RNA–Protein interactions for RNA: ENST00000625617.2

TUBB3-215, Transcript of tubulin beta 3 class III, humanhuman

TSL 4 BASIC

Gene TUBB3, Length 570 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-215ENST00000625617 TRIM43BA6NCK2 446 aa17.28■□□□□ 0.36
TUBB3-215ENST00000625617 CLTBP09497 229 aa17.28■□□□□ 0.36
TUBB3-215ENST00000625617 LRRFIP1Q32MZ4 808 aaKnown RBP17.28■□□□□ 0.36
TUBB3-215ENST00000625617 SH3RF1Q7Z6J0 888 aa17.28■□□□□ 0.36
TUBB3-215ENST00000625617 PRPF38AQ8NAV1 312 aaKnown RBP17.28■□□□□ 0.36
TUBB3-215ENST00000625617 TRIM43Q96BQ3 446 aaPredicted RBP17.28■□□□□ 0.36
TUBB3-215ENST00000625617 DDX11Q96FC9 970 aa17.28■□□□□ 0.36
TUBB3-215ENST00000625617 TACC3Q9Y6A5 838 aa17.28■□□□□ 0.36
TUBB3-215ENST00000625617 GREB1LQ9C091 1923 aaPredicted RBP17.27■□□□□ 0.36
TUBB3-215ENST00000625617 IGKV6D-41A0A0C4DH26 115 aa17.27■□□□□ 0.36
TUBB3-215ENST00000625617 M0R2C6 588 aa17.27■□□□□ 0.36
TUBB3-215ENST00000625617 ATP2A1O14983 1001 aa17.27■□□□□ 0.36
TUBB3-215ENST00000625617 PQBP1O60828 265 aaKnown RBP17.27■□□□□ 0.36
TUBB3-215ENST00000625617 APPP05067 770 aa17.27■□□□□ 0.36
TUBB3-215ENST00000625617 ZNF444Q8N0Y2 327 aaPredicted RBP17.27■□□□□ 0.36
TUBB3-215ENST00000625617 CPXCR1Q8N123 301 aa17.27■□□□□ 0.36
TUBB3-215ENST00000625617 KIFC2Q96AC6 838 aa17.27■□□□□ 0.36
TUBB3-215ENST00000625617 CEP95Q96GE4 821 aa17.27■□□□□ 0.36
TUBB3-215ENST00000625617 DCTPP1Q9H773 170 aa17.27■□□□□ 0.36
TUBB3-215ENST00000625617 CLIP2Q9UDT6 1046 aa17.27■□□□□ 0.36
TUBB3-215ENST00000625617 ZHX1Q9UKY1 873 aaPredicted RBP17.27■□□□□ 0.36
TUBB3-215ENST00000625617 SYNRGQ9UMZ2 1314 aa17.26■□□□□ 0.35
TUBB3-215ENST00000625617 DNAJC25-GNG10A0A024R161 153 aa17.26■□□□□ 0.35
TUBB3-215ENST00000625617 ZBED4O75132 1171 aa17.26■□□□□ 0.35
TUBB3-215ENST00000625617 ADAMTS4O75173 837 aa17.26■□□□□ 0.35
TUBB3-215ENST00000625617 PRDM1O75626 825 aa17.26■□□□□ 0.35
TUBB3-215ENST00000625617 SLC4A3P48751 1232 aa17.26■□□□□ 0.35
TUBB3-215ENST00000625617 LRRC47Q8N1G4 583 aaKnown RBP17.26■□□□□ 0.35
TUBB3-215ENST00000625617 FAM184BQ9ULE4 1060 aa17.26■□□□□ 0.35
TUBB3-215ENST00000625617 SYNPO2Q9UMS6 1093 aa17.26■□□□□ 0.35
TUBB3-215ENST00000625617 RIPK3Q9Y572 518 aa17.26■□□□□ 0.35
TUBB3-215ENST00000625617 PLIN4Q96Q06 1357 aa17.26■□□□□ 0.35
TUBB3-215ENST00000625617 TTLL1O95922 423 aa17.25■□□□□ 0.35
TUBB3-215ENST00000625617 RAG1P15918 1043 aa17.25■□□□□ 0.35
TUBB3-215ENST00000625617 SMAD3P84022 425 aaKnown RBP17.25■□□□□ 0.35
TUBB3-215ENST00000625617 MAMDC4Q6UXC1 1216 aa17.25■□□□□ 0.35
TUBB3-215ENST00000625617 ZNF467Q7Z7K2 595 aaPredicted RBP17.25■□□□□ 0.35
TUBB3-215ENST00000625617 NUP133Q8WUM0 1156 aa17.25■□□□□ 0.35
TUBB3-215ENST00000625617 TSEN34Q9BSV6 310 aaKnown RBP17.25■□□□□ 0.35
TUBB3-215ENST00000625617 NACAP1Q9BZK3 213 aa17.25■□□□□ 0.35
TUBB3-215ENST00000625617 SLC38A10Q9HBR0 1119 aa17.25■□□□□ 0.35
TUBB3-215ENST00000625617 RAVER2Q9HCJ3 691 aaKnown RBP17.25■□□□□ 0.35
TUBB3-215ENST00000625617 STARD7Q9NQZ5 370 aa17.25■□□□□ 0.35
TUBB3-215ENST00000625617 MTMR4Q9NYA4 1195 aa17.25■□□□□ 0.35
TUBB3-215ENST00000625617 FEM1BQ9UK73 627 aa17.25■□□□□ 0.35
TUBB3-215ENST00000625617 COL11A1P12107 1806 aaPredicted RBP17.25■□□□□ 0.35
TUBB3-215ENST00000625617 DNAH12Q6ZR08 3092 aa17.25■□□□□ 0.35
TUBB3-215ENST00000625617 MOXD2PA6NHM9 499 aa17.24■□□□□ 0.35
TUBB3-215ENST00000625617 KIAA0355O15063 1070 aa17.24■□□□□ 0.35
TUBB3-215ENST00000625617 SNAI1O95863 264 aaPredicted RBP17.24■□□□□ 0.35
TUBB3-215ENST00000625617 ITGB8P26012 769 aa17.24■□□□□ 0.35
TUBB3-215ENST00000625617 ACLYP53396 1101 aa17.24■□□□□ 0.35
TUBB3-215ENST00000625617 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.24■□□□□ 0.35
TUBB3-215ENST00000625617 PHF6Q8IWS0 365 aaKnown RBP eCLIP17.24■□□□□ 0.35
TUBB3-215ENST00000625617 GMCL1P1Q8NEA9 526 aa17.24■□□□□ 0.35
TUBB3-215ENST00000625617 RNPC3Q96LT9 517 aaKnown RBP17.24■□□□□ 0.35
TUBB3-215ENST00000625617 FBXO40Q9UH90 709 aa17.24■□□□□ 0.35
TUBB3-215ENST00000625617 ISY1Q9ULR0 285 aaKnown RBP17.24■□□□□ 0.35
TUBB3-215ENST00000625617 TTC41PQ6P2S7 1318 aa17.23■□□□□ 0.35
TUBB3-215ENST00000625617 ERC2O15083 957 aa17.23■□□□□ 0.35
TUBB3-215ENST00000625617 SLC3A2P08195 630 aaKnown RBP17.23■□□□□ 0.35
TUBB3-215ENST00000625617 TSPY3P0CV98 308 aa17.23■□□□□ 0.35
TUBB3-215ENST00000625617 TSPY8P0CW00 308 aa17.23■□□□□ 0.35
TUBB3-215ENST00000625617 OAZ1P54368 228 aa17.23■□□□□ 0.35
TUBB3-215ENST00000625617 PDE4BQ07343 736 aa17.23■□□□□ 0.35
TUBB3-215ENST00000625617 IFNL3Q8IZI9 196 aa17.23■□□□□ 0.35
TUBB3-215ENST00000625617 ANKRD35Q8N283 1001 aa17.23■□□□□ 0.35
TUBB3-215ENST00000625617 CHST13Q8NET6 341 aa17.23■□□□□ 0.35
TUBB3-215ENST00000625617 MKL1Q969V6 931 aa17.23■□□□□ 0.35
TUBB3-215ENST00000625617 FSD1Q9BTV5 496 aa17.23■□□□□ 0.35
TUBB3-215ENST00000625617 NAPBQ9H115 298 aa17.23■□□□□ 0.35
TUBB3-215ENST00000625617 TMEM39AQ9NV64 488 aa17.23■□□□□ 0.35
TUBB3-215ENST00000625617 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.23■□□□□ 0.35
TUBB3-215ENST00000625617 DCDC2CA8MYV0 355 aa17.22■□□□□ 0.35
TUBB3-215ENST00000625617 PATL2C9JE40 543 aaKnown RBP17.22■□□□□ 0.35
TUBB3-215ENST00000625617 DUSP11O75319 330 aaKnown RBP17.22■□□□□ 0.35
TUBB3-215ENST00000625617 FPGSQ05932 587 aa17.22■□□□□ 0.35
TUBB3-215ENST00000625617 ACVR2BQ13705 512 aa17.22■□□□□ 0.35
TUBB3-215ENST00000625617 SLFN13Q68D06 897 aa17.22■□□□□ 0.35
TUBB3-215ENST00000625617 ANKRD33Q7Z3H0 272 aa17.22■□□□□ 0.35
TUBB3-215ENST00000625617 KLHDC9Q8NEP7 349 aa17.22■□□□□ 0.35
TUBB3-215ENST00000625617 TOX2Q96NM4 488 aa17.22■□□□□ 0.35
TUBB3-215ENST00000625617 CDX2Q99626 313 aaPredicted RBP17.22■□□□□ 0.35
TUBB3-215ENST00000625617 SPC25Q9HBM1 224 aa17.22■□□□□ 0.35
TUBB3-215ENST00000625617 HOMER2Q9NSB8 354 aa17.22■□□□□ 0.35
TUBB3-215ENST00000625617 MYADML2A6NDP7 307 aa17.21■□□□□ 0.35
TUBB3-215ENST00000625617 C6orf222P0C671 652 aaPredicted RBP17.21■□□□□ 0.35
TUBB3-215ENST00000625617 FDX1P10109 184 aa17.21■□□□□ 0.35
TUBB3-215ENST00000625617 BMP3P12645 472 aa17.21■□□□□ 0.35
TUBB3-215ENST00000625617 CST5P28325 142 aaPredicted RBP17.21■□□□□ 0.35
TUBB3-215ENST00000625617 STAT2P52630 851 aa17.21■□□□□ 0.35
TUBB3-215ENST00000625617 EPHB4P54760 987 aa17.21■□□□□ 0.35
TUBB3-215ENST00000625617 PPARAQ07869 468 aa17.21■□□□□ 0.35
TUBB3-215ENST00000625617 IKQ13123 557 aaPredicted RBP17.21■□□□□ 0.35
TUBB3-215ENST00000625617 KCNA10Q16322 511 aa17.21■□□□□ 0.35
TUBB3-215ENST00000625617 ARMCX2Q7L311 632 aa17.21■□□□□ 0.35
TUBB3-215ENST00000625617 NEDD1Q8NHV4 660 aa17.21■□□□□ 0.35
TUBB3-215ENST00000625617 PI4K2BQ8TCG2 481 aa17.21■□□□□ 0.35
TUBB3-215ENST00000625617 FGD4Q96M96 766 aa17.21■□□□□ 0.35
TUBB3-215ENST00000625617 GLT1D1Q96MS3 346 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms