Gene NPLOC4, Length 405 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-221ENST00000625705 WDR18Q9BV38 432 aa8.55□□□□□ -1.04
NPLOC4-221ENST00000625705 DSCC1Q9BVC3 393 aa8.55□□□□□ -1.04
NPLOC4-221ENST00000625705 TANGO6Q9C0B7 1094 aa8.55□□□□□ -1.04
NPLOC4-221ENST00000625705 SLC6A16Q9GZN6 736 aa8.55□□□□□ -1.04
NPLOC4-221ENST00000625705 RNF41Q9H4P4 317 aaPredicted RBP8.55□□□□□ -1.04
NPLOC4-221ENST00000625705 KANSL2Q9H9L4 492 aa8.55□□□□□ -1.04
NPLOC4-221ENST00000625705 GOPCQ9HD26 462 aa8.55□□□□□ -1.04
NPLOC4-221ENST00000625705 ZCCHC17Q9NP64 241 aaKnown RBP8.55□□□□□ -1.04
NPLOC4-221ENST00000625705 AGTPBP1Q9UPW5 1226 aa8.55□□□□□ -1.04
NPLOC4-221ENST00000625705 LOC285556D6RIA3 1793 aa8.55□□□□□ -1.04
NPLOC4-221ENST00000625705 ZMYM6O95789 1325 aa8.54□□□□□ -1.04
NPLOC4-221ENST00000625705 LAMA4Q16363 1823 aa8.54□□□□□ -1.04
NPLOC4-221ENST00000625705 GPR25O00155 361 aa8.54□□□□□ -1.04
NPLOC4-221ENST00000625705 FKTNO75072 461 aa8.54□□□□□ -1.04
NPLOC4-221ENST00000625705 RASA1P20936 1047 aa8.54□□□□□ -1.04
NPLOC4-221ENST00000625705 JAG1P78504 1218 aa8.54□□□□□ -1.04
NPLOC4-221ENST00000625705 ALX1Q15699 326 aa8.54□□□□□ -1.04
NPLOC4-221ENST00000625705 LIAT1Q6ZQX7 453 aa8.54□□□□□ -1.04
NPLOC4-221ENST00000625705 MFSD6Q6ZSS7 791 aa8.54□□□□□ -1.04
NPLOC4-221ENST00000625705 CCAR1Q8IX12 1150 aaKnown RBP8.54□□□□□ -1.04
NPLOC4-221ENST00000625705 PTPN18Q99952 460 aa8.54□□□□□ -1.04
NPLOC4-221ENST00000625705 KIAA1683Q9H0B3 1180 aa8.54□□□□□ -1.04
NPLOC4-221ENST00000625705 CWC22Q9HCG8 908 aaKnown RBP8.54□□□□□ -1.04
NPLOC4-221ENST00000625705 ANO2Q9NQ90 1003 aa8.54□□□□□ -1.04
NPLOC4-221ENST00000625705 PRDM10Q9NQV6 1147 aa8.54□□□□□ -1.04
NPLOC4-221ENST00000625705 FOXP2O15409 715 aa8.53□□□□□ -1.04
NPLOC4-221ENST00000625705 SGSM2O43147 1006 aa8.53□□□□□ -1.04
NPLOC4-221ENST00000625705 CYP2C8P10632 490 aa8.53□□□□□ -1.04
NPLOC4-221ENST00000625705 PCP11498 1178 aaKnown RBP8.53□□□□□ -1.04
NPLOC4-221ENST00000625705 EEF2P13639 858 aaKnown RBP8.53□□□□□ -1.04
NPLOC4-221ENST00000625705 TFAP4Q01664 338 aa8.53□□□□□ -1.04
NPLOC4-221ENST00000625705 FUT2Q10981 343 aa8.53□□□□□ -1.04
NPLOC4-221ENST00000625705 TRDNQ13061 729 aa8.53□□□□□ -1.04
NPLOC4-221ENST00000625705 DGKZQ13574 1117 aa8.53□□□□□ -1.04
NPLOC4-221ENST00000625705 ARHGEF6Q15052 776 aa8.53□□□□□ -1.04
NPLOC4-221ENST00000625705 FAM47AQ5JRC9 791 aa8.53□□□□□ -1.04
NPLOC4-221ENST00000625705 TREML2Q5T2D2 321 aa8.53□□□□□ -1.04
NPLOC4-221ENST00000625705 RALYLQ86SE5 291 aaKnown RBP8.53□□□□□ -1.04
NPLOC4-221ENST00000625705 ACER1Q8TDN7 264 aa8.53□□□□□ -1.04
NPLOC4-221ENST00000625705 ERO1AQ96HE7 468 aa8.53□□□□□ -1.04
NPLOC4-221ENST00000625705 SPSB2Q99619 263 aa8.53□□□□□ -1.04
NPLOC4-221ENST00000625705 CPA4Q9UI42 421 aa8.53□□□□□ -1.04
NPLOC4-221ENST00000625705 STX8Q9UNK0 236 aa8.53□□□□□ -1.04
NPLOC4-221ENST00000625705 MTMR7Q9Y216 660 aa8.53□□□□□ -1.04
NPLOC4-221ENST00000625705 SLC45A1Q9Y2W3 748 aa8.53□□□□□ -1.04
NPLOC4-221ENST00000625705 TLR2O60603 784 aa8.52□□□□□ -1.05
NPLOC4-221ENST00000625705 TTLL1O95922 423 aa8.52□□□□□ -1.05
NPLOC4-221ENST00000625705 VCAM1P19320 739 aa8.52□□□□□ -1.05
NPLOC4-221ENST00000625705 GCGRP47871 477 aa8.52□□□□□ -1.05
NPLOC4-221ENST00000625705 SP3Q02447 781 aa8.52□□□□□ -1.05
NPLOC4-221ENST00000625705 IKQ13123 557 aaPredicted RBP8.52□□□□□ -1.05
NPLOC4-221ENST00000625705 SH3D19Q5HYK7 790 aa8.52□□□□□ -1.05
NPLOC4-221ENST00000625705 MORN1Q5T089 497 aa8.52□□□□□ -1.05
NPLOC4-221ENST00000625705 AKNAD1Q5T1N1 836 aa8.52□□□□□ -1.05
NPLOC4-221ENST00000625705 GPAT2Q6NUI2 795 aa8.52□□□□□ -1.05
NPLOC4-221ENST00000625705 TRIM67Q6ZTA4 783 aa8.52□□□□□ -1.05
NPLOC4-221ENST00000625705 TNS4Q8IZW8 715 aa8.52□□□□□ -1.05
NPLOC4-221ENST00000625705 SPICE1Q8N0Z3 855 aa8.52□□□□□ -1.05
NPLOC4-221ENST00000625705 LRRC47Q8N1G4 583 aaKnown RBP8.52□□□□□ -1.05
NPLOC4-221ENST00000625705 ZNF296Q8WUU4 475 aaPredicted RBP8.52□□□□□ -1.05
NPLOC4-221ENST00000625705 LPAR1Q92633 364 aa8.52□□□□□ -1.05
NPLOC4-221ENST00000625705 ESR2Q92731 530 aa8.52□□□□□ -1.05
NPLOC4-221ENST00000625705 ESYT1Q9BSJ8 1104 aa8.52□□□□□ -1.05
NPLOC4-221ENST00000625705 RPAP3Q9H6T3 665 aaPredicted RBP8.52□□□□□ -1.05
NPLOC4-221ENST00000625705 CNNM2Q9H8M5 875 aa8.52□□□□□ -1.05
NPLOC4-221ENST00000625705 CLIP2Q9UDT6 1046 aa8.52□□□□□ -1.05
NPLOC4-221ENST00000625705 ANAPC4Q9UJX5 808 aa8.52□□□□□ -1.05
NPLOC4-221ENST00000625705 CTDP1Q9Y5B0 961 aaPredicted RBP8.52□□□□□ -1.05
NPLOC4-221ENST00000625705 MYH4Q9Y623 1939 aa8.52□□□□□ -1.05
NPLOC4-221ENST00000625705 B4E1Z4 1266 aa8.51□□□□□ -1.05
NPLOC4-221ENST00000625705 USP17L15C9J2P7 530 aa8.51□□□□□ -1.05
NPLOC4-221ENST00000625705 USP17L13C9JLJ4 530 aa8.51□□□□□ -1.05
NPLOC4-221ENST00000625705 USP17L11C9JVI0 530 aa8.51□□□□□ -1.05
NPLOC4-221ENST00000625705 USP17L18D6R9N7 530 aa8.51□□□□□ -1.05
NPLOC4-221ENST00000625705 USP17L22D6RA61 530 aa8.51□□□□□ -1.05
NPLOC4-221ENST00000625705 USP17L17D6RBQ6 530 aa8.51□□□□□ -1.05
NPLOC4-221ENST00000625705 USP17L19D6RCP7 530 aa8.51□□□□□ -1.05
NPLOC4-221ENST00000625705 USP17L20D6RJB6 530 aa8.51□□□□□ -1.05
NPLOC4-221ENST00000625705 ORC4O43929 436 aa8.51□□□□□ -1.05
NPLOC4-221ENST00000625705 GUCY1A2P33402 732 aa8.51□□□□□ -1.05
NPLOC4-221ENST00000625705 GCLCP48506 637 aaPredicted RBP8.51□□□□□ -1.05
NPLOC4-221ENST00000625705 USP17L24Q0WX57 530 aa8.51□□□□□ -1.05
NPLOC4-221ENST00000625705 RNF20Q5VTR2 975 aa8.51□□□□□ -1.05
NPLOC4-221ENST00000625705 IQCA1Q86XH1 822 aa8.51□□□□□ -1.05
NPLOC4-221ENST00000625705 TBC1D10CQ8IV04 446 aa8.51□□□□□ -1.05
NPLOC4-221ENST00000625705 ANKRD13CQ8N6S4 541 aa8.51□□□□□ -1.05
NPLOC4-221ENST00000625705 NEDD1Q8NHV4 660 aa8.51□□□□□ -1.05
NPLOC4-221ENST00000625705 CD99L2Q8TCZ2 262 aa8.51□□□□□ -1.05
NPLOC4-221ENST00000625705 STAG1Q8WVM7 1258 aa8.51□□□□□ -1.05
NPLOC4-221ENST00000625705 CEP95Q96GE4 821 aa8.51□□□□□ -1.05
NPLOC4-221ENST00000625705 UBAC1Q9BSL1 405 aa8.51□□□□□ -1.05
NPLOC4-221ENST00000625705 PAGR1Q9BTK6 254 aa8.51□□□□□ -1.05
NPLOC4-221ENST00000625705 CFHR5Q9BXR6 569 aa8.51□□□□□ -1.05
NPLOC4-221ENST00000625705 KRT23Q9C075 422 aa8.51□□□□□ -1.05
NPLOC4-221ENST00000625705 ASCC2Q9H1I8 757 aaPredicted RBP8.51□□□□□ -1.05
NPLOC4-221ENST00000625705 IL25Q9H293 177 aa8.51□□□□□ -1.05
NPLOC4-221ENST00000625705 R3HDMLQ9H3Y0 253 aa8.51□□□□□ -1.05
NPLOC4-221ENST00000625705 VCPKMTQ9H867 229 aa8.51□□□□□ -1.05
NPLOC4-221ENST00000625705 INCENPQ9NQS7 918 aa8.51□□□□□ -1.05
NPLOC4-221ENST00000625705 TMX2Q9Y320 296 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms